RNA–Protein interactions for RNA: ENST00000540399.1

LINC02378-201, Transcript of long intergenic non-protein coding RNA 2378, humanhuman

TSL 5 BASIC

Gene LINC02378, Length 1,003 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02378-201ENST00000540399 FOXC1Q12948 553 aa9.65□□□□□ -0.86
LINC02378-201ENST00000540399 KDM4AO75164 1064 aa9.64□□□□□ -0.87
LINC02378-201ENST00000540399 Q3C1V9 767 aa9.64□□□□□ -0.87
LINC02378-201ENST00000540399 MMP16P51512 607 aa9.63□□□□□ -0.87
LINC02378-201ENST00000540399 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
LINC02378-201ENST00000540399 TOR4AQ9NXH8 423 aa9.63□□□□□ -0.87
LINC02378-201ENST00000540399 POTECB2RU33 542 aa9.62□□□□□ -0.87
LINC02378-201ENST00000540399 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
LINC02378-201ENST00000540399 AAASQ9NRG9 546 aa9.62□□□□□ -0.87
LINC02378-201ENST00000540399 USP46P62068 366 aa9.61□□□□□ -0.87
LINC02378-201ENST00000540399 ST8SIA5O15466 376 aa9.6□□□□□ -0.87
LINC02378-201ENST00000540399 HLA-CQ95604 372 aa9.6□□□□□ -0.87
LINC02378-201ENST00000540399 USB1Q9BQ65 265 aaKnown RBP9.6□□□□□ -0.87
LINC02378-201ENST00000540399 ZMYND10O75800 440 aa9.59□□□□□ -0.87
LINC02378-201ENST00000540399 AVPP01185 164 aa9.59□□□□□ -0.87
LINC02378-201ENST00000540399 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
LINC02378-201ENST00000540399 HOXA2O43364 376 aa9.58□□□□□ -0.88
LINC02378-201ENST00000540399 DXOO77932 396 aaKnown RBP9.58□□□□□ -0.88
LINC02378-201ENST00000540399 CRIPAKQ8N1N5 446 aa9.58□□□□□ -0.88
LINC02378-201ENST00000540399 GPCPD1Q9NPB8 672 aa9.58□□□□□ -0.88
LINC02378-201ENST00000540399 FAM217BQ9NTX9 383 aaPredicted RBP9.58□□□□□ -0.88
LINC02378-201ENST00000540399 CLCN1P35523 988 aa9.57□□□□□ -0.88
LINC02378-201ENST00000540399 CYP4X1Q8N118 509 aa9.57□□□□□ -0.88
LINC02378-201ENST00000540399 WNT7AO00755 349 aa9.55□□□□□ -0.88
LINC02378-201ENST00000540399 TRIM32Q13049 653 aa9.55□□□□□ -0.88
LINC02378-201ENST00000540399 GUCA2AQ02747 115 aa9.54□□□□□ -0.88
LINC02378-201ENST00000540399 BARGINQ6ZT62 677 aa9.54□□□□□ -0.88
LINC02378-201ENST00000540399 REPIN1Q9BWE0 567 aaKnown RBP9.54□□□□□ -0.88
LINC02378-201ENST00000540399 DACH1Q9UI36 760 aa9.53□□□□□ -0.88
LINC02378-201ENST00000540399 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
LINC02378-201ENST00000540399 CTC1Q2NKJ3 1217 aa9.51□□□□□ -0.89
LINC02378-201ENST00000540399 SYMPKQ92797 1274 aaKnown RBP9.51□□□□□ -0.89
LINC02378-201ENST00000540399 SLC24A3Q9HC58 644 aa9.51□□□□□ -0.89
LINC02378-201ENST00000540399 TTC24A2A3L6 582 aaPredicted RBP9.5□□□□□ -0.89
LINC02378-201ENST00000540399 AXIN1O15169 862 aa9.5□□□□□ -0.89
LINC02378-201ENST00000540399 SMPD1P17405 629 aa9.5□□□□□ -0.89
LINC02378-201ENST00000540399 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
LINC02378-201ENST00000540399 MRGPRX2Q96LB1 330 aa9.5□□□□□ -0.89
LINC02378-201ENST00000540399 JUNDP17535 347 aa9.49□□□□□ -0.89
LINC02378-201ENST00000540399 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
LINC02378-201ENST00000540399 SKOR1P84550 965 aa9.48□□□□□ -0.89
LINC02378-201ENST00000540399 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
LINC02378-201ENST00000540399 CCDC24Q8N4L8 307 aa9.48□□□□□ -0.89
LINC02378-201ENST00000540399 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
LINC02378-201ENST00000540399 SSTR3P32745 418 aaPredicted RBP9.47□□□□□ -0.89
LINC02378-201ENST00000540399 PCDHGC3Q9UN70 934 aa9.47□□□□□ -0.89
LINC02378-201ENST00000540399 J3QL48 77 aa9.46□□□□□ -0.9
LINC02378-201ENST00000540399 FDX1P10109 184 aa9.46□□□□□ -0.9
LINC02378-201ENST00000540399 WNT7BP56706 349 aa9.46□□□□□ -0.9
LINC02378-201ENST00000540399 GMPR2Q9P2T1 348 aaKnown RBP9.46□□□□□ -0.9
LINC02378-201ENST00000540399 LCE2AQ5TA79 106 aaPredicted RBP9.45□□□□□ -0.9
LINC02378-201ENST00000540399 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
LINC02378-201ENST00000540399 SPIRE2Q8WWL2 714 aa9.45□□□□□ -0.9
LINC02378-201ENST00000540399 AMHR2Q16671 573 aa9.44□□□□□ -0.9
LINC02378-201ENST00000540399 PTCRAQ6ISU1 281 aaPredicted RBP9.43□□□□□ -0.9
LINC02378-201ENST00000540399 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
LINC02378-201ENST00000540399 TREML4Q6UXN2 200 aa9.42□□□□□ -0.9
LINC02378-201ENST00000540399 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
LINC02378-201ENST00000540399 C11orf95C9JLR9 678 aaPredicted RBP9.41□□□□□ -0.9
LINC02378-201ENST00000540399 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
LINC02378-201ENST00000540399 HPS1Q92902 700 aa9.41□□□□□ -0.9
LINC02378-201ENST00000540399 AK7Q96M32 723 aa9.41□□□□□ -0.9
LINC02378-201ENST00000540399 NDUFV2P19404 249 aa9.4□□□□□ -0.9
LINC02378-201ENST00000540399 TTLL12Q14166 644 aaPredicted RBP9.4□□□□□ -0.9
LINC02378-201ENST00000540399 ATP13A2Q9NQ11 1180 aa9.4□□□□□ -0.9
LINC02378-201ENST00000540399 SIAH2O43255 324 aa9.39□□□□□ -0.91
LINC02378-201ENST00000540399 BRPF1P55201 1214 aaPredicted RBP9.39□□□□□ -0.91
LINC02378-201ENST00000540399 GIGYF2Q6Y7W6 1299 aaKnown RBP9.39□□□□□ -0.91
LINC02378-201ENST00000540399 TRIM66O15016 1216 aa9.38□□□□□ -0.91
LINC02378-201ENST00000540399 MS4A1P11836 297 aa9.38□□□□□ -0.91
LINC02378-201ENST00000540399 CCNYL3P0C7X3 344 aa9.37□□□□□ -0.91
LINC02378-201ENST00000540399 EVA1BQ9NVM1 165 aa9.37□□□□□ -0.91
LINC02378-201ENST00000540399 SH3BP2P78314 561 aa9.36□□□□□ -0.91
LINC02378-201ENST00000540399 PTPRNQ16849 979 aa9.36□□□□□ -0.91
LINC02378-201ENST00000540399 BEGAINQ9BUH8 593 aa9.36□□□□□ -0.91
LINC02378-201ENST00000540399 PRR7Q8TB68 274 aa9.35□□□□□ -0.91
LINC02378-201ENST00000540399 SPDYE5A6NIY4 337 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
LINC02378-201ENST00000540399 GJA5P36382 358 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 MTMR2Q13614 643 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 DESI1Q6ICB0 168 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 TRIM47Q96LD4 638 aa9.34□□□□□ -0.91
LINC02378-201ENST00000540399 NFX1Q12986 1120 aaKnown RBP9.33□□□□□ -0.92
LINC02378-201ENST00000540399 TBC1D2Q9BYX2 928 aa9.33□□□□□ -0.92
LINC02378-201ENST00000540399 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
LINC02378-201ENST00000540399 WFS1O76024 890 aa9.32□□□□□ -0.92
LINC02378-201ENST00000540399 PDE4DQ08499 809 aa9.32□□□□□ -0.92
LINC02378-201ENST00000540399 KCNH2Q12809 1159 aa9.32□□□□□ -0.92
LINC02378-201ENST00000540399 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
LINC02378-201ENST00000540399 DIXDC1Q155Q3 683 aa9.31□□□□□ -0.92
LINC02378-201ENST00000540399 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
LINC02378-201ENST00000540399 RSBN1LQ6PCB5 846 aaPredicted RBP9.31□□□□□ -0.92
LINC02378-201ENST00000540399 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
LINC02378-201ENST00000540399 SPTLC1O15269 473 aa9.3□□□□□ -0.92
LINC02378-201ENST00000540399 BAP1Q92560 729 aa9.3□□□□□ -0.92
LINC02378-201ENST00000540399 PCDHB15Q9Y5E8 787 aa9.3□□□□□ -0.92
LINC02378-201ENST00000540399 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms