RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
CYB561A3-215ENST00000540317 DCAF11Q8TEB1 546 aa16.63■□□□□ 0.25
CYB561A3-215ENST00000540317 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
CYB561A3-215ENST00000540317 LRPPRCP42704 1394 aaKnown RBP16.61■□□□□ 0.25
CYB561A3-215ENST00000540317 ABCC11Q96J66 1382 aa16.6■□□□□ 0.25
CYB561A3-215ENST00000540317 ORAI2Q96SN7 254 aa16.6■□□□□ 0.25
CYB561A3-215ENST00000540317 RGS17Q9UGC6 210 aaPredicted RBP16.6■□□□□ 0.25
CYB561A3-215ENST00000540317 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
CYB561A3-215ENST00000540317 ANP32CO43423 234 aa16.6■□□□□ 0.25
CYB561A3-215ENST00000540317 LRRC59Q96AG4 307 aaKnown RBP16.6■□□□□ 0.25
CYB561A3-215ENST00000540317 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
CYB561A3-215ENST00000540317 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
CYB561A3-215ENST00000540317 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
CYB561A3-215ENST00000540317 ASXL1Q8IXJ9 1541 aa16.59■□□□□ 0.25
CYB561A3-215ENST00000540317 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-215ENST00000540317 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
CYB561A3-215ENST00000540317 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
CYB561A3-215ENST00000540317 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.25
CYB561A3-215ENST00000540317 NUTM2FA1L443 756 aa16.58■□□□□ 0.24
CYB561A3-215ENST00000540317 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-215ENST00000540317 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-215ENST00000540317 ESCO1Q5FWF5 840 aa16.58■□□□□ 0.24
CYB561A3-215ENST00000540317 NUTM2AQ8IVF1 878 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-215ENST00000540317 COL16A1Q07092 1604 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-215ENST00000540317 AHDC1Q5TGY3 1603 aaPredicted RBP16.58■□□□□ 0.24
CYB561A3-215ENST00000540317 MYOM2P54296 1465 aa16.57■□□□□ 0.24
CYB561A3-215ENST00000540317 TECPR2O15040 1411 aa16.57■□□□□ 0.24
CYB561A3-215ENST00000540317 CCER2I3L3R5 266 aa16.56■□□□□ 0.24
CYB561A3-215ENST00000540317 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
CYB561A3-215ENST00000540317 STAC3Q96MF2 364 aa16.56■□□□□ 0.24
CYB561A3-215ENST00000540317 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
CYB561A3-215ENST00000540317 NRXN1Q9ULB1 1477 aa16.56■□□□□ 0.24
CYB561A3-215ENST00000540317 SIRT1Q96EB6 747 aa16.55■□□□□ 0.24
CYB561A3-215ENST00000540317 WASHC2AQ641Q2 1341 aa16.55■□□□□ 0.24
CYB561A3-215ENST00000540317 YTHDC1Q96MU7 727 aaKnown RBP16.55■□□□□ 0.24
CYB561A3-215ENST00000540317 POGKQ9P215 609 aa16.55■□□□□ 0.24
CYB561A3-215ENST00000540317 CCDC7Q96M83 1385 aa16.54■□□□□ 0.24
CYB561A3-215ENST00000540317 POTEAQ6S8J7 498 aa16.54■□□□□ 0.24
CYB561A3-215ENST00000540317 PRAM1Q96QH2 718 aa16.54■□□□□ 0.24
CYB561A3-215ENST00000540317 USP47Q96K76 1375 aa16.54■□□□□ 0.24
CYB561A3-215ENST00000540317 TRAK1Q9UPV9 953 aa16.53■□□□□ 0.24
CYB561A3-215ENST00000540317 FOXO3O43524 673 aa16.51■□□□□ 0.23
CYB561A3-215ENST00000540317 CARD11Q9BXL7 1154 aa16.51■□□□□ 0.23
CYB561A3-215ENST00000540317 SOS2Q07890 1332 aaPredicted RBP16.5■□□□□ 0.23
CYB561A3-215ENST00000540317 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
CYB561A3-215ENST00000540317 XPCQ01831 940 aaPredicted RBP16.49■□□□□ 0.23
CYB561A3-215ENST00000540317 LRP6O75581 1613 aa16.49■□□□□ 0.23
CYB561A3-215ENST00000540317 CDC42BPGQ6DT37 1551 aa16.49■□□□□ 0.23
CYB561A3-215ENST00000540317 ROCK2O75116 1388 aaKnown RBP16.48■□□□□ 0.23
CYB561A3-215ENST00000540317 LAMC1P11047 1609 aa16.48■□□□□ 0.23
CYB561A3-215ENST00000540317 NHSL1Q5SYE7 1610 aa16.48■□□□□ 0.23
CYB561A3-215ENST00000540317 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
CYB561A3-215ENST00000540317 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
CYB561A3-215ENST00000540317 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
CYB561A3-215ENST00000540317 GPRASP1Q5JY77 1395 aa16.47■□□□□ 0.23
CYB561A3-215ENST00000540317 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
CYB561A3-215ENST00000540317 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
CYB561A3-215ENST00000540317 KNDC1Q76NI1 1749 aa16.46■□□□□ 0.23
CYB561A3-215ENST00000540317 ADAMTS2O95450 1211 aa16.46■□□□□ 0.23
CYB561A3-215ENST00000540317 TRPM1Q7Z4N2 1603 aa16.46■□□□□ 0.23
CYB561A3-215ENST00000540317 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
CYB561A3-215ENST00000540317 C11orf95C9JLR9 678 aaPredicted RBP16.45■□□□□ 0.22
CYB561A3-215ENST00000540317 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
CYB561A3-215ENST00000540317 NGLY1Q96IV0 654 aa16.43■□□□□ 0.22
CYB561A3-215ENST00000540317 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
CYB561A3-215ENST00000540317 AFF2P51816 1311 aa16.43■□□□□ 0.22
CYB561A3-215ENST00000540317 KRT28Q7Z3Y7 464 aa16.43■□□□□ 0.22
CYB561A3-215ENST00000540317 DLC1Q96QB1 1528 aa16.42■□□□□ 0.22
CYB561A3-215ENST00000540317 PSME1Q06323 249 aa16.41■□□□□ 0.22
CYB561A3-215ENST00000540317 PMFBP1Q8TBY8 1022 aa16.41■□□□□ 0.22
CYB561A3-215ENST00000540317 RXRBP28702 533 aa16.4■□□□□ 0.22
CYB561A3-215ENST00000540317 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
CYB561A3-215ENST00000540317 WASLO00401 505 aaPredicted RBP16.39■□□□□ 0.21
CYB561A3-215ENST00000540317 FMN2Q9NZ56 1722 aa16.39■□□□□ 0.21
CYB561A3-215ENST00000540317 PXDNQ92626 1479 aa16.39■□□□□ 0.21
CYB561A3-215ENST00000540317 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
CYB561A3-215ENST00000540317 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
CYB561A3-215ENST00000540317 QTRT2Q9H974 415 aaKnown RBP16.38■□□□□ 0.21
CYB561A3-215ENST00000540317 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
CYB561A3-215ENST00000540317 SPATA31A3Q5VYP0 1347 aa16.37■□□□□ 0.21
CYB561A3-215ENST00000540317 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
CYB561A3-215ENST00000540317 USP21Q9UK80 565 aa16.35■□□□□ 0.21
CYB561A3-215ENST00000540317 EIF3AQ14152 1382 aaKnown RBP16.35■□□□□ 0.21
CYB561A3-215ENST00000540317 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
CYB561A3-215ENST00000540317 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
CYB561A3-215ENST00000540317 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
CYB561A3-215ENST00000540317 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
CYB561A3-215ENST00000540317 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
CYB561A3-215ENST00000540317 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.2
CYB561A3-215ENST00000540317 NUDT16Q96DE0 195 aaKnown RBP16.33■□□□□ 0.2
CYB561A3-215ENST00000540317 GTF3C3Q9Y5Q9 886 aa16.33■□□□□ 0.2
CYB561A3-215ENST00000540317 KIF1AQ12756 1690 aa16.32■□□□□ 0.2
CYB561A3-215ENST00000540317 KIAA1210Q9ULL0 1709 aa16.32■□□□□ 0.2
CYB561A3-215ENST00000540317 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
CYB561A3-215ENST00000540317 FNBP4Q8N3X1 1017 aaPredicted RBP16.32■□□□□ 0.2
CYB561A3-215ENST00000540317 CABLES1Q8TDN4 633 aa16.32■□□□□ 0.2
CYB561A3-215ENST00000540317 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
CYB561A3-215ENST00000540317 ADGRB2O60241 1585 aa16.31■□□□□ 0.2
CYB561A3-215ENST00000540317 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
CYB561A3-215ENST00000540317 TNS3Q68CZ2 1445 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms