RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 SUZ12Q15022 739 aaKnown RBP10.81□□□□□ -0.68
RAP1B-224ENST00000541216 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
RAP1B-224ENST00000541216 J3QL48 77 aa10.8□□□□□ -0.68
RAP1B-224ENST00000541216 REPIN1Q9BWE0 567 aaKnown RBP10.8□□□□□ -0.68
RAP1B-224ENST00000541216 SALL2Q9Y467 1007 aaPredicted RBP10.8□□□□□ -0.68
RAP1B-224ENST00000541216 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
RAP1B-224ENST00000541216 MRGPRX2Q96LB1 330 aa10.79□□□□□ -0.68
RAP1B-224ENST00000541216 LORP23490 312 aaPredicted RBP10.78□□□□□ -0.68
RAP1B-224ENST00000541216 PXYLP1Q8TE99 480 aa10.78□□□□□ -0.68
RAP1B-224ENST00000541216 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
RAP1B-224ENST00000541216 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
RAP1B-224ENST00000541216 MLLT3P42568 568 aaPredicted RBP10.77□□□□□ -0.69
RAP1B-224ENST00000541216 HPS1Q92902 700 aa10.77□□□□□ -0.69
RAP1B-224ENST00000541216 TRIM32Q13049 653 aa10.76□□□□□ -0.69
RAP1B-224ENST00000541216 FUT2Q10981 343 aa10.75□□□□□ -0.69
RAP1B-224ENST00000541216 MSS51Q4VC12 460 aa10.75□□□□□ -0.69
RAP1B-224ENST00000541216 RDH13Q8NBN7 331 aa10.75□□□□□ -0.69
RAP1B-224ENST00000541216 PRDM9Q9NQV7 894 aa10.75□□□□□ -0.69
RAP1B-224ENST00000541216 SLC27A5Q9Y2P5 690 aa10.75□□□□□ -0.69
RAP1B-224ENST00000541216 FCHSD2O94868 740 aa10.74□□□□□ -0.69
RAP1B-224ENST00000541216 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
RAP1B-224ENST00000541216 FECHP22830 423 aa10.71□□□□□ -0.69
RAP1B-224ENST00000541216 BCANQ96GW7 911 aa10.7□□□□□ -0.7
RAP1B-224ENST00000541216 H3BM21 787 aa10.69□□□□□ -0.7
RAP1B-224ENST00000541216 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
RAP1B-224ENST00000541216 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
RAP1B-224ENST00000541216 GRIPAP1Q4V328 841 aa10.67□□□□□ -0.7
RAP1B-224ENST00000541216 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
RAP1B-224ENST00000541216 GCGRP47871 477 aa10.65□□□□□ -0.7
RAP1B-224ENST00000541216 MMP16P51512 607 aa10.65□□□□□ -0.7
RAP1B-224ENST00000541216 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
RAP1B-224ENST00000541216 SEMA3EO15041 775 aa10.64□□□□□ -0.71
RAP1B-224ENST00000541216 VEGFBP49765 207 aa10.64□□□□□ -0.71
RAP1B-224ENST00000541216 WNT7BP56706 349 aa10.64□□□□□ -0.71
RAP1B-224ENST00000541216 Q3C1V9 767 aa10.64□□□□□ -0.71
RAP1B-224ENST00000541216 RNF19BQ6ZMZ0 732 aa10.63□□□□□ -0.71
RAP1B-224ENST00000541216 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
RAP1B-224ENST00000541216 ERBB4Q15303 1308 aa10.62□□□□□ -0.71
RAP1B-224ENST00000541216 TESPA1A2RU30 521 aaPredicted RBP10.62□□□□□ -0.71
RAP1B-224ENST00000541216 ALDH1A1P00352 501 aa10.62□□□□□ -0.71
RAP1B-224ENST00000541216 KCNMA1Q12791 1236 aa10.62□□□□□ -0.71
RAP1B-224ENST00000541216 CAPN5O15484 640 aaPredicted RBP10.6□□□□□ -0.71
RAP1B-224ENST00000541216 HIC1Q14526 733 aa10.6□□□□□ -0.71
RAP1B-224ENST00000541216 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
RAP1B-224ENST00000541216 BMP1P13497 986 aa10.59□□□□□ -0.71
RAP1B-224ENST00000541216 KCTD17Q8N5Z5 321 aa10.59□□□□□ -0.71
RAP1B-224ENST00000541216 SKOR1P84550 965 aa10.57□□□□□ -0.72
RAP1B-224ENST00000541216 CCDC24Q8N4L8 307 aa10.57□□□□□ -0.72
RAP1B-224ENST00000541216 DXOO77932 396 aaKnown RBP10.56□□□□□ -0.72
RAP1B-224ENST00000541216 WASF2Q9Y6W5 498 aa10.56□□□□□ -0.72
RAP1B-224ENST00000541216 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
RAP1B-224ENST00000541216 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
RAP1B-224ENST00000541216 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
RAP1B-224ENST00000541216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.51□□□□□ -0.73
RAP1B-224ENST00000541216 ZFP42Q96MM3 310 aa10.51□□□□□ -0.73
RAP1B-224ENST00000541216 EHBP1Q8NDI1 1231 aa10.5□□□□□ -0.73
RAP1B-224ENST00000541216 SIAH2O43255 324 aa10.49□□□□□ -0.73
RAP1B-224ENST00000541216 GSK3AP49840 483 aa10.48□□□□□ -0.73
RAP1B-224ENST00000541216 RNF225M0QZC1 329 aaPredicted RBP10.47□□□□□ -0.73
RAP1B-224ENST00000541216 GNPATO15228 680 aa10.47□□□□□ -0.73
RAP1B-224ENST00000541216 GDF11O95390 407 aa10.47□□□□□ -0.73
RAP1B-224ENST00000541216 SCARF1Q14162 830 aa10.46□□□□□ -0.73
RAP1B-224ENST00000541216 RASSF7Q02833 373 aa10.45□□□□□ -0.74
RAP1B-224ENST00000541216 SMYD5Q6GMV2 418 aa10.45□□□□□ -0.74
RAP1B-224ENST00000541216 NLRP7Q8WX94 980 aa10.45□□□□□ -0.74
RAP1B-224ENST00000541216 RBM26Q5T8P6 1007 aaKnown RBP10.43□□□□□ -0.74
RAP1B-224ENST00000541216 MRPL14Q6P1L8 145 aaKnown RBP10.42□□□□□ -0.74
RAP1B-224ENST00000541216 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
RAP1B-224ENST00000541216 KDM4AO75164 1064 aa10.4□□□□□ -0.74
RAP1B-224ENST00000541216 JUNDP17535 347 aa10.4□□□□□ -0.74
RAP1B-224ENST00000541216 USP46P62068 366 aa10.39□□□□□ -0.75
RAP1B-224ENST00000541216 PLEKHG3A1L390 1219 aa10.38□□□□□ -0.75
RAP1B-224ENST00000541216 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
RAP1B-224ENST00000541216 GPR37O15354 613 aa10.37□□□□□ -0.75
RAP1B-224ENST00000541216 CD46P15529 392 aa10.37□□□□□ -0.75
RAP1B-224ENST00000541216 PHOX2BQ99453 314 aa10.36□□□□□ -0.75
RAP1B-224ENST00000541216 NUDT12Q9BQG2 462 aa10.36□□□□□ -0.75
RAP1B-224ENST00000541216 IGHA1P01876 353 aa10.35□□□□□ -0.75
RAP1B-224ENST00000541216 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
RAP1B-224ENST00000541216 SH3BP2P78314 561 aa10.34□□□□□ -0.75
RAP1B-224ENST00000541216 PTCRAQ6ISU1 281 aaPredicted RBP10.34□□□□□ -0.75
RAP1B-224ENST00000541216 ADAMTS8Q9UP79 889 aa10.34□□□□□ -0.75
RAP1B-224ENST00000541216 NNTQ13423 1086 aa10.33□□□□□ -0.76
RAP1B-224ENST00000541216 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
RAP1B-224ENST00000541216 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
RAP1B-224ENST00000541216 MAN1A2O60476 641 aa10.32□□□□□ -0.76
RAP1B-224ENST00000541216 PPFIA3O75145 1194 aa10.32□□□□□ -0.76
RAP1B-224ENST00000541216 MPNDQ8N594 471 aa10.32□□□□□ -0.76
RAP1B-224ENST00000541216 ADH1CP00326 375 aa10.31□□□□□ -0.76
RAP1B-224ENST00000541216 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
RAP1B-224ENST00000541216 TPRNQ4KMQ1 711 aa10.31□□□□□ -0.76
RAP1B-224ENST00000541216 TIMP2P16035 220 aa10.3□□□□□ -0.76
RAP1B-224ENST00000541216 WDR4P57081 412 aaKnown RBP10.3□□□□□ -0.76
RAP1B-224ENST00000541216 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
RAP1B-224ENST00000541216 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
RAP1B-224ENST00000541216 GPAT2Q6NUI2 795 aa10.29□□□□□ -0.76
RAP1B-224ENST00000541216 HLA-CQ95604 372 aa10.29□□□□□ -0.76
RAP1B-224ENST00000541216 TLL2Q9Y6L7 1015 aa10.29□□□□□ -0.76
RAP1B-224ENST00000541216 HOXA2O43364 376 aa10.28□□□□□ -0.76
RAP1B-224ENST00000541216 ZMYND10O75800 440 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms