RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GSE1Q14687 1217 aa15.88■□□□□ 0.13
NPC1-202ENST00000540608 GGT6Q6P531 493 aa15.88■□□□□ 0.13
NPC1-202ENST00000540608 CFAP65Q6ZU64 1925 aaKnown RBP15.88■□□□□ 0.13
NPC1-202ENST00000540608 GLI2P10070 1586 aa15.88■□□□□ 0.13
NPC1-202ENST00000540608 IL27Q8NEV9 243 aa15.86■□□□□ 0.13
NPC1-202ENST00000540608 MLH3Q9UHC1 1453 aa15.86■□□□□ 0.13
NPC1-202ENST00000540608 CLUAP1Q96AJ1 413 aa15.86■□□□□ 0.13
NPC1-202ENST00000540608 TRAK1Q9UPV9 953 aa15.86■□□□□ 0.13
NPC1-202ENST00000540608 SETBP1Q9Y6X0 1596 aa15.86■□□□□ 0.13
NPC1-202ENST00000540608 PPLO60437 1756 aa15.85■□□□□ 0.13
NPC1-202ENST00000540608 HECW2Q9P2P5 1572 aa15.84■□□□□ 0.13
NPC1-202ENST00000540608 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
NPC1-202ENST00000540608 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
NPC1-202ENST00000540608 CFAP74Q9C0B2 1584 aa15.84■□□□□ 0.13
NPC1-202ENST00000540608 RUNDC1Q96C34 613 aa15.84■□□□□ 0.13
NPC1-202ENST00000540608 C14orf93Q9H972 538 aaKnown RBP15.84■□□□□ 0.13
NPC1-202ENST00000540608 CANXP27824 592 aaKnown RBP15.83■□□□□ 0.13
NPC1-202ENST00000540608 PANK1Q8TE04 598 aa15.83■□□□□ 0.13
NPC1-202ENST00000540608 ADGRB1O14514 1584 aa15.83■□□□□ 0.12
NPC1-202ENST00000540608 SHPRHQ149N8 1683 aa15.83■□□□□ 0.12
NPC1-202ENST00000540608 AAMPQ13685 434 aa15.83■□□□□ 0.12
NPC1-202ENST00000540608 TMEM132EQ6IEE7 984 aa15.83■□□□□ 0.12
NPC1-202ENST00000540608 COG6Q9Y2V7 657 aa15.83■□□□□ 0.12
NPC1-202ENST00000540608 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.12
NPC1-202ENST00000540608 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
NPC1-202ENST00000540608 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
NPC1-202ENST00000540608 USP19O94966 1318 aa15.82■□□□□ 0.12
NPC1-202ENST00000540608 ZC3H13Q5T200 1668 aaKnown RBP15.82■□□□□ 0.12
NPC1-202ENST00000540608 ABCC3O15438 1527 aa15.82■□□□□ 0.12
NPC1-202ENST00000540608 WDR63Q8IWG1 891 aa15.81■□□□□ 0.12
NPC1-202ENST00000540608 QRICH2Q9H0J4 1663 aa15.81■□□□□ 0.12
NPC1-202ENST00000540608 RARSP54136 660 aaKnown RBP15.81■□□□□ 0.12
NPC1-202ENST00000540608 SLC12A5Q9H2X9 1139 aa15.81■□□□□ 0.12
NPC1-202ENST00000540608 DIP2BQ9P265 1576 aa15.8■□□□□ 0.12
NPC1-202ENST00000540608 TCP11L2Q8N4U5 519 aa15.8■□□□□ 0.12
NPC1-202ENST00000540608 IQSEC2Q5JU85 1478 aa15.8■□□□□ 0.12
NPC1-202ENST00000540608 RAPGEF3O95398 923 aa15.79■□□□□ 0.12
NPC1-202ENST00000540608 PMFBP1Q8TBY8 1022 aa15.79■□□□□ 0.12
NPC1-202ENST00000540608 FRAT1Q92837 279 aaPredicted RBP15.79■□□□□ 0.12
NPC1-202ENST00000540608 SIGLEC1Q9BZZ2 1709 aa15.79■□□□□ 0.12
NPC1-202ENST00000540608 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
NPC1-202ENST00000540608 NEUROD2Q15784 382 aa15.78■□□□□ 0.12
NPC1-202ENST00000540608 NUTM2DQ5VT03 806 aaPredicted RBP15.78■□□□□ 0.12
NPC1-202ENST00000540608 CAMSAP1Q5T5Y3 1602 aa15.78■□□□□ 0.12
NPC1-202ENST00000540608 FRAT2O75474 233 aaPredicted RBP15.78■□□□□ 0.12
NPC1-202ENST00000540608 NCBP3Q53F19 620 aaKnown RBP15.78■□□□□ 0.12
NPC1-202ENST00000540608 RRP7AQ9Y3A4 280 aaKnown RBP15.78■□□□□ 0.12
NPC1-202ENST00000540608 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.12
NPC1-202ENST00000540608 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
NPC1-202ENST00000540608 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
NPC1-202ENST00000540608 USP32Q8NFA0 1604 aa15.77■□□□□ 0.12
NPC1-202ENST00000540608 SEC24BO95487 1268 aa15.76■□□□□ 0.11
NPC1-202ENST00000540608 MTHFSP49914 203 aa15.76■□□□□ 0.11
NPC1-202ENST00000540608 CFAP53Q96M91 514 aa15.76■□□□□ 0.11
NPC1-202ENST00000540608 ZMYM3Q14202 1370 aa15.76■□□□□ 0.11
NPC1-202ENST00000540608 PUS7Q96PZ0 661 aaKnown RBP15.75■□□□□ 0.11
NPC1-202ENST00000540608 PCDHB15Q9Y5E8 787 aa15.75■□□□□ 0.11
NPC1-202ENST00000540608 PIK3C2BO00750 1634 aa15.74■□□□□ 0.11
NPC1-202ENST00000540608 BECN1Q14457 450 aa15.74■□□□□ 0.11
NPC1-202ENST00000540608 NEO1Q92859 1461 aa15.74■□□□□ 0.11
NPC1-202ENST00000540608 RLBP1P12271 317 aa15.74■□□□□ 0.11
NPC1-202ENST00000540608 DIP2CQ9Y2E4 1556 aa15.73■□□□□ 0.11
NPC1-202ENST00000540608 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
NPC1-202ENST00000540608 NEXMIFQ5QGS0 1516 aa15.73■□□□□ 0.11
NPC1-202ENST00000540608 MYH16Q9H6N6 1097 aa15.73■□□□□ 0.11
NPC1-202ENST00000540608 BRPF3Q9ULD4 1205 aa15.73■□□□□ 0.11
NPC1-202ENST00000540608 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
NPC1-202ENST00000540608 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
NPC1-202ENST00000540608 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
NPC1-202ENST00000540608 ARHGEF28Q8N1W1 1705 aaKnown RBP15.71■□□□□ 0.11
NPC1-202ENST00000540608 NSD2O96028 1365 aa15.71■□□□□ 0.11
NPC1-202ENST00000540608 TULP4Q9NRJ4 1543 aa15.71■□□□□ 0.11
NPC1-202ENST00000540608 KIF13AQ9H1H9 1805 aa15.71■□□□□ 0.11
NPC1-202ENST00000540608 VGFO15240 615 aaPredicted RBP15.71■□□□□ 0.11
NPC1-202ENST00000540608 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
NPC1-202ENST00000540608 EVC2Q86UK5 1308 aa15.7■□□□□ 0.1
NPC1-202ENST00000540608 ANKRD36BQ8N2N9 1353 aa15.7■□□□□ 0.1
NPC1-202ENST00000540608 IDI1Q13907 227 aa15.7■□□□□ 0.1
NPC1-202ENST00000540608 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
NPC1-202ENST00000540608 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
NPC1-202ENST00000540608 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
NPC1-202ENST00000540608 CT47B1P0C2W7 299 aaPredicted RBP15.68■□□□□ 0.1
NPC1-202ENST00000540608 U2AF1L5P0DN76 240 aaPredicted RBP15.68■□□□□ 0.1
NPC1-202ENST00000540608 U2AF1Q01081 240 aaKnown RBP eCLIP15.68■□□□□ 0.1
NPC1-202ENST00000540608 SAFB2Q14151 953 aaKnown RBP eCLIP15.68■□□□□ 0.1
NPC1-202ENST00000540608 MVPQ14764 893 aaKnown RBP15.68■□□□□ 0.1
NPC1-202ENST00000540608 FAM69CQ0P6D2 419 aa15.68■□□□□ 0.1
NPC1-202ENST00000540608 TBC1D32Q96NH3 1257 aa15.68■□□□□ 0.1
NPC1-202ENST00000540608 CABP2Q9NPB3 220 aa15.68■□□□□ 0.1
NPC1-202ENST00000540608 RICTORQ6R327 1708 aa15.68■□□□□ 0.1
NPC1-202ENST00000540608 ARHGAP31Q2M1Z3 1444 aa15.68■□□□□ 0.1
NPC1-202ENST00000540608 YEATS2Q9ULM3 1422 aa15.68■□□□□ 0.1
NPC1-202ENST00000540608 ZKSCAN2Q63HK3 967 aa15.67■□□□□ 0.1
NPC1-202ENST00000540608 ADGRB2O60241 1585 aa15.66■□□□□ 0.1
NPC1-202ENST00000540608 ANTXR1Q9H6X2 564 aa15.65■□□□□ 0.1
NPC1-202ENST00000540608 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
NPC1-202ENST00000540608 STK26Q9P289 416 aa15.65■□□□□ 0.1
NPC1-202ENST00000540608 MYO5BQ9ULV0 1848 aa15.64■□□□□ 0.09
NPC1-202ENST00000540608 ANO8Q9HCE9 1232 aaPredicted RBP15.64■□□□□ 0.09
NPC1-202ENST00000540608 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 544.2 ms