RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PCMTD1Q96MG8 357 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-207ENST00000539563 TOP2BQ02880 1626 aa7.86□□□□□ -1.15
LSAMP-207ENST00000539563 SMG6Q86US8 1419 aaKnown RBP7.86□□□□□ -1.15
LSAMP-207ENST00000539563 SETQ01105 290 aaPredicted RBP7.86□□□□□ -1.15
LSAMP-207ENST00000539563 CNTROBQ8N137 903 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 WASHC2AQ641Q2 1341 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 HFM1A2PYH4 1435 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 PSMA5P28066 241 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 CCDC30Q5VVM6 783 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 RSPH6AQ9H0K4 717 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 ANO8Q9HCE9 1232 aaPredicted RBP7.85□□□□□ -1.15
LSAMP-207ENST00000539563 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.85□□□□□ -1.15
LSAMP-207ENST00000539563 GAS2L2Q8NHY3 880 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 BICD2Q8TD16 824 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 SYTL4Q96C24 671 aaPredicted RBP7.85□□□□□ -1.15
LSAMP-207ENST00000539563 HIP1O00291 1037 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 KIF7Q2M1P5 1343 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 XBP1P17861 261 aa7.85□□□□□ -1.15
LSAMP-207ENST00000539563 RBM33Q96EV2 1170 aaKnown RBP7.85□□□□□ -1.15
LSAMP-207ENST00000539563 FOXD4L6Q3SYB3 417 aaPredicted RBP7.84□□□□□ -1.15
LSAMP-207ENST00000539563 FOXD4L3Q6VB84 417 aaPredicted RBP7.84□□□□□ -1.15
LSAMP-207ENST00000539563 RALYLQ86SE5 291 aaKnown RBP7.84□□□□□ -1.15
LSAMP-207ENST00000539563 BRMS1Q9HCU9 246 aa7.84□□□□□ -1.15
LSAMP-207ENST00000539563 GPRASP1Q5JY77 1395 aa7.84□□□□□ -1.15
LSAMP-207ENST00000539563 UBTFL1P0CB47 393 aaPredicted RBP7.84□□□□□ -1.15
LSAMP-207ENST00000539563 HMOX1P09601 288 aa7.84□□□□□ -1.15
LSAMP-207ENST00000539563 CUL7Q14999 1698 aa7.84□□□□□ -1.16
LSAMP-207ENST00000539563 ARID3AQ99856 593 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 MRC2Q9UBG0 1479 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 SYNJ1O43426 1573 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 MCM2P49736 904 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 LETM1O95202 739 aaPredicted RBP7.83□□□□□ -1.16
LSAMP-207ENST00000539563 CCAR2Q8N163 923 aaKnown RBP7.83□□□□□ -1.16
LSAMP-207ENST00000539563 C22orf23Q9BZE7 217 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 GNAI3P08754 354 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 PDE4CQ08493 712 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 AQRO60306 1485 aaKnown RBP eCLIP7.83□□□□□ -1.16
LSAMP-207ENST00000539563 KIF6Q6ZMV9 814 aa7.83□□□□□ -1.16
LSAMP-207ENST00000539563 NAT10Q9H0A0 1025 aaKnown RBP7.83□□□□□ -1.16
LSAMP-207ENST00000539563 DHX16O60231 1041 aaKnown RBP7.83□□□□□ -1.16
LSAMP-207ENST00000539563 RAD21O60216 631 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 CDC45O75419 566 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 ERC1Q8IUD2 1116 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 CCDC43Q96MW1 224 aaKnown RBP7.82□□□□□ -1.16
LSAMP-207ENST00000539563 LNPKQ9C0E8 428 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 IFT140Q96RY7 1462 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 PLEKHO1Q53GL0 409 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-207ENST00000539563 HSP90AA2PQ14568 343 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-207ENST00000539563 CCDC73Q6ZRK6 1079 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 CABP2Q9NPB3 220 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 ZNF644Q9H582 1327 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-207ENST00000539563 OLFM4Q6UX06 510 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 CLASRPQ8N2M8 674 aaKnown RBP7.82□□□□□ -1.16
LSAMP-207ENST00000539563 KIAA1107Q9UPP5 1409 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 FBXW7Q969H0 707 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 C9orf84Q5VXU9 1444 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 TIAM1Q13009 1591 aa7.82□□□□□ -1.16
LSAMP-207ENST00000539563 MTHFSP49914 203 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 ZNF692Q9BU19 519 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-207ENST00000539563 TEX35Q5T0J7 233 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 CC2D2AQ9P2K1 1620 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 VPS37CA5D8V6 355 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-207ENST00000539563 SLC4A3P48751 1232 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 HOMER1Q86YM7 354 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 GGNBP2Q9H3C7 697 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 ABTB2Q8N961 1025 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 TBC1D2BQ9UPU7 963 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 NLRP6P59044 892 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 NEUROD6Q96NK8 337 aa7.81□□□□□ -1.16
LSAMP-207ENST00000539563 SART3Q15020 963 aaKnown RBP7.8□□□□□ -1.16
LSAMP-207ENST00000539563 WASHC4Q2M389 1173 aa7.8□□□□□ -1.16
LSAMP-207ENST00000539563 DNMBPQ6XZF7 1577 aa7.8□□□□□ -1.16
LSAMP-207ENST00000539563 SLC3A2P08195 630 aaKnown RBP7.8□□□□□ -1.16
LSAMP-207ENST00000539563 AIMP1Q12904 312 aaKnown RBP7.8□□□□□ -1.16
LSAMP-207ENST00000539563 CT47B1P0C2W7 299 aaPredicted RBP7.8□□□□□ -1.16
LSAMP-207ENST00000539563 CCDC27Q2M243 656 aa7.8□□□□□ -1.16
LSAMP-207ENST00000539563 ZNF592Q92610 1267 aa7.8□□□□□ -1.16
LSAMP-207ENST00000539563 GCC1Q96CN9 775 aa7.8□□□□□ -1.16
LSAMP-207ENST00000539563 CFTRP13569 1480 aa7.8□□□□□ -1.16
LSAMP-207ENST00000539563 HMGXB3Q12766 1538 aa7.8□□□□□ -1.16
LSAMP-207ENST00000539563 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.8□□□□□ -1.16
LSAMP-207ENST00000539563 PNISRQ8TF01 805 aaKnown RBP7.8□□□□□ -1.16
LSAMP-207ENST00000539563 GNAI2P04899 355 aa7.79□□□□□ -1.16
LSAMP-207ENST00000539563 CWC22Q9HCG8 908 aaKnown RBP7.79□□□□□ -1.16
LSAMP-207ENST00000539563 EPS15P42566 896 aa7.79□□□□□ -1.16
LSAMP-207ENST00000539563 AMER1Q5JTC6 1135 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-207ENST00000539563 PRG4Q92954 1404 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-207ENST00000539563 PDCP20941 246 aa7.79□□□□□ -1.16
LSAMP-207ENST00000539563 ACBD3Q9H3P7 528 aa7.79□□□□□ -1.16
LSAMP-207ENST00000539563 PDE3AQ14432 1141 aa7.79□□□□□ -1.16
LSAMP-207ENST00000539563 NLRP2Q9NX02 1062 aa7.79□□□□□ -1.16
LSAMP-207ENST00000539563 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-207ENST00000539563 CDR1P51861 262 aa7.79□□□□□ -1.16
LSAMP-207ENST00000539563 TMEM132EQ6IEE7 984 aa7.78□□□□□ -1.16
LSAMP-207ENST00000539563 PANK1Q8TE04 598 aa7.78□□□□□ -1.16
LSAMP-207ENST00000539563 AK7Q96M32 723 aa7.78□□□□□ -1.16
LSAMP-207ENST00000539563 PPP2R1AP30153 589 aa7.78□□□□□ -1.16
LSAMP-207ENST00000539563 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
LSAMP-207ENST00000539563 CCT4P50991 539 aaKnown RBP7.78□□□□□ -1.16
LSAMP-207ENST00000539563 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms