RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 CABP2Q9NPB3 220 aa9.48□□□□□ -0.89
CDH19-203ENST00000540086 ROBO2Q9HCK4 1378 aa9.48□□□□□ -0.89
CDH19-203ENST00000540086 NCKAP5LQ9HCH0 1330 aa9.47□□□□□ -0.89
CDH19-203ENST00000540086 TECPR2O15040 1411 aa9.47□□□□□ -0.89
CDH19-203ENST00000540086 AMOTL2Q9Y2J4 779 aa9.47□□□□□ -0.89
CDH19-203ENST00000540086 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.89
CDH19-203ENST00000540086 SRPK2P78362 688 aaKnown RBP9.46□□□□□ -0.89
CDH19-203ENST00000540086 TMC1Q8TDI8 760 aa9.46□□□□□ -0.89
CDH19-203ENST00000540086 YTHDC1Q96MU7 727 aaKnown RBP9.46□□□□□ -0.9
CDH19-203ENST00000540086 FAM135BQ49AJ0 1406 aa9.46□□□□□ -0.9
CDH19-203ENST00000540086 SETD1BQ9UPS6 1966 aaKnown RBP9.45□□□□□ -0.9
CDH19-203ENST00000540086 CCER2I3L3R5 266 aa9.45□□□□□ -0.9
CDH19-203ENST00000540086 PPP4R3CPQ6ZMV5 832 aa9.45□□□□□ -0.9
CDH19-203ENST00000540086 SIRT1Q96EB6 747 aa9.45□□□□□ -0.9
CDH19-203ENST00000540086 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
CDH19-203ENST00000540086 SLC12A5Q9H2X9 1139 aa9.45□□□□□ -0.9
CDH19-203ENST00000540086 NPHP4O75161 1426 aaPredicted RBP9.45□□□□□ -0.9
CDH19-203ENST00000540086 CPS1P31327 1500 aa9.45□□□□□ -0.9
CDH19-203ENST00000540086 HSPA2P54652 639 aa9.44□□□□□ -0.9
CDH19-203ENST00000540086 DIP2AQ14689 1571 aa9.44□□□□□ -0.9
CDH19-203ENST00000540086 PUS7Q96PZ0 661 aaKnown RBP9.44□□□□□ -0.9
CDH19-203ENST00000540086 KNSTRNQ9Y448 316 aa9.44□□□□□ -0.9
CDH19-203ENST00000540086 KCNA6P17658 529 aa9.43□□□□□ -0.9
CDH19-203ENST00000540086 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
CDH19-203ENST00000540086 CARD14Q9BXL6 1004 aa9.43□□□□□ -0.9
CDH19-203ENST00000540086 KTN1Q86UP2 1357 aaKnown RBP9.43□□□□□ -0.9
CDH19-203ENST00000540086 WASLO00401 505 aaPredicted RBP9.43□□□□□ -0.9
CDH19-203ENST00000540086 MYOM1P52179 1685 aa9.43□□□□□ -0.9
CDH19-203ENST00000540086 ATAD2Q6PL18 1390 aa9.42□□□□□ -0.9
CDH19-203ENST00000540086 PIK3R4Q99570 1358 aa9.42□□□□□ -0.9
CDH19-203ENST00000540086 PTCH1Q13635 1447 aa9.42□□□□□ -0.9
CDH19-203ENST00000540086 CCDC184Q52MB2 194 aa9.42□□□□□ -0.9
CDH19-203ENST00000540086 KNDC1Q76NI1 1749 aa9.41□□□□□ -0.9
CDH19-203ENST00000540086 RALBP1Q15311 655 aa9.41□□□□□ -0.9
CDH19-203ENST00000540086 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
CDH19-203ENST00000540086 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
CDH19-203ENST00000540086 CABP1Q9NZU7 370 aa9.4□□□□□ -0.9
CDH19-203ENST00000540086 PARD3Q8TEW0 1356 aa9.4□□□□□ -0.9
CDH19-203ENST00000540086 NSD3Q9BZ95 1437 aa9.4□□□□□ -0.91
CDH19-203ENST00000540086 LMTK3Q96Q04 1460 aa9.4□□□□□ -0.91
CDH19-203ENST00000540086 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
CDH19-203ENST00000540086 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
CDH19-203ENST00000540086 ANKRD36BQ8N2N9 1353 aa9.39□□□□□ -0.91
CDH19-203ENST00000540086 NINLQ9Y2I6 1382 aa9.39□□□□□ -0.91
CDH19-203ENST00000540086 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
CDH19-203ENST00000540086 NUDT16Q96DE0 195 aaKnown RBP9.39□□□□□ -0.91
CDH19-203ENST00000540086 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
CDH19-203ENST00000540086 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
CDH19-203ENST00000540086 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
CDH19-203ENST00000540086 XRN1Q8IZH2 1706 aaKnown RBP9.39□□□□□ -0.91
CDH19-203ENST00000540086 PRR36Q9H6K5 1346 aa9.38□□□□□ -0.91
CDH19-203ENST00000540086 TERF2IPQ9NYB0 399 aa9.37□□□□□ -0.91
CDH19-203ENST00000540086 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.37□□□□□ -0.91
CDH19-203ENST00000540086 CD163L1Q9NR16 1453 aa9.37□□□□□ -0.91
CDH19-203ENST00000540086 NPC1L1Q9UHC9 1359 aa9.37□□□□□ -0.91
CDH19-203ENST00000540086 HDGFL2Q7Z4V5 671 aaPredicted RBP9.37□□□□□ -0.91
CDH19-203ENST00000540086 PPIP5K1Q6PFW1 1433 aa9.36□□□□□ -0.91
CDH19-203ENST00000540086 CCDC61Q9Y6R9 512 aa9.36□□□□□ -0.91
CDH19-203ENST00000540086 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
CDH19-203ENST00000540086 ATP7BP35670 1465 aa9.36□□□□□ -0.91
CDH19-203ENST00000540086 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
CDH19-203ENST00000540086 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
CDH19-203ENST00000540086 FAM9BQ8IZU0 186 aa9.35□□□□□ -0.91
CDH19-203ENST00000540086 BRD4O60885 1362 aaPredicted RBP9.34□□□□□ -0.91
CDH19-203ENST00000540086 PPP2R1AP30153 589 aa9.34□□□□□ -0.91
CDH19-203ENST00000540086 C14orf37Q86TY3 774 aa9.34□□□□□ -0.91
CDH19-203ENST00000540086 PROSER2Q86WR7 435 aaPredicted RBP9.34□□□□□ -0.91
CDH19-203ENST00000540086 TNNT2P45379 298 aaPredicted RBP9.33□□□□□ -0.92
CDH19-203ENST00000540086 MORC1Q86VD1 984 aa9.33□□□□□ -0.92
CDH19-203ENST00000540086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
CDH19-203ENST00000540086 CHD2O14647 1828 aaKnown RBP9.33□□□□□ -0.92
CDH19-203ENST00000540086 NWD1Q149M9 1564 aa9.32□□□□□ -0.92
CDH19-203ENST00000540086 CPSF1Q10570 1443 aaKnown RBP9.32□□□□□ -0.92
CDH19-203ENST00000540086 ADGRL3Q9HAR2 1447 aa9.32□□□□□ -0.92
CDH19-203ENST00000540086 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
CDH19-203ENST00000540086 ACEP12821 1306 aa9.32□□□□□ -0.92
CDH19-203ENST00000540086 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
CDH19-203ENST00000540086 FYB1O15117 783 aa9.32□□□□□ -0.92
CDH19-203ENST00000540086 CENPBP07199 599 aaPredicted RBP9.32□□□□□ -0.92
CDH19-203ENST00000540086 PMFBP1Q8TBY8 1022 aa9.32□□□□□ -0.92
CDH19-203ENST00000540086 NKTRP30414 1462 aaKnown RBP9.31□□□□□ -0.92
CDH19-203ENST00000540086 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
CDH19-203ENST00000540086 NSD2O96028 1365 aa9.31□□□□□ -0.92
CDH19-203ENST00000540086 CDC42BPGQ6DT37 1551 aa9.31□□□□□ -0.92
CDH19-203ENST00000540086 ANKARQ7Z5J8 1434 aa9.31□□□□□ -0.92
CDH19-203ENST00000540086 ZBTB22O15209 634 aa9.3□□□□□ -0.92
CDH19-203ENST00000540086 TMEM94Q12767 1356 aa9.3□□□□□ -0.92
CDH19-203ENST00000540086 USP32Q8NFA0 1604 aa9.3□□□□□ -0.92
CDH19-203ENST00000540086 EDC4Q6P2E9 1401 aaKnown RBP9.3□□□□□ -0.92
CDH19-203ENST00000540086 NME9Q86XW9 330 aa9.3□□□□□ -0.92
CDH19-203ENST00000540086 NGDNQ8NEJ9 315 aaKnown RBP9.3□□□□□ -0.92
CDH19-203ENST00000540086 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
CDH19-203ENST00000540086 ZNF335Q9H4Z2 1342 aaPredicted RBP9.29□□□□□ -0.92
CDH19-203ENST00000540086 NALCNQ8IZF0 1738 aa9.29□□□□□ -0.92
CDH19-203ENST00000540086 NPM3O75607 178 aaKnown RBP9.29□□□□□ -0.92
CDH19-203ENST00000540086 HNRNPUQ00839 825 aaKnown RBP eCLIP9.29□□□□□ -0.92
CDH19-203ENST00000540086 STRCQ7RTU9 1775 aa9.28□□□□□ -0.92
CDH19-203ENST00000540086 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
CDH19-203ENST00000540086 TOPAZ1Q8N9V7 1692 aa9.28□□□□□ -0.92
CDH19-203ENST00000540086 C19orf44Q9H6X5 657 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms