RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
PHC1-208ENST00000540574 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
PHC1-208ENST00000540574 ANKRD45Q5TZF3 282 aa12.52□□□□□ -0.41
PHC1-208ENST00000540574 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
PHC1-208ENST00000540574 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.41
PHC1-208ENST00000540574 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
PHC1-208ENST00000540574 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
PHC1-208ENST00000540574 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
PHC1-208ENST00000540574 ASXL2Q76L83 1435 aa12.5□□□□□ -0.41
PHC1-208ENST00000540574 RNF123Q5XPI4 1314 aa12.5□□□□□ -0.41
PHC1-208ENST00000540574 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
PHC1-208ENST00000540574 IL27Q8NEV9 243 aa12.5□□□□□ -0.41
PHC1-208ENST00000540574 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
PHC1-208ENST00000540574 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
PHC1-208ENST00000540574 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
PHC1-208ENST00000540574 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
PHC1-208ENST00000540574 UGGT1Q9NYU2 1555 aa12.49□□□□□ -0.41
PHC1-208ENST00000540574 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
PHC1-208ENST00000540574 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
PHC1-208ENST00000540574 PNNQ9H307 717 aaKnown RBP12.49□□□□□ -0.41
PHC1-208ENST00000540574 RLBP1P12271 317 aa12.49□□□□□ -0.41
PHC1-208ENST00000540574 COG3Q96JB2 828 aa12.48□□□□□ -0.41
PHC1-208ENST00000540574 C14orf93Q9H972 538 aaKnown RBP12.48□□□□□ -0.41
PHC1-208ENST00000540574 ABCC2Q92887 1545 aa12.48□□□□□ -0.41
PHC1-208ENST00000540574 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
PHC1-208ENST00000540574 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
PHC1-208ENST00000540574 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
PHC1-208ENST00000540574 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
PHC1-208ENST00000540574 SSH1Q8WYL5 1049 aa12.47□□□□□ -0.41
PHC1-208ENST00000540574 SLC26A8Q96RN1 970 aa12.47□□□□□ -0.41
PHC1-208ENST00000540574 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
PHC1-208ENST00000540574 PDE3AQ14432 1141 aa12.46□□□□□ -0.41
PHC1-208ENST00000540574 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
PHC1-208ENST00000540574 ZNF428Q96B54 188 aa12.46□□□□□ -0.41
PHC1-208ENST00000540574 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
PHC1-208ENST00000540574 NKTRP30414 1462 aaKnown RBP12.45□□□□□ -0.42
PHC1-208ENST00000540574 SEC24BO95487 1268 aa12.45□□□□□ -0.42
PHC1-208ENST00000540574 GSE1Q14687 1217 aa12.45□□□□□ -0.42
PHC1-208ENST00000540574 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
PHC1-208ENST00000540574 NME9Q86XW9 330 aa12.45□□□□□ -0.42
PHC1-208ENST00000540574 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
PHC1-208ENST00000540574 GPRASP1Q5JY77 1395 aa12.45□□□□□ -0.42
PHC1-208ENST00000540574 NOL8Q76FK4 1167 aaKnown RBP12.44□□□□□ -0.42
PHC1-208ENST00000540574 ASXL1Q8IXJ9 1541 aa12.44□□□□□ -0.42
PHC1-208ENST00000540574 TMEM57Q8N5G2 664 aa12.44□□□□□ -0.42
PHC1-208ENST00000540574 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
PHC1-208ENST00000540574 WDR7Q9Y4E6 1490 aa12.43□□□□□ -0.42
PHC1-208ENST00000540574 AMPHP49418 695 aa12.43□□□□□ -0.42
PHC1-208ENST00000540574 RBM33Q96EV2 1170 aaKnown RBP12.43□□□□□ -0.42
PHC1-208ENST00000540574 MIS18AQ9NYP9 233 aa12.43□□□□□ -0.42
PHC1-208ENST00000540574 KDM5DQ9BY66 1539 aa12.43□□□□□ -0.42
PHC1-208ENST00000540574 FAM83GA6ND36 823 aa12.42□□□□□ -0.42
PHC1-208ENST00000540574 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
PHC1-208ENST00000540574 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
PHC1-208ENST00000540574 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
PHC1-208ENST00000540574 CHD1O14646 1710 aa12.42□□□□□ -0.42
PHC1-208ENST00000540574 MVPQ14764 893 aaKnown RBP12.42□□□□□ -0.42
PHC1-208ENST00000540574 FYB1O15117 783 aa12.42□□□□□ -0.42
PHC1-208ENST00000540574 C8orf34Q49A92 452 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 ATP10AO60312 1499 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 SULT6B1Q6IMI4 303 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 ATF7IPQ6VMQ6 1270 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 TRIM27P14373 513 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 CEBPAP49715 358 aaPredicted RBP12.41□□□□□ -0.42
PHC1-208ENST00000540574 ARHGEF5Q12774 1597 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 MAST1Q9Y2H9 1570 aa12.41□□□□□ -0.42
PHC1-208ENST00000540574 HDGFP51858 240 aaKnown RBP12.4□□□□□ -0.42
PHC1-208ENST00000540574 C22orf23Q9BZE7 217 aa12.4□□□□□ -0.42
PHC1-208ENST00000540574 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.42
PHC1-208ENST00000540574 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
PHC1-208ENST00000540574 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
PHC1-208ENST00000540574 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
PHC1-208ENST00000540574 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
PHC1-208ENST00000540574 TWISTNBQ3B726 338 aaPredicted RBP12.38□□□□□ -0.43
PHC1-208ENST00000540574 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
PHC1-208ENST00000540574 MYO5CQ9NQX4 1742 aa12.38□□□□□ -0.43
PHC1-208ENST00000540574 MCM10Q7L590 875 aa12.37□□□□□ -0.43
PHC1-208ENST00000540574 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
PHC1-208ENST00000540574 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
PHC1-208ENST00000540574 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
PHC1-208ENST00000540574 A0A0G2JS52 829 aa12.37□□□□□ -0.43
PHC1-208ENST00000540574 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
PHC1-208ENST00000540574 NUDT16Q96DE0 195 aaKnown RBP12.36□□□□□ -0.43
PHC1-208ENST00000540574 PHACTR3Q96KR7 559 aa12.36□□□□□ -0.43
PHC1-208ENST00000540574 KIF16BQ96L93 1317 aa12.36□□□□□ -0.43
PHC1-208ENST00000540574 RTEL1-TNFRSF6BF6WH68 1400 aa12.36□□□□□ -0.43
PHC1-208ENST00000540574 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
PHC1-208ENST00000540574 EID1Q9Y6B2 187 aa12.36□□□□□ -0.43
PHC1-208ENST00000540574 BLMP54132 1417 aaPredicted RBP12.35□□□□□ -0.43
PHC1-208ENST00000540574 OS9Q13438 667 aaPredicted RBP12.35□□□□□ -0.43
PHC1-208ENST00000540574 GNAI1P63096 354 aa12.35□□□□□ -0.43
PHC1-208ENST00000540574 KRT24Q2M2I5 525 aa12.35□□□□□ -0.43
PHC1-208ENST00000540574 CROCC2H7BZ55 1655 aa12.35□□□□□ -0.43
PHC1-208ENST00000540574 ADCY10Q96PN6 1610 aa12.35□□□□□ -0.43
PHC1-208ENST00000540574 EIF2AK4Q9P2K8 1649 aaKnown RBP12.35□□□□□ -0.43
PHC1-208ENST00000540574 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
PHC1-208ENST00000540574 A0A1W2PP64 1363 aa12.34□□□□□ -0.43
PHC1-208ENST00000540574 TSPYL6Q8N831 410 aa12.34□□□□□ -0.43
PHC1-208ENST00000540574 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms