RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 BCL11AQ9H165 835 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 MED14O60244 1454 aa9.19□□□□□ -0.94
PROM1-219ENST00000539194 CNGB1Q14028 1251 aaPredicted RBP9.19□□□□□ -0.94
PROM1-219ENST00000539194 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
PROM1-219ENST00000539194 C8orf34Q49A92 452 aa9.18□□□□□ -0.94
PROM1-219ENST00000539194 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
PROM1-219ENST00000539194 NGEFQ8N5V2 710 aa9.17□□□□□ -0.94
PROM1-219ENST00000539194 KIF3BO15066 747 aa9.17□□□□□ -0.94
PROM1-219ENST00000539194 NRXN3Q9Y4C0 1643 aa9.16□□□□□ -0.94
PROM1-219ENST00000539194 RPGRIP1LQ68CZ1 1315 aa9.16□□□□□ -0.94
PROM1-219ENST00000539194 GOLGA2Q08379 1002 aa9.16□□□□□ -0.94
PROM1-219ENST00000539194 SKAP1Q86WV1 359 aa9.16□□□□□ -0.94
PROM1-219ENST00000539194 CD109Q6YHK3 1445 aa9.16□□□□□ -0.94
PROM1-219ENST00000539194 ZMYM3Q14202 1370 aa9.15□□□□□ -0.94
PROM1-219ENST00000539194 NINLQ9Y2I6 1382 aa9.15□□□□□ -0.94
PROM1-219ENST00000539194 NSD3Q9BZ95 1437 aa9.15□□□□□ -0.94
PROM1-219ENST00000539194 CENPQQ7L2Z9 268 aaPredicted RBP9.15□□□□□ -0.95
PROM1-219ENST00000539194 USP19O94966 1318 aa9.15□□□□□ -0.95
PROM1-219ENST00000539194 CCDC27Q2M243 656 aa9.14□□□□□ -0.95
PROM1-219ENST00000539194 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
PROM1-219ENST00000539194 KNDC1Q76NI1 1749 aa9.14□□□□□ -0.95
PROM1-219ENST00000539194 NSD2O96028 1365 aa9.13□□□□□ -0.95
PROM1-219ENST00000539194 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
PROM1-219ENST00000539194 CENPJQ9HC77 1338 aaPredicted RBP9.13□□□□□ -0.95
PROM1-219ENST00000539194 ARHGEF40Q8TER5 1519 aa9.13□□□□□ -0.95
PROM1-219ENST00000539194 WWC1Q8IX03 1113 aa9.13□□□□□ -0.95
PROM1-219ENST00000539194 ABCC11Q96J66 1382 aa9.13□□□□□ -0.95
PROM1-219ENST00000539194 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
PROM1-219ENST00000539194 ALKQ9UM73 1620 aa9.12□□□□□ -0.95
PROM1-219ENST00000539194 E9PSI1 815 aa9.12□□□□□ -0.95
PROM1-219ENST00000539194 MON2Q7Z3U7 1717 aa9.12□□□□□ -0.95
PROM1-219ENST00000539194 APAF1O14727 1248 aa9.11□□□□□ -0.95
PROM1-219ENST00000539194 ANP32AP39687 249 aaKnown RBP9.11□□□□□ -0.95
PROM1-219ENST00000539194 PNPLA6Q8IY17 1366 aa9.11□□□□□ -0.95
PROM1-219ENST00000539194 SPATA31D1Q6ZQQ2 1576 aa9.11□□□□□ -0.95
PROM1-219ENST00000539194 AKAP12Q02952 1782 aa9.11□□□□□ -0.95
PROM1-219ENST00000539194 DEKP35659 375 aaKnown RBP9.11□□□□□ -0.95
PROM1-219ENST00000539194 AGLP35573 1532 aa9.11□□□□□ -0.95
PROM1-219ENST00000539194 PDE3AQ14432 1141 aa9.1□□□□□ -0.95
PROM1-219ENST00000539194 BCAR3O75815 825 aa9.1□□□□□ -0.95
PROM1-219ENST00000539194 IGHDP01880 384 aa9.1□□□□□ -0.95
PROM1-219ENST00000539194 WDR43Q15061 677 aaKnown RBP eCLIP9.1□□□□□ -0.95
PROM1-219ENST00000539194 PLEKHF1Q96S99 279 aa9.1□□□□□ -0.95
PROM1-219ENST00000539194 DLG5Q8TDM6 1919 aa9.1□□□□□ -0.95
PROM1-219ENST00000539194 NRKQ7Z2Y5 1582 aa9.09□□□□□ -0.95
PROM1-219ENST00000539194 CCDC146Q8IYE0 955 aa9.09□□□□□ -0.95
PROM1-219ENST00000539194 DIP2BQ9P265 1576 aa9.09□□□□□ -0.95
PROM1-219ENST00000539194 YEATS2Q9ULM3 1422 aa9.09□□□□□ -0.95
PROM1-219ENST00000539194 USP35Q9P2H5 1018 aa9.09□□□□□ -0.95
PROM1-219ENST00000539194 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
PROM1-219ENST00000539194 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
PROM1-219ENST00000539194 C3P01024 1663 aa9.08□□□□□ -0.96
PROM1-219ENST00000539194 TOPAZ1Q8N9V7 1692 aa9.08□□□□□ -0.96
PROM1-219ENST00000539194 WDR63Q8IWG1 891 aa9.07□□□□□ -0.96
PROM1-219ENST00000539194 SLC12A5Q9H2X9 1139 aa9.07□□□□□ -0.96
PROM1-219ENST00000539194 A0A1W2PP64 1363 aa9.07□□□□□ -0.96
PROM1-219ENST00000539194 RARSP54136 660 aaKnown RBP9.07□□□□□ -0.96
PROM1-219ENST00000539194 NALCNQ8IZF0 1738 aa9.07□□□□□ -0.96
PROM1-219ENST00000539194 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
PROM1-219ENST00000539194 PPIP5K1Q6PFW1 1433 aa9.06□□□□□ -0.96
PROM1-219ENST00000539194 RGPD1P0DJD0 1748 aa9.06□□□□□ -0.96
PROM1-219ENST00000539194 YTHDC2Q9H6S0 1430 aaKnown RBP9.06□□□□□ -0.96
PROM1-219ENST00000539194 LRRC7Q96NW7 1537 aa9.06□□□□□ -0.96
PROM1-219ENST00000539194 RUNDC1Q96C34 613 aa9.05□□□□□ -0.96
PROM1-219ENST00000539194 AAMPQ13685 434 aa9.05□□□□□ -0.96
PROM1-219ENST00000539194 CGNL1Q0VF96 1302 aa9.05□□□□□ -0.96
PROM1-219ENST00000539194 RLBP1P12271 317 aa9.05□□□□□ -0.96
PROM1-219ENST00000539194 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
PROM1-219ENST00000539194 TMEM132EQ6IEE7 984 aa9.04□□□□□ -0.96
PROM1-219ENST00000539194 ATP7BP35670 1465 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 TCP11L2Q8N4U5 519 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.03□□□□□ -0.96
PROM1-219ENST00000539194 TRAK1Q9UPV9 953 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 CPS1P31327 1500 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 A2ML1A8K2U0 1454 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 KIF13AQ9H1H9 1805 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 CPSF1Q10570 1443 aaKnown RBP9.03□□□□□ -0.96
PROM1-219ENST00000539194 FAM135BQ49AJ0 1406 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 IDI1Q13907 227 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 CLUAP1Q96AJ1 413 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 TRIM35Q9UPQ4 493 aa9.03□□□□□ -0.96
PROM1-219ENST00000539194 TUBGCP6Q96RT7 1819 aa9.02□□□□□ -0.97
PROM1-219ENST00000539194 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
PROM1-219ENST00000539194 MTHFSP49914 203 aa9.02□□□□□ -0.97
PROM1-219ENST00000539194 NBR1Q14596 966 aa9.02□□□□□ -0.97
PROM1-219ENST00000539194 SEC24BO95487 1268 aa9.02□□□□□ -0.97
PROM1-219ENST00000539194 TNNQ9UQP3 1299 aa9.02□□□□□ -0.97
PROM1-219ENST00000539194 EVC2Q86UK5 1308 aa9.01□□□□□ -0.97
PROM1-219ENST00000539194 DDRGK1Q96HY6 314 aa9.01□□□□□ -0.97
PROM1-219ENST00000539194 TECPR2O15040 1411 aa9.01□□□□□ -0.97
PROM1-219ENST00000539194 ITSN1Q15811 1721 aa9.01□□□□□ -0.97
PROM1-219ENST00000539194 UBR1Q8IWV7 1749 aa9.01□□□□□ -0.97
PROM1-219ENST00000539194 SLC52A1Q9NWF4 448 aa9.01□□□□□ -0.97
PROM1-219ENST00000539194 MARF1Q9Y4F3 1742 aaKnown RBP9.01□□□□□ -0.97
PROM1-219ENST00000539194 USP54Q70EL1 1684 aa9□□□□□ -0.97
PROM1-219ENST00000539194 VGFO15240 615 aaPredicted RBP9□□□□□ -0.97
PROM1-219ENST00000539194 CT47B1P0C2W7 299 aaPredicted RBP9□□□□□ -0.97
PROM1-219ENST00000539194 RIMS1Q86UR5 1692 aaKnown RBP9□□□□□ -0.97
PROM1-219ENST00000539194 IL16Q14005 1332 aa9□□□□□ -0.97
PROM1-219ENST00000539194 N4BP2Q86UW6 1770 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms