RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 MOXD2PA6NHM9 499 aa8.82□□□□□ -1
MDM2-227ENST00000540709 GFRA3O60609 400 aa8.81□□□□□ -1
MDM2-227ENST00000540709 PLA2G2CQ5R387 149 aa8.81□□□□□ -1
MDM2-227ENST00000540709 LIAT1Q6ZQX7 453 aa8.81□□□□□ -1
MDM2-227ENST00000540709 TBC1D2Q9BYX2 928 aa8.81□□□□□ -1
MDM2-227ENST00000540709 CCDC24Q8N4L8 307 aa8.8□□□□□ -1
MDM2-227ENST00000540709 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
MDM2-227ENST00000540709 CSPP1Q1MSJ5 1256 aa8.79□□□□□ -1
MDM2-227ENST00000540709 MSS51Q4VC12 460 aa8.79□□□□□ -1
MDM2-227ENST00000540709 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
MDM2-227ENST00000540709 SPRYD7Q5W111 196 aa8.78□□□□□ -1
MDM2-227ENST00000540709 EMID1Q96A84 441 aaPredicted RBP8.78□□□□□ -1
MDM2-227ENST00000540709 ATP1B4Q9UN42 357 aaPredicted RBP8.78□□□□□ -1
MDM2-227ENST00000540709 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
MDM2-227ENST00000540709 Q6ZNB5 142 aa8.77□□□□□ -1.01
MDM2-227ENST00000540709 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
MDM2-227ENST00000540709 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1.01
MDM2-227ENST00000540709 ZNF697Q5TEC3 545 aa8.76□□□□□ -1.01
MDM2-227ENST00000540709 FOXC1Q12948 553 aa8.75□□□□□ -1.01
MDM2-227ENST00000540709 ZNF598Q86UK7 904 aaKnown RBP8.75□□□□□ -1.01
MDM2-227ENST00000540709 RETREG3Q86VR2 466 aa8.75□□□□□ -1.01
MDM2-227ENST00000540709 PCDHB15Q9Y5E8 787 aa8.75□□□□□ -1.01
MDM2-227ENST00000540709 TNFRSF10AO00220 468 aa8.74□□□□□ -1.01
MDM2-227ENST00000540709 CD2BP2O95400 341 aaKnown RBP8.74□□□□□ -1.01
MDM2-227ENST00000540709 TPRNQ4KMQ1 711 aa8.74□□□□□ -1.01
MDM2-227ENST00000540709 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
MDM2-227ENST00000540709 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
MDM2-227ENST00000540709 MMP16P51512 607 aa8.73□□□□□ -1.01
MDM2-227ENST00000540709 MTMR2Q13614 643 aa8.73□□□□□ -1.01
MDM2-227ENST00000540709 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
MDM2-227ENST00000540709 KDM4CQ9H3R0 1056 aa8.73□□□□□ -1.01
MDM2-227ENST00000540709 POLR3EQ9NVU0 708 aa8.73□□□□□ -1.01
MDM2-227ENST00000540709 JUNDP17535 347 aa8.72□□□□□ -1.01
MDM2-227ENST00000540709 LAPTM4AQ15012 233 aa8.72□□□□□ -1.01
MDM2-227ENST00000540709 PRR7Q8TB68 274 aa8.72□□□□□ -1.01
MDM2-227ENST00000540709 TSC1Q92574 1164 aa8.72□□□□□ -1.01
MDM2-227ENST00000540709 NUTM2BA6NNL0 878 aaPredicted RBP8.71□□□□□ -1.02
MDM2-227ENST00000540709 NUTM2EB1AL46 878 aaPredicted RBP8.71□□□□□ -1.02
MDM2-227ENST00000540709 RPIAP49247 311 aa8.71□□□□□ -1.02
MDM2-227ENST00000540709 NUTM2DQ5VT03 806 aaPredicted RBP8.71□□□□□ -1.02
MDM2-227ENST00000540709 MYSM1Q5VVJ2 828 aa8.71□□□□□ -1.02
MDM2-227ENST00000540709 NUTM2AQ8IVF1 878 aaPredicted RBP8.71□□□□□ -1.02
MDM2-227ENST00000540709 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
MDM2-227ENST00000540709 SPTLC1O15269 473 aa8.7□□□□□ -1.02
MDM2-227ENST00000540709 LIMD1Q9UGP4 676 aa8.7□□□□□ -1.02
MDM2-227ENST00000540709 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
MDM2-227ENST00000540709 NEUROD2Q15784 382 aa8.69□□□□□ -1.02
MDM2-227ENST00000540709 NUDT12Q9BQG2 462 aa8.69□□□□□ -1.02
MDM2-227ENST00000540709 FAM117AQ9C073 453 aa8.69□□□□□ -1.02
MDM2-227ENST00000540709 RSPH6AQ9H0K4 717 aa8.69□□□□□ -1.02
MDM2-227ENST00000540709 ZBTB3Q9H5J0 574 aa8.69□□□□□ -1.02
MDM2-227ENST00000540709 SPDYE5A6NIY4 337 aa8.68□□□□□ -1.02
MDM2-227ENST00000540709 HRCP23327 699 aa8.68□□□□□ -1.02
MDM2-227ENST00000540709 TRIM32Q13049 653 aa8.68□□□□□ -1.02
MDM2-227ENST00000540709 TRIM67Q6ZTA4 783 aa8.68□□□□□ -1.02
MDM2-227ENST00000540709 CTHP32929 405 aa8.66□□□□□ -1.02
MDM2-227ENST00000540709 GJA5P36382 358 aa8.66□□□□□ -1.02
MDM2-227ENST00000540709 CLK2P49760 499 aaKnown RBP8.66□□□□□ -1.02
MDM2-227ENST00000540709 QPCTQ16769 361 aa8.66□□□□□ -1.02
MDM2-227ENST00000540709 FAM187AA6NFU0 413 aa8.65□□□□□ -1.02
MDM2-227ENST00000540709 CFAP99D6REC4 459 aa8.65□□□□□ -1.02
MDM2-227ENST00000540709 GDF9O60383 454 aa8.65□□□□□ -1.02
MDM2-227ENST00000540709 CCNYL3P0C7X3 344 aa8.65□□□□□ -1.02
MDM2-227ENST00000540709 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.02
MDM2-227ENST00000540709 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
MDM2-227ENST00000540709 PKDCCQ504Y2 493 aa8.64□□□□□ -1.03
MDM2-227ENST00000540709 TRAF7Q6Q0C0 670 aa8.64□□□□□ -1.03
MDM2-227ENST00000540709 PKD2L1Q9P0L9 805 aa8.64□□□□□ -1.03
MDM2-227ENST00000540709 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
MDM2-227ENST00000540709 PTPRNQ16849 979 aa8.63□□□□□ -1.03
MDM2-227ENST00000540709 PRPF38BQ5VTL8 546 aaKnown RBP8.63□□□□□ -1.03
MDM2-227ENST00000540709 CYP4X1Q8N118 509 aa8.63□□□□□ -1.03
MDM2-227ENST00000540709 PROCA1Q8NCQ7 364 aaPredicted RBP8.62□□□□□ -1.03
MDM2-227ENST00000540709 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
MDM2-227ENST00000540709 PRR20EP86478 221 aa8.61□□□□□ -1.03
MDM2-227ENST00000540709 PRR20CP86479 221 aa8.61□□□□□ -1.03
MDM2-227ENST00000540709 PRR20DP86480 221 aa8.61□□□□□ -1.03
MDM2-227ENST00000540709 PRR20BP86481 221 aa8.61□□□□□ -1.03
MDM2-227ENST00000540709 PRR20AP86496 221 aa8.61□□□□□ -1.03
MDM2-227ENST00000540709 LINC01559Q495D7 138 aa8.61□□□□□ -1.03
MDM2-227ENST00000540709 RTL5Q5HYW3 569 aaPredicted RBP8.61□□□□□ -1.03
MDM2-227ENST00000540709 EVA1BQ9NVM1 165 aa8.61□□□□□ -1.03
MDM2-227ENST00000540709 PLEKHG3A1L390 1219 aa8.6□□□□□ -1.03
MDM2-227ENST00000540709 LILRB3O75022 631 aa8.6□□□□□ -1.03
MDM2-227ENST00000540709 KCNH2Q12809 1159 aa8.6□□□□□ -1.03
MDM2-227ENST00000540709 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
MDM2-227ENST00000540709 RC3H1Q5TC82 1133 aaKnown RBP8.6□□□□□ -1.03
MDM2-227ENST00000540709 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
MDM2-227ENST00000540709 SKOR1P84550 965 aa8.59□□□□□ -1.03
MDM2-227ENST00000540709 LYPD8Q6UX82 237 aa8.59□□□□□ -1.03
MDM2-227ENST00000540709 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
MDM2-227ENST00000540709 MRGPRX2Q96LB1 330 aa8.59□□□□□ -1.03
MDM2-227ENST00000540709 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
MDM2-227ENST00000540709 WNT7AO00755 349 aa8.58□□□□□ -1.04
MDM2-227ENST00000540709 PER1O15534 1290 aaPredicted RBP8.58□□□□□ -1.04
MDM2-227ENST00000540709 PRKCSHP14314 528 aaPredicted RBP8.58□□□□□ -1.04
MDM2-227ENST00000540709 BAP1Q92560 729 aa8.58□□□□□ -1.04
MDM2-227ENST00000540709 MAP10Q9P2G4 905 aa8.58□□□□□ -1.04
MDM2-227ENST00000540709 WNT7BP56706 349 aa8.57□□□□□ -1.04
MDM2-227ENST00000540709 TUSC1Q2TAM9 212 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms