RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
USP30-210ENST00000539121 QTRT2Q9H974 415 aaKnown RBP9.44□□□□□ -0.9
USP30-210ENST00000539121 SOS2Q07890 1332 aaPredicted RBP9.44□□□□□ -0.9
USP30-210ENST00000539121 LAMC1P11047 1609 aa9.44□□□□□ -0.9
USP30-210ENST00000539121 NALCNQ8IZF0 1738 aa9.43□□□□□ -0.9
USP30-210ENST00000539121 NGLY1Q96IV0 654 aa9.43□□□□□ -0.9
USP30-210ENST00000539121 C8orf37Q96NL8 207 aa9.43□□□□□ -0.9
USP30-210ENST00000539121 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
USP30-210ENST00000539121 ROBO2Q9HCK4 1378 aa9.42□□□□□ -0.9
USP30-210ENST00000539121 DDX17Q92841 729 aaKnown RBP9.42□□□□□ -0.9
USP30-210ENST00000539121 C1QBPQ07021 282 aaKnown RBP9.41□□□□□ -0.9
USP30-210ENST00000539121 PPARGC1BQ86YN6 1023 aaKnown RBP9.41□□□□□ -0.9
USP30-210ENST00000539121 FNBP4Q8N3X1 1017 aaPredicted RBP9.41□□□□□ -0.9
USP30-210ENST00000539121 ORAI2Q96SN7 254 aa9.4□□□□□ -0.9
USP30-210ENST00000539121 TRPC5Q9UL62 973 aaPredicted RBP9.4□□□□□ -0.9
USP30-210ENST00000539121 RGS12O14924 1447 aa9.39□□□□□ -0.91
USP30-210ENST00000539121 NPHP3Q7Z494 1330 aa9.39□□□□□ -0.91
USP30-210ENST00000539121 ADAMTS2O95450 1211 aa9.39□□□□□ -0.91
USP30-210ENST00000539121 USP21Q9UK80 565 aa9.39□□□□□ -0.91
USP30-210ENST00000539121 PPLO60437 1756 aa9.38□□□□□ -0.91
USP30-210ENST00000539121 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
USP30-210ENST00000539121 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
USP30-210ENST00000539121 ESCO1Q5FWF5 840 aa9.37□□□□□ -0.91
USP30-210ENST00000539121 COL22A1Q8NFW1 1626 aaPredicted RBP9.37□□□□□ -0.91
USP30-210ENST00000539121 TECPR2O15040 1411 aa9.37□□□□□ -0.91
USP30-210ENST00000539121 CDC42BPGQ6DT37 1551 aa9.37□□□□□ -0.91
USP30-210ENST00000539121 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
USP30-210ENST00000539121 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
USP30-210ENST00000539121 MYOM2P54296 1465 aa9.36□□□□□ -0.91
USP30-210ENST00000539121 ATRNO75882 1429 aa9.36□□□□□ -0.91
USP30-210ENST00000539121 ABCC11Q96J66 1382 aa9.36□□□□□ -0.91
USP30-210ENST00000539121 CCDC144AA2RUR9 1427 aa9.35□□□□□ -0.91
USP30-210ENST00000539121 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
USP30-210ENST00000539121 SIRT1Q96EB6 747 aa9.35□□□□□ -0.91
USP30-210ENST00000539121 PXDNQ92626 1479 aa9.34□□□□□ -0.91
USP30-210ENST00000539121 ADGRF5Q8IZF2 1346 aa9.34□□□□□ -0.91
USP30-210ENST00000539121 SPATA31E1Q6ZUB1 1445 aa9.34□□□□□ -0.91
USP30-210ENST00000539121 FOXO3O43524 673 aa9.34□□□□□ -0.91
USP30-210ENST00000539121 SLC4A2P04920 1241 aa9.34□□□□□ -0.91
USP30-210ENST00000539121 BCL9LQ86UU0 1499 aa9.34□□□□□ -0.91
USP30-210ENST00000539121 WAPLQ7Z5K2 1190 aa9.33□□□□□ -0.92
USP30-210ENST00000539121 GJD4Q96KN9 370 aaPredicted RBP9.33□□□□□ -0.92
USP30-210ENST00000539121 MARF1Q9Y4F3 1742 aaKnown RBP9.32□□□□□ -0.92
USP30-210ENST00000539121 RGL3Q3MIN7 710 aa9.32□□□□□ -0.92
USP30-210ENST00000539121 MPHOSPH9Q99550 1183 aa9.32□□□□□ -0.92
USP30-210ENST00000539121 STK26Q9P289 416 aa9.32□□□□□ -0.92
USP30-210ENST00000539121 PIK3C2GO75747 1445 aa9.31□□□□□ -0.92
USP30-210ENST00000539121 KNDC1Q76NI1 1749 aa9.31□□□□□ -0.92
USP30-210ENST00000539121 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
USP30-210ENST00000539121 U3KPZ7 1027 aaPredicted RBP9.31□□□□□ -0.92
USP30-210ENST00000539121 IFT172Q9UG01 1749 aa9.31□□□□□ -0.92
USP30-210ENST00000539121 SPATA31A3Q5VYP0 1347 aa9.31□□□□□ -0.92
USP30-210ENST00000539121 TMEM132EQ6IEE7 984 aa9.3□□□□□ -0.92
USP30-210ENST00000539121 C14orf93Q9H972 538 aaKnown RBP9.3□□□□□ -0.92
USP30-210ENST00000539121 ZRANB1Q9UGI0 708 aa9.3□□□□□ -0.92
USP30-210ENST00000539121 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.3□□□□□ -0.92
USP30-210ENST00000539121 YTHDC2Q9H6S0 1430 aaKnown RBP9.3□□□□□ -0.92
USP30-210ENST00000539121 KIF1AQ12756 1690 aa9.29□□□□□ -0.92
USP30-210ENST00000539121 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
USP30-210ENST00000539121 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
USP30-210ENST00000539121 PSME1Q06323 249 aa9.29□□□□□ -0.92
USP30-210ENST00000539121 KRT28Q7Z3Y7 464 aa9.29□□□□□ -0.92
USP30-210ENST00000539121 SLIT2O94813 1529 aa9.29□□□□□ -0.92
USP30-210ENST00000539121 FMN2Q9NZ56 1722 aa9.28□□□□□ -0.92
USP30-210ENST00000539121 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
USP30-210ENST00000539121 PLEKHH1Q9ULM0 1364 aa9.28□□□□□ -0.92
USP30-210ENST00000539121 SBNO1A3KN83 1393 aa9.27□□□□□ -0.93
USP30-210ENST00000539121 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.93
USP30-210ENST00000539121 FOXD4L1Q9NU39 408 aa9.27□□□□□ -0.93
USP30-210ENST00000539121 PHF8Q9UPP1 1060 aa9.27□□□□□ -0.93
USP30-210ENST00000539121 RALGAPBQ86X10 1494 aa9.27□□□□□ -0.93
USP30-210ENST00000539121 NRXN1Q9ULB1 1477 aa9.27□□□□□ -0.93
USP30-210ENST00000539121 TNS3Q68CZ2 1445 aa9.26□□□□□ -0.93
USP30-210ENST00000539121 VPS72Q15906 364 aa9.26□□□□□ -0.93
USP30-210ENST00000539121 USP32Q8NFA0 1604 aa9.26□□□□□ -0.93
USP30-210ENST00000539121 ARHGEF10O15013 1369 aa9.25□□□□□ -0.93
USP30-210ENST00000539121 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
USP30-210ENST00000539121 HAP1P54257 671 aaPredicted RBP9.25□□□□□ -0.93
USP30-210ENST00000539121 CFAP70Q5T0N1 1121 aa9.25□□□□□ -0.93
USP30-210ENST00000539121 NWD2Q9ULI1 1742 aa9.25□□□□□ -0.93
USP30-210ENST00000539121 GLI3P10071 1580 aa9.24□□□□□ -0.93
USP30-210ENST00000539121 RGPD8O14715 1765 aaPredicted RBP9.24□□□□□ -0.93
USP30-210ENST00000539121 ANKARQ7Z5J8 1434 aa9.24□□□□□ -0.93
USP30-210ENST00000539121 HRCP23327 699 aa9.24□□□□□ -0.93
USP30-210ENST00000539121 STAC3Q96MF2 364 aa9.24□□□□□ -0.93
USP30-210ENST00000539121 PRAM1Q96QH2 718 aa9.24□□□□□ -0.93
USP30-210ENST00000539121 DLC1Q96QB1 1528 aa9.23□□□□□ -0.93
USP30-210ENST00000539121 MYCNP04198 464 aaPredicted RBP9.23□□□□□ -0.93
USP30-210ENST00000539121 SF3B2Q13435 895 aaKnown RBP9.23□□□□□ -0.93
USP30-210ENST00000539121 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
USP30-210ENST00000539121 POGKQ9P215 609 aa9.23□□□□□ -0.93
USP30-210ENST00000539121 BRWD3Q6RI45 1802 aa9.22□□□□□ -0.93
USP30-210ENST00000539121 FAM83GA6ND36 823 aa9.22□□□□□ -0.93
USP30-210ENST00000539121 SAMD1Q6SPF0 538 aaPredicted RBP9.22□□□□□ -0.93
USP30-210ENST00000539121 CABLES1Q8TDN4 633 aa9.22□□□□□ -0.93
USP30-210ENST00000539121 EIF3AQ14152 1382 aaKnown RBP9.22□□□□□ -0.93
USP30-210ENST00000539121 ADGRB2O60241 1585 aa9.21□□□□□ -0.93
USP30-210ENST00000539121 CAPN15O75808 1086 aa9.21□□□□□ -0.94
USP30-210ENST00000539121 LMOD2Q6P5Q4 547 aa9.21□□□□□ -0.94
USP30-210ENST00000539121 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms