RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 NRXN3Q9Y4C0 1643 aa13.78□□□□□ -0.2
FOXO3-203ENST00000540898 PPP2R1AP30153 589 aa13.78□□□□□ -0.2
FOXO3-203ENST00000540898 POGKQ9P215 609 aa13.77□□□□□ -0.21
FOXO3-203ENST00000540898 C3P01024 1663 aa13.76□□□□□ -0.21
FOXO3-203ENST00000540898 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
FOXO3-203ENST00000540898 SETD1AO15047 1707 aaKnown RBP13.76□□□□□ -0.21
FOXO3-203ENST00000540898 LRPPRCP42704 1394 aaKnown RBP13.76□□□□□ -0.21
FOXO3-203ENST00000540898 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
FOXO3-203ENST00000540898 UBR1Q8IWV7 1749 aa13.75□□□□□ -0.21
FOXO3-203ENST00000540898 NSD3Q9BZ95 1437 aa13.75□□□□□ -0.21
FOXO3-203ENST00000540898 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
FOXO3-203ENST00000540898 NCKAP5LQ9HCH0 1330 aa13.75□□□□□ -0.21
FOXO3-203ENST00000540898 SLC26A8Q96RN1 970 aa13.75□□□□□ -0.21
FOXO3-203ENST00000540898 FER1L4A9Z1Z3 1794 aa13.74□□□□□ -0.21
FOXO3-203ENST00000540898 TMEM2Q9UHN6 1383 aa13.73□□□□□ -0.21
FOXO3-203ENST00000540898 EVC2Q86UK5 1308 aa13.73□□□□□ -0.21
FOXO3-203ENST00000540898 ADAMTS8Q9UP79 889 aa13.72□□□□□ -0.21
FOXO3-203ENST00000540898 CDK19Q9BWU1 502 aa13.71□□□□□ -0.21
FOXO3-203ENST00000540898 A0A1W2PP64 1363 aa13.7□□□□□ -0.22
FOXO3-203ENST00000540898 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
FOXO3-203ENST00000540898 FBLN1P23142 703 aa13.69□□□□□ -0.22
FOXO3-203ENST00000540898 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
FOXO3-203ENST00000540898 CCDC146Q8IYE0 955 aa13.69□□□□□ -0.22
FOXO3-203ENST00000540898 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
FOXO3-203ENST00000540898 CABP1Q9NZU7 370 aa13.69□□□□□ -0.22
FOXO3-203ENST00000540898 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
FOXO3-203ENST00000540898 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
FOXO3-203ENST00000540898 GGNBP2Q9H3C7 697 aa13.67□□□□□ -0.22
FOXO3-203ENST00000540898 RIMS1Q86UR5 1692 aaKnown RBP13.67□□□□□ -0.22
FOXO3-203ENST00000540898 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
FOXO3-203ENST00000540898 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
FOXO3-203ENST00000540898 MORC1Q86VD1 984 aa13.66□□□□□ -0.22
FOXO3-203ENST00000540898 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
FOXO3-203ENST00000540898 RBM33Q96EV2 1170 aaKnown RBP13.65□□□□□ -0.22
FOXO3-203ENST00000540898 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.23
FOXO3-203ENST00000540898 ABCC11Q96J66 1382 aa13.65□□□□□ -0.23
FOXO3-203ENST00000540898 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
FOXO3-203ENST00000540898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.64□□□□□ -0.23
FOXO3-203ENST00000540898 NPC1L1Q9UHC9 1359 aa13.64□□□□□ -0.23
FOXO3-203ENST00000540898 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
FOXO3-203ENST00000540898 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
FOXO3-203ENST00000540898 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
FOXO3-203ENST00000540898 DEKP35659 375 aaKnown RBP13.62□□□□□ -0.23
FOXO3-203ENST00000540898 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
FOXO3-203ENST00000540898 MTHFSP49914 203 aa13.62□□□□□ -0.23
FOXO3-203ENST00000540898 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
FOXO3-203ENST00000540898 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
FOXO3-203ENST00000540898 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
FOXO3-203ENST00000540898 WASLO00401 505 aaPredicted RBP13.61□□□□□ -0.23
FOXO3-203ENST00000540898 FYB1O15117 783 aa13.61□□□□□ -0.23
FOXO3-203ENST00000540898 PLEKHG1Q9ULL1 1385 aa13.6□□□□□ -0.23
FOXO3-203ENST00000540898 NEFLP07196 543 aa13.6□□□□□ -0.23
FOXO3-203ENST00000540898 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
FOXO3-203ENST00000540898 DLC1Q96QB1 1528 aa13.6□□□□□ -0.23
FOXO3-203ENST00000540898 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
FOXO3-203ENST00000540898 SMG6Q86US8 1419 aaKnown RBP13.59□□□□□ -0.23
FOXO3-203ENST00000540898 EID1Q9Y6B2 187 aa13.59□□□□□ -0.23
FOXO3-203ENST00000540898 AMOTL2Q9Y2J4 779 aa13.59□□□□□ -0.23
FOXO3-203ENST00000540898 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
FOXO3-203ENST00000540898 ATAD2Q6PL18 1390 aa13.59□□□□□ -0.23
FOXO3-203ENST00000540898 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.23
FOXO3-203ENST00000540898 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
FOXO3-203ENST00000540898 NUDT16Q96DE0 195 aaKnown RBP13.58□□□□□ -0.24
FOXO3-203ENST00000540898 APAF1O14727 1248 aa13.58□□□□□ -0.24
FOXO3-203ENST00000540898 MED14O60244 1454 aa13.58□□□□□ -0.24
FOXO3-203ENST00000540898 SLIT1O75093 1534 aa13.57□□□□□ -0.24
FOXO3-203ENST00000540898 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
FOXO3-203ENST00000540898 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
FOXO3-203ENST00000540898 NME9Q86XW9 330 aa13.57□□□□□ -0.24
FOXO3-203ENST00000540898 PUS7Q96PZ0 661 aaKnown RBP13.57□□□□□ -0.24
FOXO3-203ENST00000540898 SPINK5Q9NQ38 1064 aaPredicted RBP13.57□□□□□ -0.24
FOXO3-203ENST00000540898 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
FOXO3-203ENST00000540898 CEP170BQ9Y4F5 1589 aaPredicted RBP13.56□□□□□ -0.24
FOXO3-203ENST00000540898 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
FOXO3-203ENST00000540898 TECPR2O15040 1411 aa13.56□□□□□ -0.24
FOXO3-203ENST00000540898 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
FOXO3-203ENST00000540898 CPS1P31327 1500 aa13.56□□□□□ -0.24
FOXO3-203ENST00000540898 ADAMTSL3P82987 1691 aa13.55□□□□□ -0.24
FOXO3-203ENST00000540898 KCNA6P17658 529 aa13.55□□□□□ -0.24
FOXO3-203ENST00000540898 NEUROD2Q15784 382 aa13.55□□□□□ -0.24
FOXO3-203ENST00000540898 USP32Q8NFA0 1604 aa13.55□□□□□ -0.24
FOXO3-203ENST00000540898 KNDC1Q76NI1 1749 aa13.54□□□□□ -0.24
FOXO3-203ENST00000540898 HDGFL2Q7Z4V5 671 aaPredicted RBP13.54□□□□□ -0.24
FOXO3-203ENST00000540898 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
FOXO3-203ENST00000540898 ATP7BP35670 1465 aa13.53□□□□□ -0.24
FOXO3-203ENST00000540898 PPM1GO15355 546 aaPredicted RBP13.53□□□□□ -0.24
FOXO3-203ENST00000540898 PMFBP1Q8TBY8 1022 aa13.53□□□□□ -0.24
FOXO3-203ENST00000540898 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
FOXO3-203ENST00000540898 PLIN1O60240 522 aa13.51□□□□□ -0.25
FOXO3-203ENST00000540898 TBX22Q9Y458 520 aa13.51□□□□□ -0.25
FOXO3-203ENST00000540898 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
FOXO3-203ENST00000540898 NKTRP30414 1462 aaKnown RBP13.51□□□□□ -0.25
FOXO3-203ENST00000540898 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
FOXO3-203ENST00000540898 NINLQ9Y2I6 1382 aa13.5□□□□□ -0.25
FOXO3-203ENST00000540898 B4GALNT3Q6L9W6 998 aa13.5□□□□□ -0.25
FOXO3-203ENST00000540898 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
FOXO3-203ENST00000540898 ZNF521Q96K83 1311 aa13.5□□□□□ -0.25
FOXO3-203ENST00000540898 SOX12O15370 315 aa13.5□□□□□ -0.25
FOXO3-203ENST00000540898 RGPD8O14715 1765 aaPredicted RBP13.5□□□□□ -0.25
FOXO3-203ENST00000540898 ACEP12821 1306 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms