RNA–Protein interactions for RNA: ENST00000541836.5

NPIPA1-206, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 2,747 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-206ENST00000541836 MADDQ8WXG6 1647 aa17.3■□□□□ 0.36
NPIPA1-206ENST00000541836 DDX11L8A8MPP1 907 aa17.3■□□□□ 0.36
NPIPA1-206ENST00000541836 CARD14Q9BXL6 1004 aa17.3■□□□□ 0.36
NPIPA1-206ENST00000541836 HSCBQ8IWL3 235 aa17.29■□□□□ 0.36
NPIPA1-206ENST00000541836 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
NPIPA1-206ENST00000541836 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
NPIPA1-206ENST00000541836 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
NPIPA1-206ENST00000541836 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
NPIPA1-206ENST00000541836 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
NPIPA1-206ENST00000541836 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
NPIPA1-206ENST00000541836 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 MVPQ14764 893 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 ISY1Q9ULR0 285 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 MAST1Q9Y2H9 1570 aa17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 KDM5AP29375 1690 aaKnown RBP17.25■□□□□ 0.35
NPIPA1-206ENST00000541836 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
NPIPA1-206ENST00000541836 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
NPIPA1-206ENST00000541836 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
NPIPA1-206ENST00000541836 DUOX2Q9NRD8 1548 aa17.22■□□□□ 0.35
NPIPA1-206ENST00000541836 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
NPIPA1-206ENST00000541836 MORC1Q86VD1 984 aa17.21■□□□□ 0.35
NPIPA1-206ENST00000541836 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
NPIPA1-206ENST00000541836 EFCAB2Q5VUJ9 269 aa17.2■□□□□ 0.34
NPIPA1-206ENST00000541836 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
NPIPA1-206ENST00000541836 CEP152O94986 1710 aa17.2■□□□□ 0.34
NPIPA1-206ENST00000541836 ERVK-7P63135 1459 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 DDIT3P35638 169 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
NPIPA1-206ENST00000541836 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 STAC3Q96MF2 364 aa17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
NPIPA1-206ENST00000541836 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
NPIPA1-206ENST00000541836 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
NPIPA1-206ENST00000541836 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
NPIPA1-206ENST00000541836 IQSEC2Q5JU85 1478 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 TPM2P07951 284 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
NPIPA1-206ENST00000541836 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 ZCCHC11Q5TAX3 1644 aaKnown RBP17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 SMC5Q8IY18 1101 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 SNX21Q969T3 373 aa17.15■□□□□ 0.34
NPIPA1-206ENST00000541836 RBM25P49756 843 aaKnown RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 SKOR2Q2VWA4 1001 aaPredicted RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 PLCH2O75038 1416 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 TRIM27P14373 513 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 MTHFSP49914 203 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 RAB3GAP1Q15042 981 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 KIAA1211Q6ZU35 1233 aa17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
NPIPA1-206ENST00000541836 TRPM2O94759 1503 aa17.13■□□□□ 0.33
NPIPA1-206ENST00000541836 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
NPIPA1-206ENST00000541836 KANK1Q14678 1352 aa17.12■□□□□ 0.33
NPIPA1-206ENST00000541836 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 SLC12A5Q9H2X9 1139 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 U2AF1L5P0DN76 240 aaPredicted RBP17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 NASPP49321 788 aaPredicted RBP17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 U2AF1Q01081 240 aaKnown RBP eCLIP17.11■□□□□ 0.339e-7■□□□□ 9.2
NPIPA1-206ENST00000541836 CCDC173Q0VFZ6 552 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 PDCL3Q9H2J4 239 aa17.11■□□□□ 0.33
NPIPA1-206ENST00000541836 EXOSC9Q06265 439 aaKnown RBP17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
NPIPA1-206ENST00000541836 ATF7IPQ6VMQ6 1270 aa17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 ANP32BQ92688 251 aaKnown RBP17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 CD2BP2O95400 341 aaKnown RBP17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 PTMSP20962 102 aa17.09■□□□□ 0.33
NPIPA1-206ENST00000541836 PTPRTO14522 1441 aa17.08■□□□□ 0.33
NPIPA1-206ENST00000541836 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.33
NPIPA1-206ENST00000541836 ZSCAN30Q86W11 494 aa17.08■□□□□ 0.33
NPIPA1-206ENST00000541836 TMEM57Q8N5G2 664 aa17.08■□□□□ 0.32
NPIPA1-206ENST00000541836 PPP1R9BQ96SB3 815 aa17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 SSFA2P28290 1259 aa17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 ABCC1P33527 1531 aa17.07■□□□□ 0.32
NPIPA1-206ENST00000541836 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 NUCB1Q02818 461 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 KIF2CQ99661 725 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 ZNF518AQ6AHZ1 1483 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
NPIPA1-206ENST00000541836 K7ELQ4 463 aaPredicted RBP17.05■□□□□ 0.32
NPIPA1-206ENST00000541836 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
NPIPA1-206ENST00000541836 CHD1LQ86WJ1 897 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms