RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ITGAEP38570 1179 aa12.35□□□□□ -0.43
LRP6-204ENST00000540415 RALGAPBQ86X10 1494 aa12.34□□□□□ -0.43
LRP6-204ENST00000540415 PXDNQ92626 1479 aa12.34□□□□□ -0.43
LRP6-204ENST00000540415 ESCO1Q5FWF5 840 aa12.34□□□□□ -0.43
LRP6-204ENST00000540415 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
LRP6-204ENST00000540415 GLI3P10071 1580 aa12.34□□□□□ -0.43
LRP6-204ENST00000540415 CLTCL1P53675 1640 aa12.33□□□□□ -0.43
LRP6-204ENST00000540415 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
LRP6-204ENST00000540415 FOXO3O43524 673 aa12.33□□□□□ -0.44
LRP6-204ENST00000540415 NUTM2FA1L443 756 aa12.32□□□□□ -0.44
LRP6-204ENST00000540415 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
LRP6-204ENST00000540415 NPHP3Q7Z494 1330 aa12.32□□□□□ -0.44
LRP6-204ENST00000540415 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
LRP6-204ENST00000540415 SEPT12Q8IYM1 358 aa12.31□□□□□ -0.44
LRP6-204ENST00000540415 SLIT2O94813 1529 aa12.31□□□□□ -0.44
LRP6-204ENST00000540415 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
LRP6-204ENST00000540415 HFM1A2PYH4 1435 aa12.28□□□□□ -0.44
LRP6-204ENST00000540415 PRAG1Q86YV5 1406 aa12.28□□□□□ -0.44
LRP6-204ENST00000540415 LRP5O75197 1615 aa12.27□□□□□ -0.44
LRP6-204ENST00000540415 HRCP23327 699 aa12.27□□□□□ -0.45
LRP6-204ENST00000540415 WAPLQ7Z5K2 1190 aa12.27□□□□□ -0.45
LRP6-204ENST00000540415 CABLES1Q8TDN4 633 aa12.27□□□□□ -0.45
LRP6-204ENST00000540415 NAIPQ13075 1403 aa12.27□□□□□ -0.45
LRP6-204ENST00000540415 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
LRP6-204ENST00000540415 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
LRP6-204ENST00000540415 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
LRP6-204ENST00000540415 SPATA31A3Q5VYP0 1347 aa12.26□□□□□ -0.45
LRP6-204ENST00000540415 PLEKHH1Q9ULM0 1364 aa12.26□□□□□ -0.45
LRP6-204ENST00000540415 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
LRP6-204ENST00000540415 STK26Q9P289 416 aa12.25□□□□□ -0.45
LRP6-204ENST00000540415 BRWD3Q6RI45 1802 aa12.25□□□□□ -0.45
LRP6-204ENST00000540415 VPS72Q15906 364 aa12.24□□□□□ -0.45
LRP6-204ENST00000540415 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
LRP6-204ENST00000540415 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
LRP6-204ENST00000540415 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.24□□□□□ -0.45
LRP6-204ENST00000540415 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
LRP6-204ENST00000540415 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
LRP6-204ENST00000540415 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
LRP6-204ENST00000540415 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
LRP6-204ENST00000540415 ADGRF5Q8IZF2 1346 aa12.22□□□□□ -0.45
LRP6-204ENST00000540415 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
LRP6-204ENST00000540415 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
LRP6-204ENST00000540415 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
LRP6-204ENST00000540415 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
LRP6-204ENST00000540415 TMEM132EQ6IEE7 984 aa12.21□□□□□ -0.45
LRP6-204ENST00000540415 A0A0G2JS52 829 aa12.2□□□□□ -0.46
LRP6-204ENST00000540415 BAG6P46379 1132 aa12.2□□□□□ -0.46
LRP6-204ENST00000540415 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
LRP6-204ENST00000540415 MYT1Q01538 1121 aa12.2□□□□□ -0.46
LRP6-204ENST00000540415 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
LRP6-204ENST00000540415 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
LRP6-204ENST00000540415 RPGRIP1LQ68CZ1 1315 aa12.19□□□□□ -0.46
LRP6-204ENST00000540415 FAM83GA6ND36 823 aa12.19□□□□□ -0.46
LRP6-204ENST00000540415 CCDC144AA2RUR9 1427 aa12.19□□□□□ -0.46
LRP6-204ENST00000540415 KIF1BO60333 1816 aa12.18□□□□□ -0.46
LRP6-204ENST00000540415 LMOD2Q6P5Q4 547 aa12.18□□□□□ -0.46
LRP6-204ENST00000540415 TECPR2O15040 1411 aa12.18□□□□□ -0.46
LRP6-204ENST00000540415 PLCH1Q4KWH8 1693 aa12.17□□□□□ -0.46
LRP6-204ENST00000540415 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
LRP6-204ENST00000540415 PPLO60437 1756 aa12.15□□□□□ -0.46
LRP6-204ENST00000540415 FMN2Q9NZ56 1722 aa12.15□□□□□ -0.46
LRP6-204ENST00000540415 RRBP1Q9P2E9 1410 aaKnown RBP12.15□□□□□ -0.46
LRP6-204ENST00000540415 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
LRP6-204ENST00000540415 RGL3Q3MIN7 710 aa12.15□□□□□ -0.46
LRP6-204ENST00000540415 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
LRP6-204ENST00000540415 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
LRP6-204ENST00000540415 KIF1AQ12756 1690 aa12.13□□□□□ -0.47
LRP6-204ENST00000540415 PSME1Q06323 249 aa12.13□□□□□ -0.47
LRP6-204ENST00000540415 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
LRP6-204ENST00000540415 PMFBP1Q8TBY8 1022 aa12.13□□□□□ -0.47
LRP6-204ENST00000540415 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
LRP6-204ENST00000540415 SBNO1A3KN83 1393 aa12.13□□□□□ -0.47
LRP6-204ENST00000540415 YTHDC2Q9H6S0 1430 aaKnown RBP12.12□□□□□ -0.47
LRP6-204ENST00000540415 ABCA3Q99758 1704 aa12.12□□□□□ -0.47
LRP6-204ENST00000540415 NWD2Q9ULI1 1742 aa12.12□□□□□ -0.47
LRP6-204ENST00000540415 YY1P25490 414 aa12.12□□□□□ -0.47
LRP6-204ENST00000540415 NRXN1Q9ULB1 1477 aa12.12□□□□□ -0.47
LRP6-204ENST00000540415 NRAPQ86VF7 1730 aa12.11□□□□□ -0.47
LRP6-204ENST00000540415 CAMKK2Q96RR4 588 aa12.11□□□□□ -0.47
LRP6-204ENST00000540415 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
LRP6-204ENST00000540415 SPATA31E1Q6ZUB1 1445 aa12.11□□□□□ -0.47
LRP6-204ENST00000540415 SPATA31A5Q5VU36 1347 aa12.11□□□□□ -0.47
LRP6-204ENST00000540415 SPATA31A7Q8IWB4 1347 aa12.11□□□□□ -0.47
LRP6-204ENST00000540415 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
LRP6-204ENST00000540415 TRIM37O94972 964 aa12.1□□□□□ -0.47
LRP6-204ENST00000540415 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
LRP6-204ENST00000540415 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.47
LRP6-204ENST00000540415 PRAM1Q96QH2 718 aa12.08□□□□□ -0.48
LRP6-204ENST00000540415 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
LRP6-204ENST00000540415 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
LRP6-204ENST00000540415 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
LRP6-204ENST00000540415 THSD7AQ9UPZ6 1657 aa12.06□□□□□ -0.48
LRP6-204ENST00000540415 ANKRD30BQ9BXX2 1392 aa12.06□□□□□ -0.48
LRP6-204ENST00000540415 IFT172Q9UG01 1749 aa12.06□□□□□ -0.48
LRP6-204ENST00000540415 APBA3O96018 575 aa12.06□□□□□ -0.48
LRP6-204ENST00000540415 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
LRP6-204ENST00000540415 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
LRP6-204ENST00000540415 CHRNA2Q15822 529 aa12.05□□□□□ -0.48
LRP6-204ENST00000540415 HIRIP3Q9BW71 556 aaPredicted RBP12.05□□□□□ -0.48
LRP6-204ENST00000540415 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms