RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TRPM1Q7Z4N2 1603 aa19.93■□□□□ 0.78
CD9-208ENST00000538834 ADGRB2O60241 1585 aa19.92■□□□□ 0.78
CD9-208ENST00000538834 WAPLQ7Z5K2 1190 aa19.92■□□□□ 0.78
CD9-208ENST00000538834 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
CD9-208ENST00000538834 C1orf167Q5SNV9 1468 aa19.92■□□□□ 0.78
CD9-208ENST00000538834 C14orf37Q86TY3 774 aa19.91■□□□□ 0.78
CD9-208ENST00000538834 STK26Q9P289 416 aa19.91■□□□□ 0.78
CD9-208ENST00000538834 BRINP3Q76B58 766 aa19.9■□□□□ 0.78
CD9-208ENST00000538834 SHPRHQ149N8 1683 aa19.86■□□□□ 0.77
CD9-208ENST00000538834 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
CD9-208ENST00000538834 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
CD9-208ENST00000538834 MED1Q15648 1581 aaPredicted RBP19.83■□□□□ 0.77
CD9-208ENST00000538834 PRAM1Q96QH2 718 aa19.83■□□□□ 0.77
CD9-208ENST00000538834 NEUROD1Q13562 356 aa19.82■□□□□ 0.76
CD9-208ENST00000538834 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
CD9-208ENST00000538834 TRAK1Q9UPV9 953 aa19.81■□□□□ 0.76
CD9-208ENST00000538834 KIF1AQ12756 1690 aa19.8■□□□□ 0.76
CD9-208ENST00000538834 GPRASP1Q5JY77 1395 aa19.8■□□□□ 0.76
CD9-208ENST00000538834 CLSPNQ9HAW4 1339 aa19.79■□□□□ 0.76
CD9-208ENST00000538834 NBPF8Q3BBV2 869 aa19.79■□□□□ 0.76
CD9-208ENST00000538834 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
CD9-208ENST00000538834 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
CD9-208ENST00000538834 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
CD9-208ENST00000538834 QRICH2Q9H0J4 1663 aa19.76■□□□□ 0.75
CD9-208ENST00000538834 JCADQ9P266 1359 aa19.76■□□□□ 0.75
CD9-208ENST00000538834 PXDNQ92626 1479 aa19.75■□□□□ 0.75
CD9-208ENST00000538834 ITSN1Q15811 1721 aa19.74■□□□□ 0.75
CD9-208ENST00000538834 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
CD9-208ENST00000538834 POGKQ9P215 609 aa19.74■□□□□ 0.75
CD9-208ENST00000538834 TULP4Q9NRJ4 1543 aa19.74■□□□□ 0.75
CD9-208ENST00000538834 TOPAZ1Q8N9V7 1692 aa19.74■□□□□ 0.75
CD9-208ENST00000538834 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
CD9-208ENST00000538834 SAFB2Q14151 953 aaKnown RBP eCLIP19.72■□□□□ 0.75
CD9-208ENST00000538834 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
CD9-208ENST00000538834 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
CD9-208ENST00000538834 WASLO00401 505 aaPredicted RBP19.71■□□□□ 0.75
CD9-208ENST00000538834 PRR36Q9H6K5 1346 aa19.71■□□□□ 0.75
CD9-208ENST00000538834 TRPM3Q9HCF6 1732 aaPredicted RBP19.7■□□□□ 0.74
CD9-208ENST00000538834 ATP7BP35670 1465 aa19.69■□□□□ 0.74
CD9-208ENST00000538834 ESCO1Q5FWF5 840 aa19.69■□□□□ 0.74
CD9-208ENST00000538834 LRRC59Q96AG4 307 aaKnown RBP19.69■□□□□ 0.74
CD9-208ENST00000538834 TIMELESSQ9UNS1 1208 aa19.69■□□□□ 0.74
CD9-208ENST00000538834 SPATA31A6Q5VVP1 1343 aa19.69■□□□□ 0.74
CD9-208ENST00000538834 MINK1Q8N4C8 1332 aaPredicted RBP19.69■□□□□ 0.74
CD9-208ENST00000538834 LRP6O75581 1613 aa19.69■□□□□ 0.74
CD9-208ENST00000538834 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
CD9-208ENST00000538834 NPHP3Q7Z494 1330 aa19.68■□□□□ 0.74
CD9-208ENST00000538834 HIRIP3Q9BW71 556 aaPredicted RBP19.67■□□□□ 0.74
CD9-208ENST00000538834 ROCK2O75116 1388 aaKnown RBP19.67■□□□□ 0.74
CD9-208ENST00000538834 EIF3AQ14152 1382 aaKnown RBP19.67■□□□□ 0.74
CD9-208ENST00000538834 MARF1Q9Y4F3 1742 aaKnown RBP19.66■□□□□ 0.74
CD9-208ENST00000538834 NUTM2FA1L443 756 aa19.66■□□□□ 0.74
CD9-208ENST00000538834 CENPJQ9HC77 1338 aaPredicted RBP19.66■□□□□ 0.74
CD9-208ENST00000538834 DISP3Q9P2K9 1392 aa19.66■□□□□ 0.74
CD9-208ENST00000538834 FOXO3O43524 673 aa19.65■□□□□ 0.74
CD9-208ENST00000538834 RGS17Q9UGC6 210 aaPredicted RBP19.65■□□□□ 0.74
CD9-208ENST00000538834 PHF8Q9UPP1 1060 aa19.65■□□□□ 0.74
CD9-208ENST00000538834 ALS2Q96Q42 1657 aa19.65■□□□□ 0.74
CD9-208ENST00000538834 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.73
CD9-208ENST00000538834 CDK19Q9BWU1 502 aa19.62■□□□□ 0.73
CD9-208ENST00000538834 CRYBG1Q9Y4K1 1723 aa19.61■□□□□ 0.73
CD9-208ENST00000538834 ABCA3Q99758 1704 aa19.6■□□□□ 0.73
CD9-208ENST00000538834 SPATA31A3Q5VYP0 1347 aa19.6■□□□□ 0.73
CD9-208ENST00000538834 NUDT16Q96DE0 195 aaKnown RBP19.6■□□□□ 0.73
CD9-208ENST00000538834 SBNO1A3KN83 1393 aa19.59■□□□□ 0.73
CD9-208ENST00000538834 POLR3AO14802 1390 aaPredicted RBP19.59■□□□□ 0.73
CD9-208ENST00000538834 PLEKHG3A1L390 1219 aa19.58■□□□□ 0.72
CD9-208ENST00000538834 KRT28Q7Z3Y7 464 aa19.58■□□□□ 0.72
CD9-208ENST00000538834 ILDR2Q71H61 639 aa19.57■□□□□ 0.72
CD9-208ENST00000538834 AKAP12Q02952 1782 aa19.57■□□□□ 0.72
CD9-208ENST00000538834 CARD11Q9BXL7 1154 aa19.56■□□□□ 0.72
CD9-208ENST00000538834 CCDC61Q9Y6R9 512 aa19.56■□□□□ 0.72
CD9-208ENST00000538834 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
CD9-208ENST00000538834 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
CD9-208ENST00000538834 XPCQ01831 940 aaPredicted RBP19.54■□□□□ 0.72
CD9-208ENST00000538834 PSME1Q06323 249 aa19.52■□□□□ 0.72
CD9-208ENST00000538834 TESK2Q96S53 571 aa19.51■□□□□ 0.71
CD9-208ENST00000538834 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
CD9-208ENST00000538834 CABP2Q9NPB3 220 aa19.5■□□□□ 0.71
CD9-208ENST00000538834 PPIP5K1Q6PFW1 1433 aa19.5■□□□□ 0.71
CD9-208ENST00000538834 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.49■□□□□ 0.71
CD9-208ENST00000538834 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
CD9-208ENST00000538834 PUS7Q96PZ0 661 aaKnown RBP19.49■□□□□ 0.71
CD9-208ENST00000538834 SSH2Q76I76 1423 aa19.49■□□□□ 0.71
CD9-208ENST00000538834 ACEP12821 1306 aa19.49■□□□□ 0.71
CD9-208ENST00000538834 MON2Q7Z3U7 1717 aa19.48■□□□□ 0.71
CD9-208ENST00000538834 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
CD9-208ENST00000538834 POTEAQ6S8J7 498 aa19.48■□□□□ 0.71
CD9-208ENST00000538834 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
CD9-208ENST00000538834 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
CD9-208ENST00000538834 NUTM2BA6NNL0 878 aaPredicted RBP19.46■□□□□ 0.71
CD9-208ENST00000538834 NUTM2EB1AL46 878 aaPredicted RBP19.46■□□□□ 0.71
CD9-208ENST00000538834 SRPK2P78362 688 aaKnown RBP19.46■□□□□ 0.71
CD9-208ENST00000538834 NUTM2AQ8IVF1 878 aaPredicted RBP19.46■□□□□ 0.71
CD9-208ENST00000538834 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
CD9-208ENST00000538834 PHRF1Q9P1Y6 1649 aaKnown RBP19.46■□□□□ 0.71
CD9-208ENST00000538834 NWD2Q9ULI1 1742 aa19.45■□□□□ 0.7
CD9-208ENST00000538834 CPSF1Q10570 1443 aaKnown RBP19.45■□□□□ 0.7
CD9-208ENST00000538834 FNBP4Q8N3X1 1017 aaPredicted RBP19.45■□□□□ 0.7
CD9-208ENST00000538834 NGDNQ8NEJ9 315 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms