RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
PHACTR3-209ENST00000541461 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
PHACTR3-209ENST00000541461 C3P01024 1663 aa13.75□□□□□ -0.21
PHACTR3-209ENST00000541461 SPATA31D1Q6ZQQ2 1576 aa13.74□□□□□ -0.21
PHACTR3-209ENST00000541461 KIF1BO60333 1816 aa13.74□□□□□ -0.21
PHACTR3-209ENST00000541461 ZNF521Q96K83 1311 aa13.74□□□□□ -0.21
PHACTR3-209ENST00000541461 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
PHACTR3-209ENST00000541461 TNRQ92752 1358 aa13.73□□□□□ -0.21
PHACTR3-209ENST00000541461 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
PHACTR3-209ENST00000541461 MYO5BQ9ULV0 1848 aa13.73□□□□□ -0.21
PHACTR3-209ENST00000541461 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
PHACTR3-209ENST00000541461 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
PHACTR3-209ENST00000541461 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
PHACTR3-209ENST00000541461 FAM161AQ3B820 660 aa13.72□□□□□ -0.21
PHACTR3-209ENST00000541461 PTPRMP28827 1452 aa13.72□□□□□ -0.21
PHACTR3-209ENST00000541461 SLFN5Q08AF3 891 aa13.72□□□□□ -0.21
PHACTR3-209ENST00000541461 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
PHACTR3-209ENST00000541461 RGS3P49796 1198 aa13.71□□□□□ -0.21
PHACTR3-209ENST00000541461 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
PHACTR3-209ENST00000541461 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
PHACTR3-209ENST00000541461 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
PHACTR3-209ENST00000541461 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
PHACTR3-209ENST00000541461 ADGRB3O60242 1522 aa13.69□□□□□ -0.22
PHACTR3-209ENST00000541461 GSE1Q14687 1217 aa13.69□□□□□ -0.22
PHACTR3-209ENST00000541461 ADGRF5Q8IZF2 1346 aa13.68□□□□□ -0.22
PHACTR3-209ENST00000541461 BCAR3O75815 825 aa13.68□□□□□ -0.22
PHACTR3-209ENST00000541461 APAF1O14727 1248 aa13.68□□□□□ -0.22
PHACTR3-209ENST00000541461 TRMT2AQ8IZ69 625 aaKnown RBP13.68□□□□□ -0.22
PHACTR3-209ENST00000541461 ASXL1Q8IXJ9 1541 aa13.67□□□□□ -0.22
PHACTR3-209ENST00000541461 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
PHACTR3-209ENST00000541461 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
PHACTR3-209ENST00000541461 PIK3C2GO75747 1445 aa13.66□□□□□ -0.22
PHACTR3-209ENST00000541461 ARXQ96QS3 562 aa13.65□□□□□ -0.22
PHACTR3-209ENST00000541461 BRPF3Q9ULD4 1205 aa13.65□□□□□ -0.22
PHACTR3-209ENST00000541461 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.22
PHACTR3-209ENST00000541461 NLRP1Q9C000 1473 aa13.65□□□□□ -0.22
PHACTR3-209ENST00000541461 FRAT1Q92837 279 aaPredicted RBP13.65□□□□□ -0.22
PHACTR3-209ENST00000541461 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
PHACTR3-209ENST00000541461 MYOM1P52179 1685 aa13.64□□□□□ -0.23
PHACTR3-209ENST00000541461 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
PHACTR3-209ENST00000541461 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
PHACTR3-209ENST00000541461 NEURL4Q96JN8 1562 aa13.63□□□□□ -0.23
PHACTR3-209ENST00000541461 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
PHACTR3-209ENST00000541461 IGHDP01880 384 aa13.63□□□□□ -0.23
PHACTR3-209ENST00000541461 PPLO60437 1756 aa13.63□□□□□ -0.23
PHACTR3-209ENST00000541461 FRAT2O75474 233 aaPredicted RBP13.62□□□□□ -0.23
PHACTR3-209ENST00000541461 CFAP70Q5T0N1 1121 aa13.62□□□□□ -0.23
PHACTR3-209ENST00000541461 NEXMIFQ5QGS0 1516 aa13.62□□□□□ -0.23
PHACTR3-209ENST00000541461 RPGRIP1LQ68CZ1 1315 aa13.62□□□□□ -0.23
PHACTR3-209ENST00000541461 EIF3AQ14152 1382 aaKnown RBP13.62□□□□□ -0.23
PHACTR3-209ENST00000541461 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
PHACTR3-209ENST00000541461 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
PHACTR3-209ENST00000541461 E9PSI1 815 aa13.61□□□□□ -0.23
PHACTR3-209ENST00000541461 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
PHACTR3-209ENST00000541461 SETD1BQ9UPS6 1966 aaKnown RBP13.61□□□□□ -0.23
PHACTR3-209ENST00000541461 UBR1Q8IWV7 1749 aa13.6□□□□□ -0.23
PHACTR3-209ENST00000541461 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
PHACTR3-209ENST00000541461 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
PHACTR3-209ENST00000541461 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
PHACTR3-209ENST00000541461 STAC3Q96MF2 364 aa13.59□□□□□ -0.23
PHACTR3-209ENST00000541461 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
PHACTR3-209ENST00000541461 RIMS2Q9UQ26 1411 aa13.59□□□□□ -0.23
PHACTR3-209ENST00000541461 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.23
PHACTR3-209ENST00000541461 TMEM132EQ6IEE7 984 aa13.58□□□□□ -0.23
PHACTR3-209ENST00000541461 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.24
PHACTR3-209ENST00000541461 PANK1Q8TE04 598 aa13.58□□□□□ -0.24
PHACTR3-209ENST00000541461 USP19O94966 1318 aa13.58□□□□□ -0.24
PHACTR3-209ENST00000541461 MYOM2P54296 1465 aa13.58□□□□□ -0.24
PHACTR3-209ENST00000541461 SEC24BO95487 1268 aa13.57□□□□□ -0.24
PHACTR3-209ENST00000541461 LTKP29376 864 aa13.57□□□□□ -0.24
PHACTR3-209ENST00000541461 COG6Q9Y2V7 657 aa13.57□□□□□ -0.24
PHACTR3-209ENST00000541461 ZFYVE9O95405 1425 aa13.56□□□□□ -0.24
PHACTR3-209ENST00000541461 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
PHACTR3-209ENST00000541461 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
PHACTR3-209ENST00000541461 CANXP27824 592 aaKnown RBP13.56□□□□□ -0.24
PHACTR3-209ENST00000541461 TXNDC2Q86VQ3 553 aa13.56□□□□□ -0.24
PHACTR3-209ENST00000541461 WWC1Q8IX03 1113 aa13.56□□□□□ -0.24
PHACTR3-209ENST00000541461 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
PHACTR3-209ENST00000541461 VIRMAQ69YN4 1812 aaKnown RBP13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 CGNL1Q0VF96 1302 aa13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 NEUROD2Q15784 382 aa13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 EID1Q9Y6B2 187 aa13.55□□□□□ -0.24
PHACTR3-209ENST00000541461 C14orf93Q9H972 538 aaKnown RBP13.53□□□□□ -0.24
PHACTR3-209ENST00000541461 ZNF142P52746 1687 aaPredicted RBP13.53□□□□□ -0.24
PHACTR3-209ENST00000541461 RRP7AQ9Y3A4 280 aaKnown RBP13.53□□□□□ -0.24
PHACTR3-209ENST00000541461 SLIT1O75093 1534 aa13.53□□□□□ -0.24
PHACTR3-209ENST00000541461 TNNT2P45379 298 aaPredicted RBP13.52□□□□□ -0.24
PHACTR3-209ENST00000541461 KLHL34Q8N239 644 aa13.52□□□□□ -0.24
PHACTR3-209ENST00000541461 KIAA1210Q9ULL0 1709 aa13.52□□□□□ -0.24
PHACTR3-209ENST00000541461 ARHGAP23Q9P227 1491 aa13.52□□□□□ -0.25
PHACTR3-209ENST00000541461 HSPA2P54652 639 aa13.52□□□□□ -0.25
PHACTR3-209ENST00000541461 STK26Q9P289 416 aa13.52□□□□□ -0.25
PHACTR3-209ENST00000541461 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
PHACTR3-209ENST00000541461 TRAK1Q9UPV9 953 aa13.51□□□□□ -0.25
PHACTR3-209ENST00000541461 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
PHACTR3-209ENST00000541461 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms