RNA–Protein interactions for RNA: ENST00000539581.1

PGA4-203, Transcript of pepsinogen 4, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA4, Length 642 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA4-203ENST00000539581 POGKQ9P215 609 aa17.45■□□□□ 0.38
PGA4-203ENST00000539581 TRAK1Q9UPV9 953 aa17.44■□□□□ 0.38
PGA4-203ENST00000539581 QRICH2Q9H0J4 1663 aa17.43■□□□□ 0.38
PGA4-203ENST00000539581 PRAM1Q96QH2 718 aa17.43■□□□□ 0.38
PGA4-203ENST00000539581 FMN2Q9NZ56 1722 aa17.42■□□□□ 0.38
PGA4-203ENST00000539581 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
PGA4-203ENST00000539581 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
PGA4-203ENST00000539581 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
PGA4-203ENST00000539581 CARD11Q9BXL7 1154 aa17.41■□□□□ 0.38
PGA4-203ENST00000539581 ROBO1Q9Y6N7 1651 aa17.4■□□□□ 0.38
PGA4-203ENST00000539581 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
PGA4-203ENST00000539581 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
PGA4-203ENST00000539581 CENPJQ9HC77 1338 aaPredicted RBP17.39■□□□□ 0.37
PGA4-203ENST00000539581 MST1RQ04912 1400 aa17.38■□□□□ 0.37
PGA4-203ENST00000539581 ITSN1Q15811 1721 aa17.38■□□□□ 0.37
PGA4-203ENST00000539581 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
PGA4-203ENST00000539581 SLC24A1O60721 1099 aa17.37■□□□□ 0.37
PGA4-203ENST00000539581 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
PGA4-203ENST00000539581 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
PGA4-203ENST00000539581 SBNO2Q9Y2G9 1366 aa17.36■□□□□ 0.37
PGA4-203ENST00000539581 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
PGA4-203ENST00000539581 PIP4K2BP78356 416 aa17.35■□□□□ 0.37
PGA4-203ENST00000539581 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
PGA4-203ENST00000539581 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
PGA4-203ENST00000539581 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
PGA4-203ENST00000539581 NHSL1Q5SYE7 1610 aa17.33■□□□□ 0.37
PGA4-203ENST00000539581 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.37
PGA4-203ENST00000539581 MINK1Q8N4C8 1332 aaPredicted RBP17.31■□□□□ 0.36
PGA4-203ENST00000539581 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
PGA4-203ENST00000539581 USP47Q96K76 1375 aa17.3■□□□□ 0.36
PGA4-203ENST00000539581 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
PGA4-203ENST00000539581 RGPD8O14715 1765 aaPredicted RBP17.29■□□□□ 0.36
PGA4-203ENST00000539581 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
PGA4-203ENST00000539581 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
PGA4-203ENST00000539581 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
PGA4-203ENST00000539581 ATP7BP35670 1465 aa17.27■□□□□ 0.36
PGA4-203ENST00000539581 BRINP3Q76B58 766 aa17.27■□□□□ 0.36
PGA4-203ENST00000539581 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.36
PGA4-203ENST00000539581 ILDR1Q86SU0 546 aaPredicted RBP17.26■□□□□ 0.35
PGA4-203ENST00000539581 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
PGA4-203ENST00000539581 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
PGA4-203ENST00000539581 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
PGA4-203ENST00000539581 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
PGA4-203ENST00000539581 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
PGA4-203ENST00000539581 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
PGA4-203ENST00000539581 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
PGA4-203ENST00000539581 SHPRHQ149N8 1683 aa17.21■□□□□ 0.35
PGA4-203ENST00000539581 ST20-MTHFSA0A0A6YYL1 179 aa17.21■□□□□ 0.35
PGA4-203ENST00000539581 CDCA8Q53HL2 280 aa17.21■□□□□ 0.35
PGA4-203ENST00000539581 PUS7Q96PZ0 661 aaKnown RBP17.21■□□□□ 0.35
PGA4-203ENST00000539581 NUTM2FA1L443 756 aa17.2■□□□□ 0.34
PGA4-203ENST00000539581 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
PGA4-203ENST00000539581 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
PGA4-203ENST00000539581 PHF8Q9UPP1 1060 aa17.2■□□□□ 0.34
PGA4-203ENST00000539581 CCDC61Q9Y6R9 512 aa17.2■□□□□ 0.34
PGA4-203ENST00000539581 NINLQ9Y2I6 1382 aa17.19■□□□□ 0.34
PGA4-203ENST00000539581 HSPA1LP34931 641 aa17.19■□□□□ 0.34
PGA4-203ENST00000539581 TMF1P82094 1093 aa17.19■□□□□ 0.34
PGA4-203ENST00000539581 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
PGA4-203ENST00000539581 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
PGA4-203ENST00000539581 PXDNQ92626 1479 aa17.18■□□□□ 0.34
PGA4-203ENST00000539581 JCADQ9P266 1359 aa17.17■□□□□ 0.34
PGA4-203ENST00000539581 TESK2Q96S53 571 aa17.17■□□□□ 0.34
PGA4-203ENST00000539581 SOS2Q07890 1332 aaPredicted RBP17.17■□□□□ 0.34
PGA4-203ENST00000539581 PRR36Q9H6K5 1346 aa17.17■□□□□ 0.34
PGA4-203ENST00000539581 BRD4O60885 1362 aaPredicted RBP17.16■□□□□ 0.34
PGA4-203ENST00000539581 PSME1Q06323 249 aa17.16■□□□□ 0.34
PGA4-203ENST00000539581 LRRC59Q96AG4 307 aaKnown RBP17.16■□□□□ 0.34
PGA4-203ENST00000539581 POLR3AO14802 1390 aaPredicted RBP17.15■□□□□ 0.34
PGA4-203ENST00000539581 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
PGA4-203ENST00000539581 CABP2Q9NPB3 220 aa17.15■□□□□ 0.34
PGA4-203ENST00000539581 TRPM3Q9HCF6 1732 aaPredicted RBP17.14■□□□□ 0.33
PGA4-203ENST00000539581 PLEKHG3A1L390 1219 aa17.14■□□□□ 0.33
PGA4-203ENST00000539581 FOXO3O43524 673 aa17.14■□□□□ 0.33
PGA4-203ENST00000539581 NGDNQ8NEJ9 315 aaKnown RBP17.14■□□□□ 0.33
PGA4-203ENST00000539581 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
PGA4-203ENST00000539581 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
PGA4-203ENST00000539581 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
PGA4-203ENST00000539581 ARHGEF10O15013 1369 aa17.12■□□□□ 0.33
PGA4-203ENST00000539581 MON2Q7Z3U7 1717 aa17.11■□□□□ 0.33
PGA4-203ENST00000539581 HSPA5P11021 654 aaKnown RBP17.11■□□□□ 0.33
PGA4-203ENST00000539581 PMFBP1Q8TBY8 1022 aa17.11■□□□□ 0.33
PGA4-203ENST00000539581 SPATA31A6Q5VVP1 1343 aa17.11■□□□□ 0.33
PGA4-203ENST00000539581 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
PGA4-203ENST00000539581 KRT28Q7Z3Y7 464 aa17.1■□□□□ 0.33
PGA4-203ENST00000539581 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
PGA4-203ENST00000539581 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
PGA4-203ENST00000539581 ACEP12821 1306 aa17.09■□□□□ 0.33
PGA4-203ENST00000539581 NRKQ7Z2Y5 1582 aa17.08■□□□□ 0.32
PGA4-203ENST00000539581 PNPLA6Q8IY17 1366 aa17.08■□□□□ 0.32
PGA4-203ENST00000539581 MYOM1P52179 1685 aa17.07■□□□□ 0.32
PGA4-203ENST00000539581 MED1Q15648 1581 aaPredicted RBP17.07■□□□□ 0.32
PGA4-203ENST00000539581 USP6P35125 1406 aa17.07■□□□□ 0.32
PGA4-203ENST00000539581 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
PGA4-203ENST00000539581 DDX17Q92841 729 aaKnown RBP17.07■□□□□ 0.32
PGA4-203ENST00000539581 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
PGA4-203ENST00000539581 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
PGA4-203ENST00000539581 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
PGA4-203ENST00000539581 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
PGA4-203ENST00000539581 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms