RNA–Protein interactions for RNA: ENST00000540771.5

RAB6A-206, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB6A, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-206ENST00000540771 ATF3P18847 181 aa31.75■■■□□ 2.67
RAB6A-206ENST00000540771 CADPS2Q86UW7 1296 aa31.75■■■□□ 2.67
RAB6A-206ENST00000540771 SAFB2Q14151 953 aaKnown RBP eCLIP31.74■■■□□ 2.67
RAB6A-206ENST00000540771 ARHGEF28Q8N1W1 1705 aaKnown RBP31.73■■■□□ 2.67
RAB6A-206ENST00000540771 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.73■■■□□ 2.67
RAB6A-206ENST00000540771 NALCNQ8IZF0 1738 aa31.72■■■□□ 2.67
RAB6A-206ENST00000540771 FBXO41Q8TF61 875 aa31.71■■■□□ 2.67
RAB6A-206ENST00000540771 CENPJQ9HC77 1338 aaPredicted RBP31.7■■■□□ 2.66
RAB6A-206ENST00000540771 SLAIN2Q9P270 581 aa31.68■■■□□ 2.66
RAB6A-206ENST00000540771 EIF3AQ14152 1382 aaKnown RBP31.68■■■□□ 2.66
RAB6A-206ENST00000540771 MINK1Q8N4C8 1332 aaPredicted RBP31.66■■■□□ 2.66
RAB6A-206ENST00000540771 CDC42BPGQ6DT37 1551 aa31.64■■■□□ 2.66
RAB6A-206ENST00000540771 MST1RQ04912 1400 aa31.62■■■□□ 2.65
RAB6A-206ENST00000540771 HIRIP3Q9BW71 556 aaPredicted RBP31.62■■■□□ 2.65
RAB6A-206ENST00000540771 PIP4K2BP78356 416 aa31.61■■■□□ 2.65
RAB6A-206ENST00000540771 ADGRB2O60241 1585 aa31.6■■■□□ 2.65
RAB6A-206ENST00000540771 WASLO00401 505 aaPredicted RBP31.59■■■□□ 2.65
RAB6A-206ENST00000540771 ILDR1Q86SU0 546 aaPredicted RBP31.58■■■□□ 2.65
RAB6A-206ENST00000540771 USP47Q96K76 1375 aa31.56■■■□□ 2.64
RAB6A-206ENST00000540771 SCAF1Q9H7N4 1312 aaKnown RBP31.56■■■□□ 2.64
RAB6A-206ENST00000540771 C1orf167Q5SNV9 1468 aa31.55■■■□□ 2.64
RAB6A-206ENST00000540771 ST20-MTHFSA0A0A6YYL1 179 aa31.54■■■□□ 2.64
RAB6A-206ENST00000540771 SBNO2Q9Y2G9 1366 aa31.54■■■□□ 2.64
RAB6A-206ENST00000540771 QRICH2Q9H0J4 1663 aa31.53■■■□□ 2.64
RAB6A-206ENST00000540771 NUTM2FA1L443 756 aa31.52■■■□□ 2.64
RAB6A-206ENST00000540771 CDK19Q9BWU1 502 aa31.52■■■□□ 2.64
RAB6A-206ENST00000540771 FMN2Q9NZ56 1722 aa31.52■■■□□ 2.64
RAB6A-206ENST00000540771 BRINP3Q76B58 766 aa31.5■■■□□ 2.63
RAB6A-206ENST00000540771 ANKARQ7Z5J8 1434 aa31.49■■■□□ 2.63
RAB6A-206ENST00000540771 TESK2Q96S53 571 aa31.48■■■□□ 2.63
RAB6A-206ENST00000540771 ORAI2Q96SN7 254 aa31.48■■■□□ 2.63
RAB6A-206ENST00000540771 EVC2Q86UK5 1308 aa31.48■■■□□ 2.63
RAB6A-206ENST00000540771 ROBO1Q9Y6N7 1651 aa31.46■■■□□ 2.63
RAB6A-206ENST00000540771 SLC24A1O60721 1099 aa31.46■■■□□ 2.63
RAB6A-206ENST00000540771 EIF4G2P78344 907 aaKnown RBP eCLIP31.46■■■□□ 2.63
RAB6A-206ENST00000540771 ESCO1Q5FWF5 840 aa31.46■■■□□ 2.63
RAB6A-206ENST00000540771 TULP4Q9NRJ4 1543 aa31.45■■■□□ 2.63
RAB6A-206ENST00000540771 PRR36Q9H6K5 1346 aa31.45■■■□□ 2.62
RAB6A-206ENST00000540771 NUDT16Q96DE0 195 aaKnown RBP31.43■■■□□ 2.62
RAB6A-206ENST00000540771 ZEB1P37275 1124 aaPredicted RBP31.42■■■□□ 2.62
RAB6A-206ENST00000540771 SRPK2P78362 688 aaKnown RBP31.42■■■□□ 2.62
RAB6A-206ENST00000540771 CABP2Q9NPB3 220 aa31.41■■■□□ 2.62
RAB6A-206ENST00000540771 USP32Q8NFA0 1604 aa31.4■■■□□ 2.62
RAB6A-206ENST00000540771 HSPA5P11021 654 aaKnown RBP31.39■■■□□ 2.62
RAB6A-206ENST00000540771 ATP7BP35670 1465 aa31.39■■■□□ 2.62
RAB6A-206ENST00000540771 PHF8Q9UPP1 1060 aa31.38■■■□□ 2.61
RAB6A-206ENST00000540771 CCDC61Q9Y6R9 512 aa31.38■■■□□ 2.61
RAB6A-206ENST00000540771 HSPA1LP34931 641 aa31.36■■■□□ 2.61
RAB6A-206ENST00000540771 PUS7Q96PZ0 661 aaKnown RBP31.35■■■□□ 2.61
RAB6A-206ENST00000540771 TMF1P82094 1093 aa31.34■■■□□ 2.61
RAB6A-206ENST00000540771 RGPD8O14715 1765 aaPredicted RBP31.33■■■□□ 2.61
RAB6A-206ENST00000540771 AHDC1Q5TGY3 1603 aaPredicted RBP31.32■■■□□ 2.6
RAB6A-206ENST00000540771 FOXO3O43524 673 aa31.32■■■□□ 2.6
RAB6A-206ENST00000540771 PMFBP1Q8TBY8 1022 aa31.31■■■□□ 2.6
RAB6A-206ENST00000540771 DDX17Q92841 729 aaKnown RBP31.31■■■□□ 2.6
RAB6A-206ENST00000540771 NPHP3Q7Z494 1330 aa31.3■■■□□ 2.6
RAB6A-206ENST00000540771 PLEKHG3A1L390 1219 aa31.3■■■□□ 2.6
RAB6A-206ENST00000540771 ATAD2Q6PL18 1390 aa31.3■■■□□ 2.6
RAB6A-206ENST00000540771 KIF1AQ12756 1690 aa31.29■■■□□ 2.6
RAB6A-206ENST00000540771 DISP3Q9P2K9 1392 aa31.29■■■□□ 2.6
RAB6A-206ENST00000540771 NHSL1Q5SYE7 1610 aa31.28■■■□□ 2.6
RAB6A-206ENST00000540771 SOS2Q07890 1332 aaPredicted RBP31.27■■■□□ 2.6
RAB6A-206ENST00000540771 PPIP5K1Q6PFW1 1433 aa31.26■■■□□ 2.6
RAB6A-206ENST00000540771 CDCA8Q53HL2 280 aa31.26■■■□□ 2.59
RAB6A-206ENST00000540771 CABP1Q9NZU7 370 aa31.26■■■□□ 2.59
RAB6A-206ENST00000540771 ITSN1Q15811 1721 aa31.26■■■□□ 2.59
RAB6A-206ENST00000540771 TOPAZ1Q8N9V7 1692 aa31.25■■■□□ 2.59
RAB6A-206ENST00000540771 NGDNQ8NEJ9 315 aaKnown RBP31.25■■■□□ 2.59
RAB6A-206ENST00000540771 PHLPP1O60346 1717 aa31.24■■■□□ 2.59
RAB6A-206ENST00000540771 POLR3AO14802 1390 aaPredicted RBP31.23■■■□□ 2.59
RAB6A-206ENST00000540771 PSME1Q06323 249 aa31.22■■■□□ 2.59
RAB6A-206ENST00000540771 KRT28Q7Z3Y7 464 aa31.22■■■□□ 2.59
RAB6A-206ENST00000540771 ACEP12821 1306 aa31.22■■■□□ 2.59
RAB6A-206ENST00000540771 COL16A1Q07092 1604 aaPredicted RBP31.21■■■□□ 2.59
RAB6A-206ENST00000540771 LRRC59Q96AG4 307 aaKnown RBP31.21■■■□□ 2.59
RAB6A-206ENST00000540771 PXDNQ92626 1479 aa31.21■■■□□ 2.59
RAB6A-206ENST00000540771 XPCQ01831 940 aaPredicted RBP31.2■■■□□ 2.59
RAB6A-206ENST00000540771 TMC1Q8TDI8 760 aa31.15■■■□□ 2.58
RAB6A-206ENST00000540771 SLC12A5Q9H2X9 1139 aa31.15■■■□□ 2.58
RAB6A-206ENST00000540771 NINLQ9Y2I6 1382 aa31.14■■■□□ 2.58
RAB6A-206ENST00000540771 ZNF692Q9BU19 519 aaPredicted RBP31.13■■■□□ 2.57
RAB6A-206ENST00000540771 SBNO1A3KN83 1393 aa31.13■■■□□ 2.57
RAB6A-206ENST00000540771 JCADQ9P266 1359 aa31.13■■■□□ 2.57
RAB6A-206ENST00000540771 C11orf95C9JLR9 678 aaPredicted RBP31.12■■■□□ 2.57
RAB6A-206ENST00000540771 SPATA31A3Q5VYP0 1347 aa31.11■■■□□ 2.57
RAB6A-206ENST00000540771 CPSF1Q10570 1443 aaKnown RBP31.1■■■□□ 2.57
RAB6A-206ENST00000540771 BRD4O60885 1362 aaPredicted RBP31.08■■■□□ 2.57
RAB6A-206ENST00000540771 TERF2IPQ9NYB0 399 aa31.07■■■□□ 2.56
RAB6A-206ENST00000540771 CD163L1Q9NR16 1453 aa31.07■■■□□ 2.56
RAB6A-206ENST00000540771 USP6P35125 1406 aa31.07■■■□□ 2.56
RAB6A-206ENST00000540771 HDGFL2Q7Z4V5 671 aaPredicted RBP31.06■■■□□ 2.56
RAB6A-206ENST00000540771 TNS3Q68CZ2 1445 aa31.06■■■□□ 2.56
RAB6A-206ENST00000540771 PNPLA6Q8IY17 1366 aa31.05■■■□□ 2.56
RAB6A-206ENST00000540771 POLR3GLQ9BT43 218 aa31.04■■■□□ 2.56
RAB6A-206ENST00000540771 TRPM3Q9HCF6 1732 aaPredicted RBP31.04■■■□□ 2.56
RAB6A-206ENST00000540771 KTN1Q86UP2 1357 aaKnown RBP31.04■■■□□ 2.56
RAB6A-206ENST00000540771 PAK3O75914 559 aaPredicted RBP31.03■■■□□ 2.56
RAB6A-206ENST00000540771 SSH2Q76I76 1423 aa31.03■■■□□ 2.56
RAB6A-206ENST00000540771 KIF7Q2M1P5 1343 aa31.02■■■□□ 2.56
RAB6A-206ENST00000540771 SHPRHQ149N8 1683 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms