RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
PHC1-209ENST00000540809 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
PHC1-209ENST00000540809 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.46
PHC1-209ENST00000540809 MTUS2Q5JR59 1369 aa12.15□□□□□ -0.46
PHC1-209ENST00000540809 FOSBP53539 338 aa12.14□□□□□ -0.47
PHC1-209ENST00000540809 GGT6Q6P531 493 aa12.14□□□□□ -0.47
PHC1-209ENST00000540809 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
PHC1-209ENST00000540809 ATP7AQ04656 1500 aa12.13□□□□□ -0.47
PHC1-209ENST00000540809 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
PHC1-209ENST00000540809 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
PHC1-209ENST00000540809 PTPRTO14522 1441 aa12.12□□□□□ -0.47
PHC1-209ENST00000540809 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
PHC1-209ENST00000540809 LOC105371045A0A1W2PR82 267 aa12.12□□□□□ -0.47
PHC1-209ENST00000540809 KCNK17Q96T54 332 aa12.12□□□□□ -0.47
PHC1-209ENST00000540809 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
PHC1-209ENST00000540809 A2MP01023 1474 aa12.12□□□□□ -0.47
PHC1-209ENST00000540809 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
PHC1-209ENST00000540809 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
PHC1-209ENST00000540809 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
PHC1-209ENST00000540809 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
PHC1-209ENST00000540809 EVI5O60447 810 aa12.1□□□□□ -0.47
PHC1-209ENST00000540809 NCOA1Q15788 1441 aa12.1□□□□□ -0.47
PHC1-209ENST00000540809 CEP162Q5TB80 1403 aa12.1□□□□□ -0.47
PHC1-209ENST00000540809 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
PHC1-209ENST00000540809 VPS9D1Q9Y2B5 631 aa12.09□□□□□ -0.47
PHC1-209ENST00000540809 NPATQ14207 1427 aa12.09□□□□□ -0.47
PHC1-209ENST00000540809 PTPRKQ15262 1439 aa12.09□□□□□ -0.47
PHC1-209ENST00000540809 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
PHC1-209ENST00000540809 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
PHC1-209ENST00000540809 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
PHC1-209ENST00000540809 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
PHC1-209ENST00000540809 FBXO31Q5XUX0 539 aaPredicted RBP12.07□□□□□ -0.48
PHC1-209ENST00000540809 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
PHC1-209ENST00000540809 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
PHC1-209ENST00000540809 HCSTQ9UBK5 93 aa12.06□□□□□ -0.48
PHC1-209ENST00000540809 RTEL1-TNFRSF6BF6WH68 1400 aa12.05□□□□□ -0.48
PHC1-209ENST00000540809 KIF3BO15066 747 aa12.05□□□□□ -0.48
PHC1-209ENST00000540809 NCOA2Q15596 1464 aa12.05□□□□□ -0.48
PHC1-209ENST00000540809 EHBP1L1Q8N3D4 1523 aa12.05□□□□□ -0.48
PHC1-209ENST00000540809 ZNF335Q9H4Z2 1342 aaPredicted RBP12.05□□□□□ -0.48
PHC1-209ENST00000540809 KANK4Q5T7N3 995 aaPredicted RBP12.04□□□□□ -0.48
PHC1-209ENST00000540809 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
PHC1-209ENST00000540809 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
PHC1-209ENST00000540809 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
PHC1-209ENST00000540809 ILDR2Q71H61 639 aa12.03□□□□□ -0.48
PHC1-209ENST00000540809 CAMK2BQ13554 666 aa12.02□□□□□ -0.49
PHC1-209ENST00000540809 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
PHC1-209ENST00000540809 ZBED2Q9BTP6 218 aa12.02□□□□□ -0.49
PHC1-209ENST00000540809 CAMSAP2Q08AD1 1489 aa12.02□□□□□ -0.49
PHC1-209ENST00000540809 MAP3K9P80192 1104 aa12.01□□□□□ -0.49
PHC1-209ENST00000540809 ZDHHC16Q969W1 377 aa12.01□□□□□ -0.49
PHC1-209ENST00000540809 MYO3AQ8NEV4 1616 aa12□□□□□ -0.49
PHC1-209ENST00000540809 PTPREP23469 700 aa12□□□□□ -0.49
PHC1-209ENST00000540809 WASHC2CQ9Y4E1 1318 aa12□□□□□ -0.49
PHC1-209ENST00000540809 TCOF1Q13428 1488 aaKnown RBP12□□□□□ -0.49
PHC1-209ENST00000540809 CCDC141Q6ZP82 1450 aa12□□□□□ -0.49
PHC1-209ENST00000540809 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
PHC1-209ENST00000540809 TSPY4P0CV99 314 aa11.99□□□□□ -0.49
PHC1-209ENST00000540809 TSPY10P0CW01 314 aa11.99□□□□□ -0.49
PHC1-209ENST00000540809 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
PHC1-209ENST00000540809 ZNF142P52746 1687 aaPredicted RBP11.99□□□□□ -0.49
PHC1-209ENST00000540809 DNMT1P26358 1616 aaKnown RBP11.98□□□□□ -0.49
PHC1-209ENST00000540809 A2ML1A8K2U0 1454 aa11.98□□□□□ -0.49
PHC1-209ENST00000540809 PLA2R1Q13018 1463 aa11.98□□□□□ -0.49
PHC1-209ENST00000540809 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
PHC1-209ENST00000540809 DISP3Q9P2K9 1392 aa11.98□□□□□ -0.49
PHC1-209ENST00000540809 BBXQ8WY36 941 aaPredicted RBP11.98□□□□□ -0.49
PHC1-209ENST00000540809 KCTD12Q96CX2 325 aaKnown RBP11.98□□□□□ -0.49
PHC1-209ENST00000540809 VPS8Q8N3P4 1428 aa11.96□□□□□ -0.49
PHC1-209ENST00000540809 TNRQ92752 1358 aa11.96□□□□□ -0.49
PHC1-209ENST00000540809 UBAP1LF5GYI3 381 aa11.96□□□□□ -0.49
PHC1-209ENST00000540809 PLA2G2EQ9NZK7 142 aa11.96□□□□□ -0.49
PHC1-209ENST00000540809 IQSEC2Q5JU85 1478 aa11.95□□□□□ -0.5
PHC1-209ENST00000540809 MIA2Q96PC5 1412 aa11.95□□□□□ -0.5
PHC1-209ENST00000540809 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
PHC1-209ENST00000540809 PZPP20742 1482 aa11.95□□□□□ -0.5
PHC1-209ENST00000540809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.94□□□□□ -0.5
PHC1-209ENST00000540809 KDM5DQ9BY66 1539 aa11.93□□□□□ -0.5
PHC1-209ENST00000540809 THEMISQ8N1K5 641 aaPredicted RBP11.93□□□□□ -0.5
PHC1-209ENST00000540809 ANKLE2Q86XL3 938 aa11.92□□□□□ -0.5
PHC1-209ENST00000540809 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
PHC1-209ENST00000540809 COL9A1P20849 921 aa11.91□□□□□ -0.5
PHC1-209ENST00000540809 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
PHC1-209ENST00000540809 PHF14O94880 888 aa11.9□□□□□ -0.5
PHC1-209ENST00000540809 MYOM3Q5VTT5 1437 aa11.9□□□□□ -0.5
PHC1-209ENST00000540809 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
PHC1-209ENST00000540809 MAP3K1Q13233 1512 aa11.9□□□□□ -0.5
PHC1-209ENST00000540809 CFAP65Q6ZU64 1925 aaKnown RBP11.9□□□□□ -0.51
PHC1-209ENST00000540809 MAST1Q9Y2H9 1570 aa11.89□□□□□ -0.51
PHC1-209ENST00000540809 PPP1R3GB7ZBB8 358 aa11.89□□□□□ -0.51
PHC1-209ENST00000540809 DPYSL4O14531 572 aa11.89□□□□□ -0.51
PHC1-209ENST00000540809 RRP7BPQ9NSQ0 103 aa11.89□□□□□ -0.51
PHC1-209ENST00000540809 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
PHC1-209ENST00000540809 ABCC3O15438 1527 aa11.88□□□□□ -0.51
PHC1-209ENST00000540809 FAM135AQ9P2D6 1515 aa11.88□□□□□ -0.51
PHC1-209ENST00000540809 SOCS7O14512 581 aa11.88□□□□□ -0.51
PHC1-209ENST00000540809 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
PHC1-209ENST00000540809 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
PHC1-209ENST00000540809 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
PHC1-209ENST00000540809 UGGT1Q9NYU2 1555 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms