RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 FIBPO43427 364 aa13.41□□□□□ -0.26
PBX1-212ENST00000540236 MCCP23508 829 aa13.41□□□□□ -0.26
PBX1-212ENST00000540236 PEG3Q9GZU2 1588 aa13.41□□□□□ -0.26
PBX1-212ENST00000540236 GPS2Q13227 327 aa13.41□□□□□ -0.26
PBX1-212ENST00000540236 LOC102724159A0A0B4J2E5 919 aa13.4□□□□□ -0.26
PBX1-212ENST00000540236 PWP2Q15269 919 aaKnown RBP13.4□□□□□ -0.26
PBX1-212ENST00000540236 MYRIPQ8NFW9 859 aa13.4□□□□□ -0.26
PBX1-212ENST00000540236 TMEM51Q9NW97 253 aa13.4□□□□□ -0.26
PBX1-212ENST00000540236 KRBA2Q6ZNG9 492 aa13.4□□□□□ -0.26
PBX1-212ENST00000540236 DEF6Q9H4E7 631 aa13.4□□□□□ -0.26
PBX1-212ENST00000540236 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
PBX1-212ENST00000540236 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
PBX1-212ENST00000540236 LARP6Q9BRS8 491 aaKnown RBP13.4□□□□□ -0.26
PBX1-212ENST00000540236 FHOD3Q2V2M9 1422 aa13.4□□□□□ -0.26
PBX1-212ENST00000540236 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
PBX1-212ENST00000540236 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
PBX1-212ENST00000540236 DZIP1LQ8IYY4 767 aaKnown RBP13.39□□□□□ -0.27
PBX1-212ENST00000540236 ZKSCAN2Q63HK3 967 aa13.39□□□□□ -0.27
PBX1-212ENST00000540236 LEKR1Q6ZMV7 388 aa13.39□□□□□ -0.27
PBX1-212ENST00000540236 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
PBX1-212ENST00000540236 RSPH14Q9UHP6 348 aa13.39□□□□□ -0.27
PBX1-212ENST00000540236 OGFRQ9NZT2 677 aa13.39□□□□□ -0.27
PBX1-212ENST00000540236 KDM2BQ8NHM5 1336 aa13.39□□□□□ -0.27
PBX1-212ENST00000540236 GOLGA6L19H0YKK7 550 aa13.38□□□□□ -0.27
PBX1-212ENST00000540236 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
PBX1-212ENST00000540236 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
PBX1-212ENST00000540236 PRIMPOLQ96LW4 560 aa13.37□□□□□ -0.27
PBX1-212ENST00000540236 DTNBO60941 627 aa13.37□□□□□ -0.27
PBX1-212ENST00000540236 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
PBX1-212ENST00000540236 LMAN1P49257 510 aa13.37□□□□□ -0.27
PBX1-212ENST00000540236 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
PBX1-212ENST00000540236 CREBRFQ8IUR6 639 aa13.37□□□□□ -0.27
PBX1-212ENST00000540236 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
PBX1-212ENST00000540236 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
PBX1-212ENST00000540236 KLHL40Q2TBA0 621 aa13.36□□□□□ -0.27
PBX1-212ENST00000540236 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
PBX1-212ENST00000540236 LRSAM1Q6UWE0 723 aa13.36□□□□□ -0.27
PBX1-212ENST00000540236 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
PBX1-212ENST00000540236 NRDCO43847 1150 aa13.36□□□□□ -0.27
PBX1-212ENST00000540236 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
PBX1-212ENST00000540236 TSR2Q969E8 191 aaKnown RBP13.36□□□□□ -0.27
PBX1-212ENST00000540236 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
PBX1-212ENST00000540236 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
PBX1-212ENST00000540236 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
PBX1-212ENST00000540236 PLCD4Q9BRC7 762 aa13.35□□□□□ -0.27
PBX1-212ENST00000540236 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
PBX1-212ENST00000540236 CENPHQ9H3R5 247 aa13.34□□□□□ -0.27
PBX1-212ENST00000540236 NEK4P51957 841 aa13.34□□□□□ -0.27
PBX1-212ENST00000540236 NGEFQ8N5V2 710 aa13.34□□□□□ -0.27
PBX1-212ENST00000540236 NEK11Q8NG66 645 aa13.34□□□□□ -0.27
PBX1-212ENST00000540236 BRD2P25440 801 aaKnown RBP13.34□□□□□ -0.27
PBX1-212ENST00000540236 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
PBX1-212ENST00000540236 BECN2A8MW95 431 aa13.34□□□□□ -0.27
PBX1-212ENST00000540236 RAB3GAP1Q15042 981 aa13.34□□□□□ -0.27
PBX1-212ENST00000540236 EP400NLQ6ZTU2 488 aa13.33□□□□□ -0.27
PBX1-212ENST00000540236 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.27
PBX1-212ENST00000540236 SMARCA2P51531 1590 aa13.33□□□□□ -0.27
PBX1-212ENST00000540236 NOC3LQ8WTT2 800 aaKnown RBP13.33□□□□□ -0.28
PBX1-212ENST00000540236 H0YHG0 523 aa13.33□□□□□ -0.28
PBX1-212ENST00000540236 FAM193AP78312 1265 aa13.33□□□□□ -0.28
PBX1-212ENST00000540236 CEBPZQ03701 1054 aaKnown RBP13.33□□□□□ -0.28
PBX1-212ENST00000540236 MLECQ14165 292 aa13.33□□□□□ -0.28
PBX1-212ENST00000540236 SAFB2Q14151 953 aaKnown RBP eCLIP13.33□□□□□ -0.28
PBX1-212ENST00000540236 DUSP27Q5VZP5 1158 aa13.33□□□□□ -0.28
PBX1-212ENST00000540236 RNF123Q5XPI4 1314 aa13.33□□□□□ -0.28
PBX1-212ENST00000540236 NCOA1Q15788 1441 aa13.33□□□□□ -0.28
PBX1-212ENST00000540236 TSPYL1Q9H0U9 437 aa13.32□□□□□ -0.28
PBX1-212ENST00000540236 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
PBX1-212ENST00000540236 RASSF4Q9H2L5 321 aa13.32□□□□□ -0.28
PBX1-212ENST00000540236 ANTXR1Q9H6X2 564 aa13.32□□□□□ -0.28
PBX1-212ENST00000540236 NOB1Q9ULX3 412 aaKnown RBP13.32□□□□□ -0.28
PBX1-212ENST00000540236 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
PBX1-212ENST00000540236 KIF27Q86VH2 1401 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 FBLN2P98095 1184 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 GIMAP6Q6P9H5 292 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 FILIP1Q7Z7B0 1213 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 ZGPATQ8N5A5 531 aaKnown RBP13.31□□□□□ -0.28
PBX1-212ENST00000540236 AK7Q96M32 723 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 SLFN5Q08AF3 891 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 CDC45O75419 566 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 PTGS1P23219 599 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 CEP135Q66GS9 1140 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 BICD2Q8TD16 824 aa13.31□□□□□ -0.28
PBX1-212ENST00000540236 LRRC9Q6ZRR7 1453 aa13.3□□□□□ -0.28
PBX1-212ENST00000540236 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
PBX1-212ENST00000540236 ST7Q9NRC1 585 aa13.3□□□□□ -0.28
PBX1-212ENST00000540236 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
PBX1-212ENST00000540236 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
PBX1-212ENST00000540236 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
PBX1-212ENST00000540236 TPM4P67936 248 aa13.29□□□□□ -0.28
PBX1-212ENST00000540236 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
PBX1-212ENST00000540236 SLC4A10Q6U841 1118 aa13.29□□□□□ -0.28
PBX1-212ENST00000540236 GIMAP7Q8NHV1 300 aa13.29□□□□□ -0.28
PBX1-212ENST00000540236 MAP4K4O95819 1239 aaPredicted RBP13.29□□□□□ -0.28
PBX1-212ENST00000540236 MCM5P33992 734 aa13.29□□□□□ -0.28
PBX1-212ENST00000540236 DHX8Q14562 1220 aaKnown RBP13.29□□□□□ -0.28
PBX1-212ENST00000540236 CIZ1Q9ULV3 898 aaPredicted RBP13.29□□□□□ -0.28
PBX1-212ENST00000540236 MBD3O95983 291 aa13.29□□□□□ -0.28
PBX1-212ENST00000540236 TDO2P48775 406 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms