RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 SLIT2O94813 1529 aa16.27■□□□□ 0.2
SSPN-207ENST00000540266 ADGRL2O95490 1459 aa16.27■□□□□ 0.19
SSPN-207ENST00000540266 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.19
SSPN-207ENST00000540266 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.19
SSPN-207ENST00000540266 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
SSPN-207ENST00000540266 BAG6P46379 1132 aa16.24■□□□□ 0.19
SSPN-207ENST00000540266 KRT27Q7Z3Y8 459 aa16.24■□□□□ 0.19
SSPN-207ENST00000540266 PXDNQ92626 1479 aa16.23■□□□□ 0.19
SSPN-207ENST00000540266 VPS72Q15906 364 aa16.23■□□□□ 0.19
SSPN-207ENST00000540266 ROBO2Q9HCK4 1378 aa16.23■□□□□ 0.19
SSPN-207ENST00000540266 NALCNQ8IZF0 1738 aa16.22■□□□□ 0.19
SSPN-207ENST00000540266 R3HDM1Q15032 1099 aaKnown RBP16.22■□□□□ 0.19
SSPN-207ENST00000540266 SPHKAPQ2M3C7 1700 aa16.21■□□□□ 0.19
SSPN-207ENST00000540266 FOXO3O43524 673 aa16.2■□□□□ 0.18
SSPN-207ENST00000540266 EN1Q05925 392 aaPredicted RBP16.2■□□□□ 0.18
SSPN-207ENST00000540266 ESCO1Q5FWF5 840 aa16.2■□□□□ 0.18
SSPN-207ENST00000540266 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
SSPN-207ENST00000540266 IFFO2Q5TF58 517 aa16.18■□□□□ 0.18
SSPN-207ENST00000540266 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.18■□□□□ 0.18
SSPN-207ENST00000540266 PRAG1Q86YV5 1406 aa16.18■□□□□ 0.18
SSPN-207ENST00000540266 E9PCH4 1651 aa16.17■□□□□ 0.18
SSPN-207ENST00000540266 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
SSPN-207ENST00000540266 SPATA31A3Q5VYP0 1347 aa16.15■□□□□ 0.18
SSPN-207ENST00000540266 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
SSPN-207ENST00000540266 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
SSPN-207ENST00000540266 DISP2A7MBM2 1401 aa16.13■□□□□ 0.17
SSPN-207ENST00000540266 IQGAP3Q86VI3 1631 aa16.13■□□□□ 0.17
SSPN-207ENST00000540266 HFM1A2PYH4 1435 aa16.12■□□□□ 0.17
SSPN-207ENST00000540266 MARF1Q9Y4F3 1742 aaKnown RBP16.12■□□□□ 0.17
SSPN-207ENST00000540266 CAMKK2Q96RR4 588 aa16.11■□□□□ 0.17
SSPN-207ENST00000540266 NUP155O75694 1391 aa16.11■□□□□ 0.17
SSPN-207ENST00000540266 EZH2Q15910 746 aaKnown RBP16.1■□□□□ 0.17
SSPN-207ENST00000540266 CCDC9Q9Y3X0 531 aaKnown RBP16.09■□□□□ 0.17
SSPN-207ENST00000540266 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
SSPN-207ENST00000540266 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
SSPN-207ENST00000540266 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.16
SSPN-207ENST00000540266 FAM182BQ5T319 152 aa16.07■□□□□ 0.16
SSPN-207ENST00000540266 CABLES1Q8TDN4 633 aa16.07■□□□□ 0.16
SSPN-207ENST00000540266 VGFO15240 615 aaPredicted RBP16.06■□□□□ 0.16
SSPN-207ENST00000540266 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
SSPN-207ENST00000540266 KRT28Q7Z3Y7 464 aa16.06■□□□□ 0.16
SSPN-207ENST00000540266 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
SSPN-207ENST00000540266 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
SSPN-207ENST00000540266 ZNF784Q8NCA9 323 aaPredicted RBP16.04■□□□□ 0.16
SSPN-207ENST00000540266 NUTM2FA1L443 756 aa16.03■□□□□ 0.16
SSPN-207ENST00000540266 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
SSPN-207ENST00000540266 ROCK1Q13464 1354 aa16.02■□□□□ 0.16
SSPN-207ENST00000540266 A0A0G2JS52 829 aa16.02■□□□□ 0.16
SSPN-207ENST00000540266 MYT1Q01538 1121 aa16.02■□□□□ 0.16
SSPN-207ENST00000540266 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.15
SSPN-207ENST00000540266 NAIPQ13075 1403 aa16.02■□□□□ 0.15
SSPN-207ENST00000540266 PARD3Q8TEW0 1356 aa16.01■□□□□ 0.15
SSPN-207ENST00000540266 UTRNP46939 3433 aa16.01■□□□□ 0.15
SSPN-207ENST00000540266 HAP1P54257 671 aaPredicted RBP16.01■□□□□ 0.15
SSPN-207ENST00000540266 NINLQ9Y2I6 1382 aa16■□□□□ 0.15
SSPN-207ENST00000540266 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
SSPN-207ENST00000540266 APLP2Q06481 763 aa16■□□□□ 0.15
SSPN-207ENST00000540266 WAPLQ7Z5K2 1190 aa16■□□□□ 0.15
SSPN-207ENST00000540266 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
SSPN-207ENST00000540266 SPON1Q9HCB6 807 aa15.99■□□□□ 0.15
SSPN-207ENST00000540266 TNS3Q68CZ2 1445 aa15.99■□□□□ 0.15
SSPN-207ENST00000540266 SPATA31A5Q5VU36 1347 aa15.98■□□□□ 0.15
SSPN-207ENST00000540266 SPATA31A7Q8IWB4 1347 aa15.98■□□□□ 0.15
SSPN-207ENST00000540266 KCNQ2O43526 872 aa15.98■□□□□ 0.15
SSPN-207ENST00000540266 TRIM37O94972 964 aa15.98■□□□□ 0.15
SSPN-207ENST00000540266 BTG4Q9NY30 223 aa15.98■□□□□ 0.15
SSPN-207ENST00000540266 NWD2Q9ULI1 1742 aa15.98■□□□□ 0.15
SSPN-207ENST00000540266 RPGRIP1LQ68CZ1 1315 aa15.97■□□□□ 0.15
SSPN-207ENST00000540266 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
SSPN-207ENST00000540266 APBA3O96018 575 aa15.97■□□□□ 0.15
SSPN-207ENST00000540266 C1QTNF8P60827 252 aa15.97■□□□□ 0.15
SSPN-207ENST00000540266 PSME1Q06323 249 aa15.97■□□□□ 0.15
SSPN-207ENST00000540266 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
SSPN-207ENST00000540266 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
SSPN-207ENST00000540266 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
SSPN-207ENST00000540266 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
SSPN-207ENST00000540266 RGPD1P0DJD0 1748 aa15.96■□□□□ 0.15
SSPN-207ENST00000540266 TECPR2O15040 1411 aa15.95■□□□□ 0.14
SSPN-207ENST00000540266 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
SSPN-207ENST00000540266 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
SSPN-207ENST00000540266 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
SSPN-207ENST00000540266 NBPF14Q5TI25 921 aa15.94■□□□□ 0.14
SSPN-207ENST00000540266 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
SSPN-207ENST00000540266 ARHGEF10O15013 1369 aa15.94■□□□□ 0.14
SSPN-207ENST00000540266 PLCH1Q4KWH8 1693 aa15.94■□□□□ 0.14
SSPN-207ENST00000540266 PLEKHH1Q9ULM0 1364 aa15.93■□□□□ 0.14
SSPN-207ENST00000540266 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
SSPN-207ENST00000540266 CLTCL1P53675 1640 aa15.93■□□□□ 0.14
SSPN-207ENST00000540266 ABCC11Q96J66 1382 aa15.92■□□□□ 0.14
SSPN-207ENST00000540266 CEP350Q5VT06 3117 aa15.92■□□□□ 0.14
SSPN-207ENST00000540266 STK26Q9P289 416 aa15.91■□□□□ 0.14
SSPN-207ENST00000540266 THSD7AQ9UPZ6 1657 aa15.9■□□□□ 0.14
SSPN-207ENST00000540266 LMOD2Q6P5Q4 547 aa15.9■□□□□ 0.14
SSPN-207ENST00000540266 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
SSPN-207ENST00000540266 SIRT1Q96EB6 747 aa15.88■□□□□ 0.13
SSPN-207ENST00000540266 SPATA31A1Q5TZJ5 1347 aa15.88■□□□□ 0.13
SSPN-207ENST00000540266 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
SSPN-207ENST00000540266 KIF1AQ12756 1690 aa15.87■□□□□ 0.13
SSPN-207ENST00000540266 NRXN1Q9ULB1 1477 aa15.87■□□□□ 0.13
SSPN-207ENST00000540266 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms