RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PAK3O75914 559 aaPredicted RBP22.85■■□□□ 1.25
SPIDR-227ENST00000541342 UBR1Q8IWV7 1749 aa22.84■■□□□ 1.25
SPIDR-227ENST00000541342 SAFB2Q14151 953 aaKnown RBP eCLIP22.84■■□□□ 1.252e-6■■■■□ 22
SPIDR-227ENST00000541342 NOP58Q9Y2X3 529 aaKnown RBP22.82■■□□□ 1.24
SPIDR-227ENST00000541342 SLC12A5Q9H2X9 1139 aa22.82■■□□□ 1.24
SPIDR-227ENST00000541342 PPP2R1AP30153 589 aa22.82■■□□□ 1.24
SPIDR-227ENST00000541342 EVC2Q86UK5 1308 aa22.81■■□□□ 1.24
SPIDR-227ENST00000541342 C3P01024 1663 aa22.81■■□□□ 1.24
SPIDR-227ENST00000541342 FER1L4A9Z1Z3 1794 aa22.8■■□□□ 1.24
SPIDR-227ENST00000541342 PRAM1Q96QH2 718 aa22.8■■□□□ 1.24
SPIDR-227ENST00000541342 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
SPIDR-227ENST00000541342 PUS7Q96PZ0 661 aaKnown RBP22.78■■□□□ 1.24
SPIDR-227ENST00000541342 CABP2Q9NPB3 220 aa22.77■■□□□ 1.24
SPIDR-227ENST00000541342 NSD3Q9BZ95 1437 aa22.76■■□□□ 1.23
SPIDR-227ENST00000541342 RRP1P56182 461 aaKnown RBP22.76■■□□□ 1.23
SPIDR-227ENST00000541342 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.76■■□□□ 1.23
SPIDR-227ENST00000541342 DLC1Q96QB1 1528 aa22.74■■□□□ 1.23
SPIDR-227ENST00000541342 TMEM2Q9UHN6 1383 aa22.74■■□□□ 1.23
SPIDR-227ENST00000541342 MINK1Q8N4C8 1332 aaPredicted RBP22.74■■□□□ 1.23
SPIDR-227ENST00000541342 POGKQ9P215 609 aa22.74■■□□□ 1.23
SPIDR-227ENST00000541342 USP32Q8NFA0 1604 aa22.73■■□□□ 1.23
SPIDR-227ENST00000541342 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
SPIDR-227ENST00000541342 METP08581 1390 aa22.72■■□□□ 1.23
SPIDR-227ENST00000541342 BLMP54132 1417 aaPredicted RBP22.72■■□□□ 1.23
SPIDR-227ENST00000541342 EXOC6Q8TAG9 804 aa22.72■■□□□ 1.23
SPIDR-227ENST00000541342 IPO9Q96P70 1041 aaKnown RBP22.7■■□□□ 1.23
SPIDR-227ENST00000541342 INSRP06213 1382 aa22.7■■□□□ 1.22
SPIDR-227ENST00000541342 ANKRD36BQ8N2N9 1353 aa22.7■■□□□ 1.22
SPIDR-227ENST00000541342 PLEKHH1Q9ULM0 1364 aa22.7■■□□□ 1.22
SPIDR-227ENST00000541342 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
SPIDR-227ENST00000541342 RCAN3Q9UKA8 241 aa22.69■■□□□ 1.22
SPIDR-227ENST00000541342 ABCC11Q96J66 1382 aa22.69■■□□□ 1.22
SPIDR-227ENST00000541342 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
SPIDR-227ENST00000541342 SALL2Q9Y467 1007 aaPredicted RBP22.69■■□□□ 1.22
SPIDR-227ENST00000541342 DEKP35659 375 aaKnown RBP22.68■■□□□ 1.22
SPIDR-227ENST00000541342 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
SPIDR-227ENST00000541342 PLPPR3Q6T4P5 718 aa22.67■■□□□ 1.22
SPIDR-227ENST00000541342 ADAMTS8Q9UP79 889 aa22.67■■□□□ 1.22
SPIDR-227ENST00000541342 KNDC1Q76NI1 1749 aa22.67■■□□□ 1.22
SPIDR-227ENST00000541342 ANP32AP39687 249 aaKnown RBP22.66■■□□□ 1.22
SPIDR-227ENST00000541342 NBR1Q14596 966 aa22.66■■□□□ 1.22
SPIDR-227ENST00000541342 CDCA7LQ96GN5 454 aa22.65■■□□□ 1.22
SPIDR-227ENST00000541342 LTKP29376 864 aa22.65■■□□□ 1.22
SPIDR-227ENST00000541342 CDK19Q9BWU1 502 aa22.65■■□□□ 1.22
SPIDR-227ENST00000541342 A0A1W2PP64 1363 aa22.65■■□□□ 1.22
SPIDR-227ENST00000541342 NINLQ9Y2I6 1382 aa22.65■■□□□ 1.22
SPIDR-227ENST00000541342 ATAD2Q6PL18 1390 aa22.64■■□□□ 1.22
SPIDR-227ENST00000541342 CD163L1Q9NR16 1453 aa22.64■■□□□ 1.22
SPIDR-227ENST00000541342 ADAMTS13Q76LX8 1427 aa22.64■■□□□ 1.21
SPIDR-227ENST00000541342 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.21
SPIDR-227ENST00000541342 PDE3BQ13370 1112 aa22.62■■□□□ 1.21
SPIDR-227ENST00000541342 CGNL1Q0VF96 1302 aa22.62■■□□□ 1.21
SPIDR-227ENST00000541342 TECPR2O15040 1411 aa22.61■■□□□ 1.21
SPIDR-227ENST00000541342 TXNDC2Q86VQ3 553 aa22.61■■□□□ 1.21
SPIDR-227ENST00000541342 CPS1P31327 1500 aa22.61■■□□□ 1.21
SPIDR-227ENST00000541342 PLEKHG1Q9ULL1 1385 aa22.61■■□□□ 1.21
SPIDR-227ENST00000541342 SLIT1O75093 1534 aa22.61■■□□□ 1.21
SPIDR-227ENST00000541342 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
SPIDR-227ENST00000541342 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
SPIDR-227ENST00000541342 ARHGAP23Q9P227 1491 aa22.6■■□□□ 1.21
SPIDR-227ENST00000541342 RIMS1Q86UR5 1692 aaKnown RBP22.58■■□□□ 1.21
SPIDR-227ENST00000541342 TNNT2P45379 298 aaPredicted RBP22.58■■□□□ 1.2
SPIDR-227ENST00000541342 FAM135BQ49AJ0 1406 aa22.58■■□□□ 1.2
SPIDR-227ENST00000541342 MED14O60244 1454 aa22.57■■□□□ 1.2
SPIDR-227ENST00000541342 NSD2O96028 1365 aa22.56■■□□□ 1.2
SPIDR-227ENST00000541342 POLR3AO14802 1390 aaPredicted RBP22.56■■□□□ 1.2
SPIDR-227ENST00000541342 SHPRHQ149N8 1683 aa22.56■■□□□ 1.2
SPIDR-227ENST00000541342 ZBTB47Q9UFB7 747 aaPredicted RBP22.56■■□□□ 1.2
SPIDR-227ENST00000541342 TCERG1O14776 1098 aaKnown RBP22.55■■□□□ 1.2
SPIDR-227ENST00000541342 CABP1Q9NZU7 370 aa22.55■■□□□ 1.2
SPIDR-227ENST00000541342 SIRT1Q96EB6 747 aa22.55■■□□□ 1.2
SPIDR-227ENST00000541342 PLIN1O60240 522 aa22.54■■□□□ 1.2
SPIDR-227ENST00000541342 TERF2IPQ9NYB0 399 aa22.54■■□□□ 1.2
SPIDR-227ENST00000541342 ROBO2Q9HCK4 1378 aa22.54■■□□□ 1.2
SPIDR-227ENST00000541342 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
SPIDR-227ENST00000541342 PDE4AP27815 886 aa22.52■■□□□ 1.2
SPIDR-227ENST00000541342 WASLO00401 505 aaPredicted RBP22.52■■□□□ 1.2
SPIDR-227ENST00000541342 EID1Q9Y6B2 187 aa22.52■■□□□ 1.2
SPIDR-227ENST00000541342 SLC26A8Q96RN1 970 aa22.51■■□□□ 1.19
SPIDR-227ENST00000541342 BACH2Q9BYV9 841 aa22.51■■□□□ 1.19
SPIDR-227ENST00000541342 PTPRUQ92729 1446 aa22.51■■□□□ 1.19
SPIDR-227ENST00000541342 ADAMTSL3P82987 1691 aa22.5■■□□□ 1.19
SPIDR-227ENST00000541342 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.5■■□□□ 1.19
SPIDR-227ENST00000541342 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
SPIDR-227ENST00000541342 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
SPIDR-227ENST00000541342 THEMISQ8N1K5 641 aaPredicted RBP22.49■■□□□ 1.19
SPIDR-227ENST00000541342 ATP7BP35670 1465 aa22.49■■□□□ 1.19
SPIDR-227ENST00000541342 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
SPIDR-227ENST00000541342 GGNBP2Q9H3C7 697 aa22.49■■□□□ 1.19
SPIDR-227ENST00000541342 FYB1O15117 783 aa22.49■■□□□ 1.19
SPIDR-227ENST00000541342 MTHFSP49914 203 aa22.49■■□□□ 1.19
SPIDR-227ENST00000541342 HDGFL2Q7Z4V5 671 aaPredicted RBP22.49■■□□□ 1.19
SPIDR-227ENST00000541342 SKAP1Q86WV1 359 aa22.48■■□□□ 1.19
SPIDR-227ENST00000541342 NPM2Q86SE8 214 aaKnown RBP22.47■■□□□ 1.19
SPIDR-227ENST00000541342 MS4A1P11836 297 aa22.47■■□□□ 1.19
SPIDR-227ENST00000541342 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
SPIDR-227ENST00000541342 PPIP5K1Q6PFW1 1433 aa22.46■■□□□ 1.19
SPIDR-227ENST00000541342 ADGRB2O60241 1585 aa22.46■■□□□ 1.19
SPIDR-227ENST00000541342 NCKAP5LQ9HCH0 1330 aa22.45■■□□□ 1.18
SPIDR-227ENST00000541342 ZNF521Q96K83 1311 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms