RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TRIM5Q9C035 493 aa18.4■□□□□ 0.54
HMGA2-210ENST00000541363 NF2P35240 595 aa18.4■□□□□ 0.54
HMGA2-210ENST00000541363 SEPT11Q9NVA2 429 aaKnown RBP18.39■□□□□ 0.53
HMGA2-210ENST00000541363 GIMAP7Q8NHV1 300 aa18.39■□□□□ 0.53
HMGA2-210ENST00000541363 MEX3CQ5U5Q3 659 aaKnown RBP18.39■□□□□ 0.53
HMGA2-210ENST00000541363 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
HMGA2-210ENST00000541363 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
HMGA2-210ENST00000541363 DHX8Q14562 1220 aaKnown RBP18.39■□□□□ 0.53
HMGA2-210ENST00000541363 NINLQ9Y2I6 1382 aa18.38■□□□□ 0.53
HMGA2-210ENST00000541363 DESP17661 470 aa18.38■□□□□ 0.53
HMGA2-210ENST00000541363 DEF6Q9H4E7 631 aa18.38■□□□□ 0.53
HMGA2-210ENST00000541363 FYB1O15117 783 aa18.38■□□□□ 0.53
HMGA2-210ENST00000541363 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
HMGA2-210ENST00000541363 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
HMGA2-210ENST00000541363 CCDC91Q7Z6B0 441 aa18.37■□□□□ 0.53
HMGA2-210ENST00000541363 CENPHQ9H3R5 247 aa18.37■□□□□ 0.53
HMGA2-210ENST00000541363 KRT18P05783 430 aaKnown RBP18.37■□□□□ 0.53
HMGA2-210ENST00000541363 PSMA5P28066 241 aa18.37■□□□□ 0.53
HMGA2-210ENST00000541363 HSP90AB4PQ58FF6 505 aa18.37■□□□□ 0.53
HMGA2-210ENST00000541363 PDCL3Q9H2J4 239 aa18.37■□□□□ 0.53
HMGA2-210ENST00000541363 IQCEQ6IPM2 695 aa18.37■□□□□ 0.53
HMGA2-210ENST00000541363 KIF15Q9NS87 1388 aa18.37■□□□□ 0.53
HMGA2-210ENST00000541363 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.36■□□□□ 0.532e-7■■■■□ 24.5
HMGA2-210ENST00000541363 E9PSI1 815 aa18.36■□□□□ 0.53
HMGA2-210ENST00000541363 KINO60870 393 aaKnown RBP18.36■□□□□ 0.53
HMGA2-210ENST00000541363 DDX19BQ9UMR2 479 aa18.36■□□□□ 0.53
HMGA2-210ENST00000541363 EIF2S2P20042 333 aaKnown RBP18.36■□□□□ 0.53
HMGA2-210ENST00000541363 HMGN5P82970 282 aaKnown RBP18.36■□□□□ 0.53
HMGA2-210ENST00000541363 CCDC112Q8NEF3 446 aa18.36■□□□□ 0.53
HMGA2-210ENST00000541363 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
HMGA2-210ENST00000541363 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
HMGA2-210ENST00000541363 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
HMGA2-210ENST00000541363 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
HMGA2-210ENST00000541363 ERLIN1O75477 346 aa18.35■□□□□ 0.53
HMGA2-210ENST00000541363 NEBLO76041 1014 aa18.35■□□□□ 0.53
HMGA2-210ENST00000541363 STAMBPO95630 424 aa18.34■□□□□ 0.53
HMGA2-210ENST00000541363 MRE11P49959 708 aa18.33■□□□□ 0.53
HMGA2-210ENST00000541363 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
HMGA2-210ENST00000541363 BCL2L13Q9BXK5 485 aa18.33■□□□□ 0.52
HMGA2-210ENST00000541363 WASHC4Q2M389 1173 aa18.32■□□□□ 0.52
HMGA2-210ENST00000541363 PPM1EQ8WY54 764 aa18.32■□□□□ 0.52
HMGA2-210ENST00000541363 TSPY26PQ9H489 355 aa18.32■□□□□ 0.52
HMGA2-210ENST00000541363 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
HMGA2-210ENST00000541363 STIM1Q13586 685 aa18.32■□□□□ 0.52
HMGA2-210ENST00000541363 COG3Q96JB2 828 aa18.32■□□□□ 0.52
HMGA2-210ENST00000541363 CEP63Q96MT8 703 aa18.32■□□□□ 0.52
HMGA2-210ENST00000541363 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
HMGA2-210ENST00000541363 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
HMGA2-210ENST00000541363 PPFIBP1Q86W92 1011 aa18.31■□□□□ 0.52
HMGA2-210ENST00000541363 GOLGA6L10A0A0M3HER8 536 aa18.31■□□□□ 0.52
HMGA2-210ENST00000541363 LRRCC1Q9C099 1032 aa18.31■□□□□ 0.52
HMGA2-210ENST00000541363 MTMR7Q9Y216 660 aa18.3■□□□□ 0.52
HMGA2-210ENST00000541363 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
HMGA2-210ENST00000541363 CRBNQ96SW2 442 aa18.3■□□□□ 0.52
HMGA2-210ENST00000541363 DACH1Q9UI36 760 aa18.3■□□□□ 0.52
HMGA2-210ENST00000541363 PKNOX2Q96KN3 472 aa18.3■□□□□ 0.52
HMGA2-210ENST00000541363 ZNF396Q96N95 335 aaPredicted RBP18.3■□□□□ 0.52
HMGA2-210ENST00000541363 FOXD1Q16676 465 aa18.3■□□□□ 0.52
HMGA2-210ENST00000541363 SYTL4Q96C24 671 aaPredicted RBP18.29■□□□□ 0.52
HMGA2-210ENST00000541363 MYBBP1AQ9BQG0 1328 aaKnown RBP18.29■□□□□ 0.52
HMGA2-210ENST00000541363 FAM193AP78312 1265 aa18.28■□□□□ 0.52
HMGA2-210ENST00000541363 SERPINC1P01008 464 aa18.28■□□□□ 0.52
HMGA2-210ENST00000541363 TRIM21P19474 475 aaKnown RBP18.28■□□□□ 0.52
HMGA2-210ENST00000541363 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
HMGA2-210ENST00000541363 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
HMGA2-210ENST00000541363 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
HMGA2-210ENST00000541363 MAP2K1Q02750 393 aaPredicted RBP18.27■□□□□ 0.52
HMGA2-210ENST00000541363 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.52
HMGA2-210ENST00000541363 NUP155O75694 1391 aa18.27■□□□□ 0.51
HMGA2-210ENST00000541363 KIF3BO15066 747 aa18.27■□□□□ 0.51
HMGA2-210ENST00000541363 CNTROBQ8N137 903 aa18.27■□□□□ 0.51
HMGA2-210ENST00000541363 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
HMGA2-210ENST00000541363 JAKMIP3Q5VZ66 844 aa18.26■□□□□ 0.51
HMGA2-210ENST00000541363 NEUROD6Q96NK8 337 aa18.26■□□□□ 0.51
HMGA2-210ENST00000541363 TANGO6Q9C0B7 1094 aa18.26■□□□□ 0.51
HMGA2-210ENST00000541363 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
HMGA2-210ENST00000541363 RNF214Q8ND24 703 aa18.26■□□□□ 0.51
HMGA2-210ENST00000541363 FMNL2Q96PY5 1086 aa18.25■□□□□ 0.51
HMGA2-210ENST00000541363 KDM4AO75164 1064 aa18.25■□□□□ 0.51
HMGA2-210ENST00000541363 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
HMGA2-210ENST00000541363 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
HMGA2-210ENST00000541363 MBD3O95983 291 aa18.25■□□□□ 0.51
HMGA2-210ENST00000541363 PLIN1O60240 522 aa18.24■□□□□ 0.51
HMGA2-210ENST00000541363 PDCP20941 246 aa18.24■□□□□ 0.51
HMGA2-210ENST00000541363 SPC24Q8NBT2 197 aa18.24■□□□□ 0.51
HMGA2-210ENST00000541363 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
HMGA2-210ENST00000541363 FEZ1Q99689 392 aa18.24■□□□□ 0.51
HMGA2-210ENST00000541363 SPATA24Q86W54 205 aa18.24■□□□□ 0.51
HMGA2-210ENST00000541363 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
HMGA2-210ENST00000541363 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
HMGA2-210ENST00000541363 LRRFIP2Q9Y608 721 aaKnown RBP18.23■□□□□ 0.51
HMGA2-210ENST00000541363 GRIPAP1Q4V328 841 aa18.23■□□□□ 0.51
HMGA2-210ENST00000541363 MPHOSPH9Q99550 1183 aa18.23■□□□□ 0.51
HMGA2-210ENST00000541363 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
HMGA2-210ENST00000541363 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
HMGA2-210ENST00000541363 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
HMGA2-210ENST00000541363 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
HMGA2-210ENST00000541363 DNAI2Q9GZS0 605 aa18.22■□□□□ 0.51
HMGA2-210ENST00000541363 PPM1FP49593 454 aaPredicted RBP18.22■□□□□ 0.51
HMGA2-210ENST00000541363 DZIP1LQ8IYY4 767 aaKnown RBP18.22■□□□□ 0.51
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