RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 KNDC1Q76NI1 1749 aa38.7■■■■□ 3.79
CCM2-218ENST00000541586 FAM135BQ49AJ0 1406 aa38.69■■■■□ 3.78
CCM2-218ENST00000541586 DLC1Q96QB1 1528 aa38.68■■■■□ 3.78
CCM2-218ENST00000541586 EIF3AQ14152 1382 aaKnown RBP38.68■■■■□ 3.78
CCM2-218ENST00000541586 CENPJQ9HC77 1338 aaPredicted RBP38.68■■■■□ 3.78
CCM2-218ENST00000541586 KIF7Q2M1P5 1343 aa38.66■■■■□ 3.78
CCM2-218ENST00000541586 MINK1Q8N4C8 1332 aaPredicted RBP38.66■■■■□ 3.78
CCM2-218ENST00000541586 ARHGEF28Q8N1W1 1705 aaKnown RBP38.65■■■■□ 3.78
CCM2-218ENST00000541586 MIER1Q8N108 512 aa38.63■■■■□ 3.77
CCM2-218ENST00000541586 CERKQ8TCT0 537 aa38.59■■■■□ 3.77
CCM2-218ENST00000541586 C19orf44Q9H6X5 657 aa38.59■■■■□ 3.77
CCM2-218ENST00000541586 NCOA3Q9Y6Q9 1424 aa38.55■■■■□ 3.76
CCM2-218ENST00000541586 TESK2Q96S53 571 aa38.55■■■■□ 3.76
CCM2-218ENST00000541586 MSH6P52701 1360 aa38.55■■■■□ 3.76
CCM2-218ENST00000541586 XIRP1Q702N8 1843 aaKnown RBP38.54■■■■□ 3.76
CCM2-218ENST00000541586 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.54■■■■□ 3.76
CCM2-218ENST00000541586 ADGRL3Q9HAR2 1447 aa38.52■■■■□ 3.76
CCM2-218ENST00000541586 ATF3P18847 181 aa38.51■■■■□ 3.76
CCM2-218ENST00000541586 NUTM2FA1L443 756 aa38.49■■■■□ 3.75
CCM2-218ENST00000541586 QRICH2Q9H0J4 1663 aa38.48■■■■□ 3.75
CCM2-218ENST00000541586 NALCNQ8IZF0 1738 aa38.47■■■■□ 3.75
CCM2-218ENST00000541586 WASLO00401 505 aaPredicted RBP38.45■■■■□ 3.75
CCM2-218ENST00000541586 POLR3GLQ9BT43 218 aa38.45■■■■□ 3.75
CCM2-218ENST00000541586 CADPS2Q86UW7 1296 aa38.44■■■■□ 3.74
CCM2-218ENST00000541586 CDK19Q9BWU1 502 aa38.43■■■■□ 3.74
CCM2-218ENST00000541586 DISP3Q9P2K9 1392 aa38.42■■■■□ 3.74
CCM2-218ENST00000541586 EVC2Q86UK5 1308 aa38.41■■■■□ 3.74
CCM2-218ENST00000541586 SRPK2P78362 688 aaKnown RBP38.41■■■■□ 3.74
CCM2-218ENST00000541586 TMF1P82094 1093 aa38.4■■■■□ 3.74
CCM2-218ENST00000541586 CABP2Q9NPB3 220 aa38.39■■■■□ 3.74
CCM2-218ENST00000541586 UBAP1LF5GYI3 381 aa38.37■■■■□ 3.73
CCM2-218ENST00000541586 SBNO2Q9Y2G9 1366 aa38.36■■■■□ 3.73
CCM2-218ENST00000541586 SLC24A1O60721 1099 aa38.35■■■■□ 3.73
CCM2-218ENST00000541586 TOM1O60784 492 aa38.35■■■■□ 3.73
CCM2-218ENST00000541586 SLAIN2Q9P270 581 aa38.35■■■■□ 3.73
CCM2-218ENST00000541586 DCCP43146 1447 aa38.34■■■■□ 3.73
CCM2-218ENST00000541586 IQSEC2Q5JU85 1478 aa38.32■■■■□ 3.72
CCM2-218ENST00000541586 ADGRB2O60241 1585 aa38.31■■■■□ 3.72
CCM2-218ENST00000541586 CDC42BPGQ6DT37 1551 aa38.31■■■■□ 3.72
CCM2-218ENST00000541586 TULP4Q9NRJ4 1543 aa38.3■■■■□ 3.72
CCM2-218ENST00000541586 ANP32CO43423 234 aa38.29■■■■□ 3.72
CCM2-218ENST00000541586 PIP4K2BP78356 416 aa38.29■■■■□ 3.72
CCM2-218ENST00000541586 NUDT16Q96DE0 195 aaKnown RBP38.29■■■■□ 3.72
CCM2-218ENST00000541586 SCAF1Q9H7N4 1312 aaKnown RBP38.28■■■■□ 3.72
CCM2-218ENST00000541586 ESCO1Q5FWF5 840 aa38.26■■■■□ 3.72
CCM2-218ENST00000541586 MST1RQ04912 1400 aa38.25■■■■□ 3.71
CCM2-218ENST00000541586 PRR36Q9H6K5 1346 aa38.25■■■■□ 3.71
CCM2-218ENST00000541586 ORAI2Q96SN7 254 aa38.24■■■■□ 3.71
CCM2-218ENST00000541586 C1orf167Q5SNV9 1468 aa38.23■■■■□ 3.71
CCM2-218ENST00000541586 CDCA8Q53HL2 280 aa38.22■■■■□ 3.71
CCM2-218ENST00000541586 FMN2Q9NZ56 1722 aa38.22■■■■□ 3.71
CCM2-218ENST00000541586 CCDC61Q9Y6R9 512 aa38.2■■■■□ 3.71
CCM2-218ENST00000541586 PMFBP1Q8TBY8 1022 aa38.19■■■■□ 3.7
CCM2-218ENST00000541586 TMC1Q8TDI8 760 aa38.18■■■■□ 3.7
CCM2-218ENST00000541586 RGPD8O14715 1765 aaPredicted RBP38.16■■■■□ 3.7
CCM2-218ENST00000541586 CABP1Q9NZU7 370 aa38.15■■■■□ 3.7
CCM2-218ENST00000541586 ANKARQ7Z5J8 1434 aa38.15■■■■□ 3.7
CCM2-218ENST00000541586 BRINP3Q76B58 766 aa38.15■■■■□ 3.7
CCM2-218ENST00000541586 ATP7BP35670 1465 aa38.14■■■■□ 3.7
CCM2-218ENST00000541586 ATAD2Q6PL18 1390 aa38.13■■■■□ 3.7
CCM2-218ENST00000541586 PHF8Q9UPP1 1060 aa38.13■■■■□ 3.69
CCM2-218ENST00000541586 USP32Q8NFA0 1604 aa38.13■■■■□ 3.69
CCM2-218ENST00000541586 PUS7Q96PZ0 661 aaKnown RBP38.12■■■■□ 3.69
CCM2-218ENST00000541586 PPIP5K1Q6PFW1 1433 aa38.1■■■■□ 3.69
CCM2-218ENST00000541586 SLC12A5Q9H2X9 1139 aa38.09■■■■□ 3.69
CCM2-218ENST00000541586 DDX17Q92841 729 aaKnown RBP38.09■■■■□ 3.69
CCM2-218ENST00000541586 FOXO3O43524 673 aa38.08■■■■□ 3.69
CCM2-218ENST00000541586 NGDNQ8NEJ9 315 aaKnown RBP38.08■■■■□ 3.69
CCM2-218ENST00000541586 PRKRIP1Q9H875 184 aaPredicted RBP38.04■■■■□ 3.68
CCM2-218ENST00000541586 MYOM1P52179 1685 aa38.03■■■■□ 3.68
CCM2-218ENST00000541586 PLEKHG3A1L390 1219 aa38.03■■■■□ 3.68
CCM2-218ENST00000541586 ACEP12821 1306 aa38.02■■■■□ 3.68
CCM2-218ENST00000541586 CCER2I3L3R5 266 aa38.02■■■■□ 3.68
CCM2-218ENST00000541586 ROBO1Q9Y6N7 1651 aa38.02■■■■□ 3.68
CCM2-218ENST00000541586 XPCQ01831 940 aaPredicted RBP38.01■■■■□ 3.68
CCM2-218ENST00000541586 PANK3Q9H999 370 aa38.01■■■■□ 3.68
CCM2-218ENST00000541586 PSME1Q06323 249 aa38■■■■□ 3.67
CCM2-218ENST00000541586 ITSN1Q15811 1721 aa37.98■■■■□ 3.67
CCM2-218ENST00000541586 PER1O15534 1290 aaPredicted RBP37.98■■■■□ 3.67
CCM2-218ENST00000541586 TOPAZ1Q8N9V7 1692 aa37.95■■■■□ 3.67
CCM2-218ENST00000541586 NPHP3Q7Z494 1330 aa37.94■■■■□ 3.66
CCM2-218ENST00000541586 HDGFL2Q7Z4V5 671 aaPredicted RBP37.93■■■■□ 3.66
CCM2-218ENST00000541586 FBXO41Q8TF61 875 aa37.93■■■■□ 3.66
CCM2-218ENST00000541586 KRT28Q7Z3Y7 464 aa37.92■■■■□ 3.66
CCM2-218ENST00000541586 TERF2IPQ9NYB0 399 aa37.92■■■■□ 3.66
CCM2-218ENST00000541586 NINLQ9Y2I6 1382 aa37.91■■■■□ 3.66
CCM2-218ENST00000541586 ZNF692Q9BU19 519 aaPredicted RBP37.9■■■■□ 3.66
CCM2-218ENST00000541586 POLR3AO14802 1390 aaPredicted RBP37.89■■■■□ 3.66
CCM2-218ENST00000541586 KIF1AQ12756 1690 aa37.89■■■■□ 3.66
CCM2-218ENST00000541586 PAK3O75914 559 aaPredicted RBP37.88■■■■□ 3.65
CCM2-218ENST00000541586 CNGB1Q14028 1251 aaPredicted RBP37.88■■■■□ 3.65
CCM2-218ENST00000541586 KTN1Q86UP2 1357 aaKnown RBP37.86■■■■□ 3.65
CCM2-218ENST00000541586 A0A1W2PP64 1363 aa37.85■■■■□ 3.65
CCM2-218ENST00000541586 CD163L1Q9NR16 1453 aa37.84■■■■□ 3.65
CCM2-218ENST00000541586 YTHDC1Q96MU7 727 aaKnown RBP37.84■■■■□ 3.65
CCM2-218ENST00000541586 HSPA1LP34931 641 aa37.83■■■■□ 3.65
CCM2-218ENST00000541586 CPSF1Q10570 1443 aaKnown RBP37.83■■■■□ 3.65
CCM2-218ENST00000541586 ANKRD36BQ8N2N9 1353 aa37.83■■■■□ 3.65
CCM2-218ENST00000541586 LMOD2Q6P5Q4 547 aa37.82■■■■□ 3.65
CCM2-218ENST00000541586 SOS2Q07890 1332 aaPredicted RBP37.82■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms