RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 NALCNQ8IZF0 1738 aa17.03■□□□□ 0.32
TMEM258-205ENST00000540434 SOS2Q07890 1332 aaPredicted RBP17.02■□□□□ 0.32
TMEM258-205ENST00000540434 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.32
TMEM258-205ENST00000540434 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
TMEM258-205ENST00000540434 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
TMEM258-205ENST00000540434 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
TMEM258-205ENST00000540434 METP08581 1390 aa17.01■□□□□ 0.31
TMEM258-205ENST00000540434 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
TMEM258-205ENST00000540434 GLI3P10071 1580 aa16.99■□□□□ 0.31
TMEM258-205ENST00000540434 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
TMEM258-205ENST00000540434 CLTCL1P53675 1640 aa16.99■□□□□ 0.31
TMEM258-205ENST00000540434 YY1P25490 414 aa16.98■□□□□ 0.31
TMEM258-205ENST00000540434 MYOM2P54296 1465 aa16.97■□□□□ 0.31
TMEM258-205ENST00000540434 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
TMEM258-205ENST00000540434 COL22A1Q8NFW1 1626 aaPredicted RBP16.96■□□□□ 0.31
TMEM258-205ENST00000540434 MARF1Q9Y4F3 1742 aaKnown RBP16.95■□□□□ 0.3
TMEM258-205ENST00000540434 XPCQ01831 940 aaPredicted RBP16.94■□□□□ 0.3
TMEM258-205ENST00000540434 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
TMEM258-205ENST00000540434 R3HDM1Q15032 1099 aaKnown RBP16.92■□□□□ 0.3
TMEM258-205ENST00000540434 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
TMEM258-205ENST00000540434 EN1Q05925 392 aaPredicted RBP16.89■□□□□ 0.29
TMEM258-205ENST00000540434 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
TMEM258-205ENST00000540434 SLIT2O94813 1529 aa16.87■□□□□ 0.29
TMEM258-205ENST00000540434 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
TMEM258-205ENST00000540434 BAG6P46379 1132 aa16.87■□□□□ 0.29
TMEM258-205ENST00000540434 KRT27Q7Z3Y8 459 aa16.87■□□□□ 0.29
TMEM258-205ENST00000540434 KIF1BO60333 1816 aa16.86■□□□□ 0.29
TMEM258-205ENST00000540434 ZNF326Q5BKZ1 582 aaKnown RBP16.86■□□□□ 0.29
TMEM258-205ENST00000540434 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
TMEM258-205ENST00000540434 TRIM26Q12899 539 aaPredicted RBP16.85■□□□□ 0.29
TMEM258-205ENST00000540434 PXDNQ92626 1479 aa16.85■□□□□ 0.29
TMEM258-205ENST00000540434 FOXO3O43524 673 aa16.84■□□□□ 0.29
TMEM258-205ENST00000540434 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
TMEM258-205ENST00000540434 ESCO1Q5FWF5 840 aa16.84■□□□□ 0.29
TMEM258-205ENST00000540434 FAM182BQ5T319 152 aa16.84■□□□□ 0.29
TMEM258-205ENST00000540434 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
TMEM258-205ENST00000540434 SPATA31E1Q6ZUB1 1445 aa16.83■□□□□ 0.28
TMEM258-205ENST00000540434 CCDC9Q9Y3X0 531 aaKnown RBP16.83■□□□□ 0.28
TMEM258-205ENST00000540434 PRAG1Q86YV5 1406 aa16.82■□□□□ 0.28
TMEM258-205ENST00000540434 RGL3Q3MIN7 710 aa16.82■□□□□ 0.28
TMEM258-205ENST00000540434 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
TMEM258-205ENST00000540434 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
TMEM258-205ENST00000540434 CCDC144AA2RUR9 1427 aa16.8■□□□□ 0.28
TMEM258-205ENST00000540434 ACIN1Q9UKV3 1341 aaKnown RBP16.8■□□□□ 0.28
TMEM258-205ENST00000540434 A0A0G2JS52 829 aa16.8■□□□□ 0.28
TMEM258-205ENST00000540434 MYT1Q01538 1121 aa16.8■□□□□ 0.28
TMEM258-205ENST00000540434 VPS72Q15906 364 aa16.8■□□□□ 0.28
TMEM258-205ENST00000540434 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
TMEM258-205ENST00000540434 ONECUT3O60422 494 aaPredicted RBP16.79■□□□□ 0.28
TMEM258-205ENST00000540434 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
TMEM258-205ENST00000540434 PPLO60437 1756 aa16.78■□□□□ 0.28
TMEM258-205ENST00000540434 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
TMEM258-205ENST00000540434 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
TMEM258-205ENST00000540434 USP32Q8NFA0 1604 aa16.76■□□□□ 0.27
TMEM258-205ENST00000540434 FAM98CQ17RN3 349 aaKnown RBP16.75■□□□□ 0.27
TMEM258-205ENST00000540434 CDC42BPGQ6DT37 1551 aa16.75■□□□□ 0.27
TMEM258-205ENST00000540434 IFT172Q9UG01 1749 aa16.75■□□□□ 0.27
TMEM258-205ENST00000540434 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
TMEM258-205ENST00000540434 PLCH1Q4KWH8 1693 aa16.74■□□□□ 0.27
TMEM258-205ENST00000540434 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
TMEM258-205ENST00000540434 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
TMEM258-205ENST00000540434 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
TMEM258-205ENST00000540434 RGPD1P0DJD0 1748 aa16.72■□□□□ 0.27
TMEM258-205ENST00000540434 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
TMEM258-205ENST00000540434 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
TMEM258-205ENST00000540434 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
TMEM258-205ENST00000540434 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
TMEM258-205ENST00000540434 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
TMEM258-205ENST00000540434 NWD2Q9ULI1 1742 aa16.7■□□□□ 0.26
TMEM258-205ENST00000540434 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
TMEM258-205ENST00000540434 CAMKK2Q96RR4 588 aa16.69■□□□□ 0.26
TMEM258-205ENST00000540434 FAM83GA6ND36 823 aa16.68■□□□□ 0.26
TMEM258-205ENST00000540434 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
TMEM258-205ENST00000540434 RGPD8O14715 1765 aaPredicted RBP16.67■□□□□ 0.26
TMEM258-205ENST00000540434 ZNF784Q8NCA9 323 aaPredicted RBP16.67■□□□□ 0.26
TMEM258-205ENST00000540434 PCGF6Q9BYE7 350 aa16.67■□□□□ 0.26
TMEM258-205ENST00000540434 DISP2A7MBM2 1401 aa16.66■□□□□ 0.26
TMEM258-205ENST00000540434 TRIM37O94972 964 aa16.66■□□□□ 0.26
TMEM258-205ENST00000540434 PPP1R1BQ9UD71 204 aaPredicted RBP16.66■□□□□ 0.26
TMEM258-205ENST00000540434 FMN2Q9NZ56 1722 aa16.65■□□□□ 0.26
TMEM258-205ENST00000540434 TMEM132EQ6IEE7 984 aa16.65■□□□□ 0.26
TMEM258-205ENST00000540434 WAPLQ7Z5K2 1190 aa16.65■□□□□ 0.26
TMEM258-205ENST00000540434 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
TMEM258-205ENST00000540434 ABCA3Q99758 1704 aa16.65■□□□□ 0.26
TMEM258-205ENST00000540434 PIK3C2GO75747 1445 aa16.64■□□□□ 0.25
TMEM258-205ENST00000540434 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
TMEM258-205ENST00000540434 DCAF11Q8TEB1 546 aa16.64■□□□□ 0.25
TMEM258-205ENST00000540434 NRXN1Q9ULB1 1477 aa16.64■□□□□ 0.25
TMEM258-205ENST00000540434 KIF1AQ12756 1690 aa16.64■□□□□ 0.25
TMEM258-205ENST00000540434 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
TMEM258-205ENST00000540434 TECPR2O15040 1411 aa16.62■□□□□ 0.25
TMEM258-205ENST00000540434 NRAPQ86VF7 1730 aa16.62■□□□□ 0.25
TMEM258-205ENST00000540434 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
TMEM258-205ENST00000540434 APBA3O96018 575 aa16.62■□□□□ 0.25
TMEM258-205ENST00000540434 BTG4Q9NY30 223 aa16.62■□□□□ 0.25
TMEM258-205ENST00000540434 UTRNP46939 3433 aa16.62■□□□□ 0.25
TMEM258-205ENST00000540434 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
TMEM258-205ENST00000540434 STK26Q9P289 416 aa16.61■□□□□ 0.25
TMEM258-205ENST00000540434 PLEKHH1Q9ULM0 1364 aa16.61■□□□□ 0.25
TMEM258-205ENST00000540434 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms