RNA–Protein interactions for RNA: ENST00000541017.5

PPFIA2-204, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-204ENST00000541017 ARHGAP23Q9P227 1491 aa11.36□□□□□ -0.59
PPFIA2-204ENST00000541017 NRXN1Q9ULB1 1477 aa11.36□□□□□ -0.59
PPFIA2-204ENST00000541017 C19orf44Q9H6X5 657 aa11.35□□□□□ -0.59
PPFIA2-204ENST00000541017 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
PPFIA2-204ENST00000541017 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
PPFIA2-204ENST00000541017 COG3Q96JB2 828 aa11.35□□□□□ -0.59
PPFIA2-204ENST00000541017 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
PPFIA2-204ENST00000541017 LTKP29376 864 aa11.33□□□□□ -0.6
PPFIA2-204ENST00000541017 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
PPFIA2-204ENST00000541017 NLRP13Q86W25 1043 aa11.33□□□□□ -0.6
PPFIA2-204ENST00000541017 PANK3Q9H999 370 aa11.33□□□□□ -0.6
PPFIA2-204ENST00000541017 ALKQ9UM73 1620 aa11.32□□□□□ -0.6
PPFIA2-204ENST00000541017 PTCH1Q13635 1447 aa11.32□□□□□ -0.6
PPFIA2-204ENST00000541017 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
PPFIA2-204ENST00000541017 TRPM1Q7Z4N2 1603 aa11.32□□□□□ -0.6
PPFIA2-204ENST00000541017 TOM1O60784 492 aa11.31□□□□□ -0.6
PPFIA2-204ENST00000541017 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
PPFIA2-204ENST00000541017 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
PPFIA2-204ENST00000541017 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
PPFIA2-204ENST00000541017 PPLO60437 1756 aa11.31□□□□□ -0.6
PPFIA2-204ENST00000541017 NKTRP30414 1462 aaKnown RBP11.31□□□□□ -0.6
PPFIA2-204ENST00000541017 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
PPFIA2-204ENST00000541017 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
PPFIA2-204ENST00000541017 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
PPFIA2-204ENST00000541017 NEFLP07196 543 aa11.3□□□□□ -0.6
PPFIA2-204ENST00000541017 ANKARQ7Z5J8 1434 aa11.3□□□□□ -0.6
PPFIA2-204ENST00000541017 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-204ENST00000541017 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
PPFIA2-204ENST00000541017 SCAF1Q9H7N4 1312 aaKnown RBP11.29□□□□□ -0.6
PPFIA2-204ENST00000541017 TECPR2O15040 1411 aa11.29□□□□□ -0.6
PPFIA2-204ENST00000541017 HSPA2P54652 639 aa11.29□□□□□ -0.6
PPFIA2-204ENST00000541017 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
PPFIA2-204ENST00000541017 ANKRD36BQ8N2N9 1353 aa11.28□□□□□ -0.6
PPFIA2-204ENST00000541017 NPHP3Q7Z494 1330 aa11.28□□□□□ -0.6
PPFIA2-204ENST00000541017 UBR1Q8IWV7 1749 aa11.28□□□□□ -0.6
PPFIA2-204ENST00000541017 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
PPFIA2-204ENST00000541017 ESCO1Q5FWF5 840 aa11.28□□□□□ -0.6
PPFIA2-204ENST00000541017 KCNH5Q8NCM2 988 aa11.28□□□□□ -0.6
PPFIA2-204ENST00000541017 MAPK8IP3Q9UPT6 1336 aa11.27□□□□□ -0.61
PPFIA2-204ENST00000541017 MED14O60244 1454 aa11.27□□□□□ -0.61
PPFIA2-204ENST00000541017 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.61
PPFIA2-204ENST00000541017 NPC1L1Q9UHC9 1359 aa11.26□□□□□ -0.61
PPFIA2-204ENST00000541017 CC2D1BQ5T0F9 858 aaKnown RBP11.26□□□□□ -0.61
PPFIA2-204ENST00000541017 KDM4FA0A1W2PPD8 638 aa11.26□□□□□ -0.61
PPFIA2-204ENST00000541017 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
PPFIA2-204ENST00000541017 TESK2Q96S53 571 aa11.26□□□□□ -0.61
PPFIA2-204ENST00000541017 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
PPFIA2-204ENST00000541017 METP08581 1390 aa11.25□□□□□ -0.61
PPFIA2-204ENST00000541017 CALD1Q05682 793 aaKnown RBP11.25□□□□□ -0.61
PPFIA2-204ENST00000541017 ADGRL3Q9HAR2 1447 aa11.24□□□□□ -0.61
PPFIA2-204ENST00000541017 DCCP43146 1447 aa11.24□□□□□ -0.61
PPFIA2-204ENST00000541017 ADAMTS13Q76LX8 1427 aa11.24□□□□□ -0.61
PPFIA2-204ENST00000541017 ATP7BP35670 1465 aa11.24□□□□□ -0.61
PPFIA2-204ENST00000541017 CPS1P31327 1500 aa11.24□□□□□ -0.61
PPFIA2-204ENST00000541017 AMPHP49418 695 aa11.24□□□□□ -0.61
PPFIA2-204ENST00000541017 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
PPFIA2-204ENST00000541017 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
PPFIA2-204ENST00000541017 PRKRIP1Q9H875 184 aaPredicted RBP11.23□□□□□ -0.61
PPFIA2-204ENST00000541017 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
PPFIA2-204ENST00000541017 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-204ENST00000541017 LMOD3Q0VAK6 560 aa11.22□□□□□ -0.61
PPFIA2-204ENST00000541017 LMTK3Q96Q04 1460 aa11.22□□□□□ -0.61
PPFIA2-204ENST00000541017 EDC4Q6P2E9 1401 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-204ENST00000541017 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
PPFIA2-204ENST00000541017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.21□□□□□ -0.61
PPFIA2-204ENST00000541017 IFT172Q9UG01 1749 aa11.21□□□□□ -0.61
PPFIA2-204ENST00000541017 NUTM2FA1L443 756 aa11.21□□□□□ -0.61
PPFIA2-204ENST00000541017 NLRP6P59044 892 aa11.21□□□□□ -0.61
PPFIA2-204ENST00000541017 SLC12A5Q9H2X9 1139 aa11.21□□□□□ -0.61
PPFIA2-204ENST00000541017 DISP3Q9P2K9 1392 aa11.21□□□□□ -0.62
PPFIA2-204ENST00000541017 ABTB2Q8N961 1025 aa11.21□□□□□ -0.62
PPFIA2-204ENST00000541017 ASXL1Q8IXJ9 1541 aa11.21□□□□□ -0.62
PPFIA2-204ENST00000541017 TMEM94Q12767 1356 aa11.21□□□□□ -0.62
PPFIA2-204ENST00000541017 IQGAP1P46940 1657 aa11.2□□□□□ -0.62
PPFIA2-204ENST00000541017 ARHGEF10O15013 1369 aa11.2□□□□□ -0.62
PPFIA2-204ENST00000541017 PPM1GO15355 546 aaPredicted RBP11.2□□□□□ -0.62
PPFIA2-204ENST00000541017 ADGRB1O14514 1584 aa11.19□□□□□ -0.62
PPFIA2-204ENST00000541017 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
PPFIA2-204ENST00000541017 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
PPFIA2-204ENST00000541017 TULP4Q9NRJ4 1543 aa11.19□□□□□ -0.62
PPFIA2-204ENST00000541017 ZBTB7CA1YPR0 619 aa11.18□□□□□ -0.62
PPFIA2-204ENST00000541017 HMGB2P26583 209 aaKnown RBP11.18□□□□□ -0.62
PPFIA2-204ENST00000541017 ACEP12821 1306 aa11.18□□□□□ -0.62
PPFIA2-204ENST00000541017 MIER1Q8N108 512 aa11.18□□□□□ -0.62
PPFIA2-204ENST00000541017 YTHDC1Q96MU7 727 aaKnown RBP11.18□□□□□ -0.62
PPFIA2-204ENST00000541017 CSB-PGBD3P0DP91 1061 aa11.17□□□□□ -0.62
PPFIA2-204ENST00000541017 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
PPFIA2-204ENST00000541017 DIAPH1O60610 1272 aaKnown RBP11.17□□□□□ -0.62
PPFIA2-204ENST00000541017 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
PPFIA2-204ENST00000541017 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
PPFIA2-204ENST00000541017 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
PPFIA2-204ENST00000541017 POLR1AO95602 1720 aaPredicted RBP11.16□□□□□ -0.62
PPFIA2-204ENST00000541017 LRRC59Q96AG4 307 aaKnown RBP11.16□□□□□ -0.62
PPFIA2-204ENST00000541017 KNDC1Q76NI1 1749 aa11.16□□□□□ -0.62
PPFIA2-204ENST00000541017 TTC21BQ7Z4L5 1316 aa11.16□□□□□ -0.62
PPFIA2-204ENST00000541017 HNRNPUQ00839 825 aaKnown RBP eCLIP11.16□□□□□ -0.62
PPFIA2-204ENST00000541017 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
PPFIA2-204ENST00000541017 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
PPFIA2-204ENST00000541017 TNNT2P45379 298 aaPredicted RBP11.15□□□□□ -0.62
PPFIA2-204ENST00000541017 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms