RNA–Protein interactions for RNA: ENST00000540565.1

HIST4H4-205, Transcript of histone cluster 4 H4, humanhuman

TSL 3

Gene HIST4H4, Length 577 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-205ENST00000540565 TECPR2O15040 1411 aa18.57■□□□□ 0.56
HIST4H4-205ENST00000540565 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
HIST4H4-205ENST00000540565 WAPLQ7Z5K2 1190 aa18.57■□□□□ 0.56
HIST4H4-205ENST00000540565 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
HIST4H4-205ENST00000540565 ABCC11Q96J66 1382 aa18.56■□□□□ 0.56
HIST4H4-205ENST00000540565 ESCO1Q5FWF5 840 aa18.56■□□□□ 0.56
HIST4H4-205ENST00000540565 IFT172Q9UG01 1749 aa18.56■□□□□ 0.56
HIST4H4-205ENST00000540565 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
HIST4H4-205ENST00000540565 ADAMTS2O95450 1211 aa18.55■□□□□ 0.56
HIST4H4-205ENST00000540565 NGLY1Q96IV0 654 aa18.54■□□□□ 0.56
HIST4H4-205ENST00000540565 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
HIST4H4-205ENST00000540565 CDK12Q9NYV4 1490 aaPredicted RBP18.53■□□□□ 0.56
HIST4H4-205ENST00000540565 UPF1Q92900 1129 aaKnown RBP eCLIP18.53■□□□□ 0.56
HIST4H4-205ENST00000540565 QTRT2Q9H974 415 aaKnown RBP18.53■□□□□ 0.56
HIST4H4-205ENST00000540565 NPHP3Q7Z494 1330 aa18.52■□□□□ 0.56
HIST4H4-205ENST00000540565 YTHDC2Q9H6S0 1430 aaKnown RBP18.52■□□□□ 0.56
HIST4H4-205ENST00000540565 C14orf93Q9H972 538 aaKnown RBP18.52■□□□□ 0.56
HIST4H4-205ENST00000540565 NUTM2FA1L443 756 aa18.51■□□□□ 0.55
HIST4H4-205ENST00000540565 FOXO3O43524 673 aa18.51■□□□□ 0.55
HIST4H4-205ENST00000540565 RBM6P78332 1123 aaKnown RBP18.51■□□□□ 0.55
HIST4H4-205ENST00000540565 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
HIST4H4-205ENST00000540565 RAB3GAP2Q9H2M9 1393 aa18.51■□□□□ 0.55
HIST4H4-205ENST00000540565 XPCQ01831 940 aaPredicted RBP18.49■□□□□ 0.55
HIST4H4-205ENST00000540565 CFAP70Q5T0N1 1121 aa18.49■□□□□ 0.55
HIST4H4-205ENST00000540565 PXDNQ92626 1479 aa18.49■□□□□ 0.55
HIST4H4-205ENST00000540565 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
HIST4H4-205ENST00000540565 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
HIST4H4-205ENST00000540565 MYOM2P54296 1465 aa18.47■□□□□ 0.55
HIST4H4-205ENST00000540565 FNBP4Q8N3X1 1017 aaPredicted RBP18.47■□□□□ 0.55
HIST4H4-205ENST00000540565 USP21Q9UK80 565 aa18.47■□□□□ 0.55
HIST4H4-205ENST00000540565 COL22A1Q8NFW1 1626 aaPredicted RBP18.46■□□□□ 0.55
HIST4H4-205ENST00000540565 RGS12O14924 1447 aa18.46■□□□□ 0.55
HIST4H4-205ENST00000540565 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
HIST4H4-205ENST00000540565 TRPC5Q9UL62 973 aaPredicted RBP18.43■□□□□ 0.54
HIST4H4-205ENST00000540565 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
HIST4H4-205ENST00000540565 PRAM1Q96QH2 718 aa18.42■□□□□ 0.54
HIST4H4-205ENST00000540565 SPATA31A3Q5VYP0 1347 aa18.41■□□□□ 0.54
HIST4H4-205ENST00000540565 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
HIST4H4-205ENST00000540565 KRT28Q7Z3Y7 464 aa18.4■□□□□ 0.54
HIST4H4-205ENST00000540565 PHF8Q9UPP1 1060 aa18.39■□□□□ 0.53
HIST4H4-205ENST00000540565 ATRNO75882 1429 aa18.39■□□□□ 0.53
HIST4H4-205ENST00000540565 BCL9LQ86UU0 1499 aa18.39■□□□□ 0.53
HIST4H4-205ENST00000540565 HRCP23327 699 aa18.38■□□□□ 0.53
HIST4H4-205ENST00000540565 POGKQ9P215 609 aa18.38■□□□□ 0.53
HIST4H4-205ENST00000540565 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
HIST4H4-205ENST00000540565 DCAF11Q8TEB1 546 aa18.37■□□□□ 0.53
HIST4H4-205ENST00000540565 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
HIST4H4-205ENST00000540565 ADGRB1O14514 1584 aa18.36■□□□□ 0.53
HIST4H4-205ENST00000540565 KDM2AQ9Y2K7 1162 aa18.36■□□□□ 0.53
HIST4H4-205ENST00000540565 PSME1Q06323 249 aa18.35■□□□□ 0.53
HIST4H4-205ENST00000540565 TRAK1Q9UPV9 953 aa18.35■□□□□ 0.53
HIST4H4-205ENST00000540565 STAC3Q96MF2 364 aa18.34■□□□□ 0.53
HIST4H4-205ENST00000540565 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
HIST4H4-205ENST00000540565 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
HIST4H4-205ENST00000540565 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
HIST4H4-205ENST00000540565 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
HIST4H4-205ENST00000540565 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
HIST4H4-205ENST00000540565 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
HIST4H4-205ENST00000540565 UNC5CLQ8IV45 518 aa18.32■□□□□ 0.52
HIST4H4-205ENST00000540565 SBNO1A3KN83 1393 aa18.31■□□□□ 0.52
HIST4H4-205ENST00000540565 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
HIST4H4-205ENST00000540565 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
HIST4H4-205ENST00000540565 HIRIP3Q9BW71 556 aaPredicted RBP18.31■□□□□ 0.52
HIST4H4-205ENST00000540565 SLIT2O94813 1529 aa18.3■□□□□ 0.52
HIST4H4-205ENST00000540565 ADGRB2O60241 1585 aa18.3■□□□□ 0.52
HIST4H4-205ENST00000540565 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
HIST4H4-205ENST00000540565 HAP1P54257 671 aaPredicted RBP18.29■□□□□ 0.52
HIST4H4-205ENST00000540565 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
HIST4H4-205ENST00000540565 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
HIST4H4-205ENST00000540565 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
HIST4H4-205ENST00000540565 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.52
HIST4H4-205ENST00000540565 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.52
HIST4H4-205ENST00000540565 PLEKHG5O94827 1062 aa18.27■□□□□ 0.52
HIST4H4-205ENST00000540565 EIF3AQ14152 1382 aaKnown RBP18.26■□□□□ 0.51
HIST4H4-205ENST00000540565 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.26■□□□□ 0.51
HIST4H4-205ENST00000540565 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
HIST4H4-205ENST00000540565 GLI3P10071 1580 aa18.23■□□□□ 0.51
HIST4H4-205ENST00000540565 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
HIST4H4-205ENST00000540565 VPS72Q15906 364 aa18.23■□□□□ 0.51
HIST4H4-205ENST00000540565 TULP4Q9NRJ4 1543 aa18.23■□□□□ 0.51
HIST4H4-205ENST00000540565 FAM83GA6ND36 823 aa18.22■□□□□ 0.51
HIST4H4-205ENST00000540565 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
HIST4H4-205ENST00000540565 NGDNQ8NEJ9 315 aaKnown RBP18.2■□□□□ 0.5
HIST4H4-205ENST00000540565 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
HIST4H4-205ENST00000540565 ONECUT3O60422 494 aaPredicted RBP18.19■□□□□ 0.5
HIST4H4-205ENST00000540565 ABCA3Q99758 1704 aa18.19■□□□□ 0.5
HIST4H4-205ENST00000540565 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
HIST4H4-205ENST00000540565 NUDT16Q96DE0 195 aaKnown RBP18.18■□□□□ 0.5
HIST4H4-205ENST00000540565 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
HIST4H4-205ENST00000540565 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
HIST4H4-205ENST00000540565 PLCH1Q4KWH8 1693 aa18.17■□□□□ 0.5
HIST4H4-205ENST00000540565 NWD2Q9ULI1 1742 aa18.17■□□□□ 0.5
HIST4H4-205ENST00000540565 ALS2Q96Q42 1657 aa18.16■□□□□ 0.5
HIST4H4-205ENST00000540565 ATP7BP35670 1465 aa18.16■□□□□ 0.5
HIST4H4-205ENST00000540565 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
HIST4H4-205ENST00000540565 CDK19Q9BWU1 502 aa18.16■□□□□ 0.5
HIST4H4-205ENST00000540565 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
HIST4H4-205ENST00000540565 BTG4Q9NY30 223 aa18.15■□□□□ 0.5
HIST4H4-205ENST00000540565 EP400Q96L91 3159 aa18.14■□□□□ 0.49
HIST4H4-205ENST00000540565 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms