RNA–Protein interactions for RNA: ENST00000541335.1

KDM5A-208, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-208ENST00000541335 FOXC1Q12948 553 aa8.05□□□□□ -1.12
KDM5A-208ENST00000541335 FAM187AA6NFU0 413 aa8.04□□□□□ -1.12
KDM5A-208ENST00000541335 MMP16P51512 607 aa8.04□□□□□ -1.12
KDM5A-208ENST00000541335 MYT1Q01538 1121 aa8.04□□□□□ -1.12
KDM5A-208ENST00000541335 CD2BP2O95400 341 aaKnown RBP8.03□□□□□ -1.12
KDM5A-208ENST00000541335 BARGINQ6ZT62 677 aa8.03□□□□□ -1.12
KDM5A-208ENST00000541335 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
KDM5A-208ENST00000541335 REPIN1Q9BWE0 567 aaKnown RBP8.03□□□□□ -1.12
KDM5A-208ENST00000541335 DXOO77932 396 aaKnown RBP8.02□□□□□ -1.13
KDM5A-208ENST00000541335 GUCA2AQ02747 115 aa8.02□□□□□ -1.13
KDM5A-208ENST00000541335 ZNF787Q6DD87 383 aa8.02□□□□□ -1.13
KDM5A-208ENST00000541335 KRI1Q8N9T8 703 aaKnown RBP8.02□□□□□ -1.13
KDM5A-208ENST00000541335 ZMYND10O75800 440 aa8.01□□□□□ -1.13
KDM5A-208ENST00000541335 ZC3H15Q8WU90 426 aaKnown RBP8.01□□□□□ -1.13
KDM5A-208ENST00000541335 ZBTB24O43167 697 aaPredicted RBP8□□□□□ -1.13
KDM5A-208ENST00000541335 NUTM1Q86Y26 1132 aa8□□□□□ -1.13
KDM5A-208ENST00000541335 TOR4AQ9NXH8 423 aa8□□□□□ -1.13
KDM5A-208ENST00000541335 SSTR3P32745 418 aaPredicted RBP7.98□□□□□ -1.13
KDM5A-208ENST00000541335 TRIM32Q13049 653 aa7.98□□□□□ -1.13
KDM5A-208ENST00000541335 AMHR2Q16671 573 aa7.98□□□□□ -1.13
KDM5A-208ENST00000541335 SYMPKQ92797 1274 aaKnown RBP7.98□□□□□ -1.13
KDM5A-208ENST00000541335 TTLL12Q14166 644 aaPredicted RBP7.97□□□□□ -1.13
KDM5A-208ENST00000541335 CYP4X1Q8N118 509 aa7.97□□□□□ -1.13
KDM5A-208ENST00000541335 WNT7AO00755 349 aa7.96□□□□□ -1.14
KDM5A-208ENST00000541335 ST8SIA5O15466 376 aa7.96□□□□□ -1.14
KDM5A-208ENST00000541335 FDX1P10109 184 aa7.96□□□□□ -1.14
KDM5A-208ENST00000541335 JUNDP17535 347 aa7.96□□□□□ -1.14
KDM5A-208ENST00000541335 AAASQ9NRG9 546 aa7.96□□□□□ -1.14
KDM5A-208ENST00000541335 PCDHGC3Q9UN70 934 aa7.96□□□□□ -1.14
KDM5A-208ENST00000541335 RETREG3Q86VR2 466 aa7.95□□□□□ -1.14
KDM5A-208ENST00000541335 CCDC24Q8N4L8 307 aa7.95□□□□□ -1.14
KDM5A-208ENST00000541335 SPIRE2Q8WWL2 714 aa7.95□□□□□ -1.14
KDM5A-208ENST00000541335 POTECB2RU33 542 aa7.94□□□□□ -1.14
KDM5A-208ENST00000541335 AVPP01185 164 aa7.94□□□□□ -1.14
KDM5A-208ENST00000541335 GIGYF2Q6Y7W6 1299 aaKnown RBP7.94□□□□□ -1.14
KDM5A-208ENST00000541335 CRIPAKQ8N1N5 446 aa7.93□□□□□ -1.14
KDM5A-208ENST00000541335 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
KDM5A-208ENST00000541335 MOXD2PA6NHM9 499 aa7.92□□□□□ -1.14
KDM5A-208ENST00000541335 NDUFV2P19404 249 aa7.92□□□□□ -1.14
KDM5A-208ENST00000541335 ZNF775Q96BV0 537 aaPredicted RBP7.92□□□□□ -1.14
KDM5A-208ENST00000541335 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
KDM5A-208ENST00000541335 C6orf229H3BNL8 230 aa7.91□□□□□ -1.14
KDM5A-208ENST00000541335 SKOR1P84550 965 aa7.91□□□□□ -1.14
KDM5A-208ENST00000541335 SNIP1Q8TAD8 396 aaKnown RBP7.91□□□□□ -1.14
KDM5A-208ENST00000541335 TRIM66O15016 1216 aa7.9□□□□□ -1.14
KDM5A-208ENST00000541335 SMPD1P17405 629 aa7.9□□□□□ -1.14
KDM5A-208ENST00000541335 PARP9Q8IXQ6 854 aa7.9□□□□□ -1.14
KDM5A-208ENST00000541335 NUDT12Q9BQG2 462 aa7.9□□□□□ -1.14
KDM5A-208ENST00000541335 BEGAINQ9BUH8 593 aa7.9□□□□□ -1.14
KDM5A-208ENST00000541335 DACH1Q9UI36 760 aa7.9□□□□□ -1.14
KDM5A-208ENST00000541335 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
KDM5A-208ENST00000541335 WNT7BP56706 349 aa7.89□□□□□ -1.15
KDM5A-208ENST00000541335 CTC1Q2NKJ3 1217 aa7.89□□□□□ -1.15
KDM5A-208ENST00000541335 RC3H1Q5TC82 1133 aaKnown RBP7.89□□□□□ -1.15
KDM5A-208ENST00000541335 PTCRAQ6ISU1 281 aaPredicted RBP7.89□□□□□ -1.15
KDM5A-208ENST00000541335 AXIN1O15169 862 aa7.88□□□□□ -1.15
KDM5A-208ENST00000541335 MS4A1P11836 297 aa7.88□□□□□ -1.15
KDM5A-208ENST00000541335 AK7Q96M32 723 aa7.88□□□□□ -1.15
KDM5A-208ENST00000541335 J3QL48 77 aa7.87□□□□□ -1.15
KDM5A-208ENST00000541335 TBC1D2Q9BYX2 928 aa7.87□□□□□ -1.15
KDM5A-208ENST00000541335 CCNYL3P0C7X3 344 aa7.86□□□□□ -1.15
KDM5A-208ENST00000541335 PTPRNQ16849 979 aa7.86□□□□□ -1.15
KDM5A-208ENST00000541335 PRR7Q8TB68 274 aa7.86□□□□□ -1.15
KDM5A-208ENST00000541335 GJA5P36382 358 aa7.85□□□□□ -1.15
KDM5A-208ENST00000541335 MTMR2Q13614 643 aa7.85□□□□□ -1.15
KDM5A-208ENST00000541335 RSBN1LQ6PCB5 846 aaPredicted RBP7.85□□□□□ -1.15
KDM5A-208ENST00000541335 SPDYE5A6NIY4 337 aa7.84□□□□□ -1.15
KDM5A-208ENST00000541335 DIXDC1Q155Q3 683 aa7.84□□□□□ -1.15
KDM5A-208ENST00000541335 GMPR2Q9P2T1 348 aaKnown RBP7.84□□□□□ -1.15
KDM5A-208ENST00000541335 SPTLC1O15269 473 aa7.83□□□□□ -1.16
KDM5A-208ENST00000541335 DESI1Q6ICB0 168 aa7.83□□□□□ -1.16
KDM5A-208ENST00000541335 HPS1Q92902 700 aa7.83□□□□□ -1.16
KDM5A-208ENST00000541335 EVA1BQ9NVM1 165 aa7.83□□□□□ -1.16
KDM5A-208ENST00000541335 PCDHB15Q9Y5E8 787 aa7.83□□□□□ -1.16
KDM5A-208ENST00000541335 SIAH2O43255 324 aa7.82□□□□□ -1.16
KDM5A-208ENST00000541335 UNC93B1Q9H1C4 597 aa7.82□□□□□ -1.16
KDM5A-208ENST00000541335 SH3BP2P78314 561 aa7.81□□□□□ -1.16
KDM5A-208ENST00000541335 PDE4DQ08499 809 aa7.81□□□□□ -1.16
KDM5A-208ENST00000541335 KCNH2Q12809 1159 aa7.81□□□□□ -1.16
KDM5A-208ENST00000541335 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
KDM5A-208ENST00000541335 C11orf95C9JLR9 678 aaPredicted RBP7.8□□□□□ -1.16
KDM5A-208ENST00000541335 CFAP99D6REC4 459 aa7.8□□□□□ -1.16
KDM5A-208ENST00000541335 ALDH1A1P00352 501 aa7.8□□□□□ -1.16
KDM5A-208ENST00000541335 ATP13A2Q9NQ11 1180 aa7.8□□□□□ -1.16
KDM5A-208ENST00000541335 HRCP23327 699 aa7.79□□□□□ -1.16
KDM5A-208ENST00000541335 LINC01559Q495D7 138 aa7.79□□□□□ -1.16
KDM5A-208ENST00000541335 LYPD8Q6UX82 237 aa7.79□□□□□ -1.16
KDM5A-208ENST00000541335 RIC3Q7Z5B4 369 aa7.79□□□□□ -1.16
KDM5A-208ENST00000541335 BAP1Q92560 729 aa7.79□□□□□ -1.16
KDM5A-208ENST00000541335 ZBTB3Q9H5J0 574 aa7.79□□□□□ -1.16
KDM5A-208ENST00000541335 SLC24A3Q9HC58 644 aa7.79□□□□□ -1.16
KDM5A-208ENST00000541335 CABLES1Q8TDN4 633 aa7.78□□□□□ -1.16
KDM5A-208ENST00000541335 PRPF38BQ5VTL8 546 aaKnown RBP7.77□□□□□ -1.17
KDM5A-208ENST00000541335 MYSM1Q5VVJ2 828 aa7.77□□□□□ -1.17
KDM5A-208ENST00000541335 ZNF511Q8NB15 262 aa7.77□□□□□ -1.17
KDM5A-208ENST00000541335 LIMD1Q9UGP4 676 aa7.77□□□□□ -1.17
KDM5A-208ENST00000541335 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
KDM5A-208ENST00000541335 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
KDM5A-208ENST00000541335 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
KDM5A-208ENST00000541335 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms