RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 RNF19BQ6ZMZ0 732 aa12.05□□□□□ -0.48
TTR-203ENST00000541025 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
TTR-203ENST00000541025 REPIN1Q9BWE0 567 aaKnown RBP12.05□□□□□ -0.48
TTR-203ENST00000541025 HOXA2O43364 376 aa12.03□□□□□ -0.48
TTR-203ENST00000541025 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.48
TTR-203ENST00000541025 RPIAP49247 311 aa12.02□□□□□ -0.49
TTR-203ENST00000541025 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.49
TTR-203ENST00000541025 AK7Q96M32 723 aa12.02□□□□□ -0.49
TTR-203ENST00000541025 USB1Q9BQ65 265 aaKnown RBP12.02□□□□□ -0.49
TTR-203ENST00000541025 TTLL12Q14166 644 aaPredicted RBP12.01□□□□□ -0.49
TTR-203ENST00000541025 ZNF697Q5TEC3 545 aa12.01□□□□□ -0.49
TTR-203ENST00000541025 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
TTR-203ENST00000541025 FCF1Q9Y324 198 aaKnown RBP12□□□□□ -0.49
TTR-203ENST00000541025 TRIM66O15016 1216 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 CD2BP2O95400 341 aaKnown RBP11.99□□□□□ -0.49
TTR-203ENST00000541025 PRR20EP86478 221 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 PRR20CP86479 221 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 PRR20DP86480 221 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 PRR20BP86481 221 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 PRR20AP86496 221 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 TRIM67Q6ZTA4 783 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
TTR-203ENST00000541025 MMP16P51512 607 aa11.98□□□□□ -0.49
TTR-203ENST00000541025 GIGYF2Q6Y7W6 1299 aaKnown RBP11.97□□□□□ -0.49
TTR-203ENST00000541025 HLA-CQ95604 372 aa11.97□□□□□ -0.49
TTR-203ENST00000541025 PRDM9Q9NQV7 894 aa11.97□□□□□ -0.49
TTR-203ENST00000541025 ZBTB24O43167 697 aaPredicted RBP11.95□□□□□ -0.5
TTR-203ENST00000541025 GDF9O60383 454 aa11.95□□□□□ -0.5
TTR-203ENST00000541025 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
TTR-203ENST00000541025 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
TTR-203ENST00000541025 FDX1P10109 184 aa11.93□□□□□ -0.5
TTR-203ENST00000541025 GUCA2AQ02747 115 aa11.93□□□□□ -0.5
TTR-203ENST00000541025 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
TTR-203ENST00000541025 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
TTR-203ENST00000541025 DGAT1O75907 488 aa11.91□□□□□ -0.5
TTR-203ENST00000541025 PARP9Q8IXQ6 854 aa11.91□□□□□ -0.5
TTR-203ENST00000541025 BEGAINQ9BUH8 593 aa11.91□□□□□ -0.5
TTR-203ENST00000541025 RETREG3Q86VR2 466 aa11.9□□□□□ -0.5
TTR-203ENST00000541025 MROH2BQ7Z745 1585 aa11.89□□□□□ -0.51
TTR-203ENST00000541025 LCE2BO14633 110 aa11.89□□□□□ -0.51
TTR-203ENST00000541025 SYMPKQ92797 1274 aaKnown RBP11.89□□□□□ -0.51
TTR-203ENST00000541025 PCDHGC3Q9UN70 934 aa11.89□□□□□ -0.51
TTR-203ENST00000541025 GJA5P36382 358 aa11.88□□□□□ -0.51
TTR-203ENST00000541025 BCANQ96GW7 911 aa11.88□□□□□ -0.51
TTR-203ENST00000541025 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
TTR-203ENST00000541025 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
TTR-203ENST00000541025 TNFRSF10AO00220 468 aa11.87□□□□□ -0.51
TTR-203ENST00000541025 JUNDP17535 347 aa11.87□□□□□ -0.51
TTR-203ENST00000541025 PDE4DQ08499 809 aa11.87□□□□□ -0.51
TTR-203ENST00000541025 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
TTR-203ENST00000541025 ATAD2BQ9ULI0 1458 aa11.87□□□□□ -0.51
TTR-203ENST00000541025 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
TTR-203ENST00000541025 NDUFV2P19404 249 aa11.86□□□□□ -0.51
TTR-203ENST00000541025 FOXC1Q12948 553 aa11.86□□□□□ -0.51
TTR-203ENST00000541025 PKDCCQ504Y2 493 aa11.86□□□□□ -0.51
TTR-203ENST00000541025 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
TTR-203ENST00000541025 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
TTR-203ENST00000541025 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
TTR-203ENST00000541025 NCAPD3P42695 1498 aa11.84□□□□□ -0.51
TTR-203ENST00000541025 SPDYE5A6NIY4 337 aa11.84□□□□□ -0.51
TTR-203ENST00000541025 MS4A1P11836 297 aa11.84□□□□□ -0.51
TTR-203ENST00000541025 CCDC24Q8N4L8 307 aa11.84□□□□□ -0.51
TTR-203ENST00000541025 TRIM32Q13049 653 aa11.83□□□□□ -0.52
TTR-203ENST00000541025 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
TTR-203ENST00000541025 WIZO95785 1651 aa11.81□□□□□ -0.52
TTR-203ENST00000541025 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
TTR-203ENST00000541025 SPTLC1O15269 473 aa11.8□□□□□ -0.52
TTR-203ENST00000541025 MYT1Q01538 1121 aa11.8□□□□□ -0.52
TTR-203ENST00000541025 MTMR2Q13614 643 aa11.8□□□□□ -0.52
TTR-203ENST00000541025 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
TTR-203ENST00000541025 CYP4X1Q8N118 509 aa11.8□□□□□ -0.52
TTR-203ENST00000541025 NUDT12Q9BQG2 462 aa11.8□□□□□ -0.52
TTR-203ENST00000541025 TOR4AQ9NXH8 423 aa11.8□□□□□ -0.52
TTR-203ENST00000541025 WNT7AO00755 349 aa11.79□□□□□ -0.52
TTR-203ENST00000541025 DESI1Q6ICB0 168 aa11.78□□□□□ -0.52
TTR-203ENST00000541025 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
TTR-203ENST00000541025 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
TTR-203ENST00000541025 BAZ1BQ9UIG0 1483 aaKnown RBP11.76□□□□□ -0.53
TTR-203ENST00000541025 WNT7BP56706 349 aa11.76□□□□□ -0.53
TTR-203ENST00000541025 PTPRNQ16849 979 aa11.75□□□□□ -0.53
TTR-203ENST00000541025 PRPF38BQ5VTL8 546 aaKnown RBP11.75□□□□□ -0.53
TTR-203ENST00000541025 EVA1BQ9NVM1 165 aa11.75□□□□□ -0.53
TTR-203ENST00000541025 PCDHB15Q9Y5E8 787 aa11.75□□□□□ -0.53
TTR-203ENST00000541025 TTC24A2A3L6 582 aaPredicted RBP11.74□□□□□ -0.53
TTR-203ENST00000541025 CCNYL3P0C7X3 344 aa11.74□□□□□ -0.53
TTR-203ENST00000541025 PTCRAQ6ISU1 281 aaPredicted RBP11.74□□□□□ -0.53
TTR-203ENST00000541025 SNIP1Q8TAD8 396 aaKnown RBP11.74□□□□□ -0.53
TTR-203ENST00000541025 TUSC1Q2TAM9 212 aa11.73□□□□□ -0.53
TTR-203ENST00000541025 ZNF787Q6DD87 383 aa11.73□□□□□ -0.53
TTR-203ENST00000541025 ZBTB3Q9H5J0 574 aa11.73□□□□□ -0.53
TTR-203ENST00000541025 AVPP01185 164 aa11.72□□□□□ -0.53
TTR-203ENST00000541025 RC3H1Q5TC82 1133 aaKnown RBP11.72□□□□□ -0.53
TTR-203ENST00000541025 MRGPRX2Q96LB1 330 aa11.72□□□□□ -0.53
TTR-203ENST00000541025 HRCP23327 699 aa11.71□□□□□ -0.53
TTR-203ENST00000541025 RSPH6AQ9H0K4 717 aa11.71□□□□□ -0.53
TTR-203ENST00000541025 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
TTR-203ENST00000541025 SKOR1P84550 965 aa11.7□□□□□ -0.54
TTR-203ENST00000541025 KCNH2Q12809 1159 aa11.7□□□□□ -0.54
TTR-203ENST00000541025 MYSM1Q5VVJ2 828 aa11.7□□□□□ -0.54
TTR-203ENST00000541025 LYPD8Q6UX82 237 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms