RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 TECPR2O15040 1411 aa29.88■■■□□ 2.37
MSRB3-208ENST00000538725 HRCP23327 699 aa29.87■■■□□ 2.37
MSRB3-208ENST00000538725 C14orf93Q9H972 538 aaKnown RBP29.87■■■□□ 2.37
MSRB3-208ENST00000538725 LAMC1P11047 1609 aa29.83■■■□□ 2.37
MSRB3-208ENST00000538725 SOS2Q07890 1332 aaPredicted RBP29.83■■■□□ 2.37
MSRB3-208ENST00000538725 YTHDC2Q9H6S0 1430 aaKnown RBP29.82■■■□□ 2.36
MSRB3-208ENST00000538725 SIRT1Q96EB6 747 aa29.82■■■□□ 2.36
MSRB3-208ENST00000538725 PNPLA6Q8IY17 1366 aa29.81■■■□□ 2.36
MSRB3-208ENST00000538725 ESCO1Q5FWF5 840 aa29.81■■■□□ 2.36
MSRB3-208ENST00000538725 CFAP70Q5T0N1 1121 aa29.81■■■□□ 2.36
MSRB3-208ENST00000538725 CDC42BPGQ6DT37 1551 aa29.81■■■□□ 2.36
MSRB3-208ENST00000538725 NRXN1Q9ULB1 1477 aa29.8■■■□□ 2.36
MSRB3-208ENST00000538725 KNDC1Q76NI1 1749 aa29.8■■■□□ 2.36
MSRB3-208ENST00000538725 MYOM2P54296 1465 aa29.8■■■□□ 2.36
MSRB3-208ENST00000538725 DHX57Q6P158 1386 aaKnown RBP29.78■■■□□ 2.36
MSRB3-208ENST00000538725 PLEKHH1Q9ULM0 1364 aa29.77■■■□□ 2.36
MSRB3-208ENST00000538725 NPHP3Q7Z494 1330 aa29.74■■■□□ 2.35
MSRB3-208ENST00000538725 AFF2P51816 1311 aa29.73■■■□□ 2.35
MSRB3-208ENST00000538725 NUTM2FA1L443 756 aa29.73■■■□□ 2.35
MSRB3-208ENST00000538725 FOXO3O43524 673 aa29.72■■■□□ 2.35
MSRB3-208ENST00000538725 C8orf37Q96NL8 207 aa29.72■■■□□ 2.35
MSRB3-208ENST00000538725 RXRBP28702 533 aa29.71■■■□□ 2.35
MSRB3-208ENST00000538725 ADRA2BP18089 450 aa29.69■■■□□ 2.34
MSRB3-208ENST00000538725 DCAF11Q8TEB1 546 aa29.69■■■□□ 2.34
MSRB3-208ENST00000538725 STAC3Q96MF2 364 aa29.69■■■□□ 2.34
MSRB3-208ENST00000538725 KDM2AQ9Y2K7 1162 aa29.69■■■□□ 2.34
MSRB3-208ENST00000538725 ADAMTS2O95450 1211 aa29.68■■■□□ 2.34
MSRB3-208ENST00000538725 NGLY1Q96IV0 654 aa29.66■■■□□ 2.34
MSRB3-208ENST00000538725 PRAM1Q96QH2 718 aa29.66■■■□□ 2.34
MSRB3-208ENST00000538725 FMN2Q9NZ56 1722 aa29.65■■■□□ 2.34
MSRB3-208ENST00000538725 PXDNQ92626 1479 aa29.64■■■□□ 2.34
MSRB3-208ENST00000538725 XPCQ01831 940 aaPredicted RBP29.64■■■□□ 2.34
MSRB3-208ENST00000538725 QTRT2Q9H974 415 aaKnown RBP29.64■■■□□ 2.34
MSRB3-208ENST00000538725 SAFB2Q14151 953 aaKnown RBP eCLIP29.63■■■□□ 2.33
MSRB3-208ENST00000538725 POGKQ9P215 609 aa29.63■■■□□ 2.33
MSRB3-208ENST00000538725 COL22A1Q8NFW1 1626 aaPredicted RBP29.61■■■□□ 2.33
MSRB3-208ENST00000538725 DLC1Q96QB1 1528 aa29.6■■■□□ 2.33
MSRB3-208ENST00000538725 TRAK1Q9UPV9 953 aa29.59■■■□□ 2.33
MSRB3-208ENST00000538725 ADGRB1O14514 1584 aa29.58■■■□□ 2.33
MSRB3-208ENST00000538725 CDK12Q9NYV4 1490 aaPredicted RBP29.58■■■□□ 2.33
MSRB3-208ENST00000538725 RBM6P78332 1123 aaKnown RBP29.57■■■□□ 2.32
MSRB3-208ENST00000538725 PHF8Q9UPP1 1060 aa29.57■■■□□ 2.32
MSRB3-208ENST00000538725 RGPD8O14715 1765 aaPredicted RBP29.57■■■□□ 2.32
MSRB3-208ENST00000538725 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
MSRB3-208ENST00000538725 KRT28Q7Z3Y7 464 aa29.56■■■□□ 2.32
MSRB3-208ENST00000538725 FNBP4Q8N3X1 1017 aaPredicted RBP29.55■■■□□ 2.32
MSRB3-208ENST00000538725 USP21Q9UK80 565 aa29.55■■■□□ 2.32
MSRB3-208ENST00000538725 SPATA31A3Q5VYP0 1347 aa29.53■■■□□ 2.32
MSRB3-208ENST00000538725 PSME1Q06323 249 aa29.51■■■□□ 2.31
MSRB3-208ENST00000538725 UPF1Q92900 1129 aaKnown RBP eCLIP29.5■■■□□ 2.31
MSRB3-208ENST00000538725 HIRIP3Q9BW71 556 aaPredicted RBP29.49■■■□□ 2.31
MSRB3-208ENST00000538725 TRPC5Q9UL62 973 aaPredicted RBP29.49■■■□□ 2.31
MSRB3-208ENST00000538725 ANKARQ7Z5J8 1434 aa29.47■■■□□ 2.31
MSRB3-208ENST00000538725 MINK1Q8N4C8 1332 aaPredicted RBP29.46■■■□□ 2.31
MSRB3-208ENST00000538725 ADGRB2O60241 1585 aa29.46■■■□□ 2.31
MSRB3-208ENST00000538725 MARF1Q9Y4F3 1742 aaKnown RBP29.45■■■□□ 2.31
MSRB3-208ENST00000538725 PIAS4Q8N2W9 510 aaPredicted RBP29.45■■■□□ 2.31
MSRB3-208ENST00000538725 PMFBP1Q8TBY8 1022 aa29.44■■■□□ 2.3
MSRB3-208ENST00000538725 WASLO00401 505 aaPredicted RBP29.43■■■□□ 2.3
MSRB3-208ENST00000538725 RGS12O14924 1447 aa29.43■■■□□ 2.3
MSRB3-208ENST00000538725 USP32Q8NFA0 1604 aa29.42■■■□□ 2.3
MSRB3-208ENST00000538725 SBNO1A3KN83 1393 aa29.42■■■□□ 2.3
MSRB3-208ENST00000538725 EIF3AQ14152 1382 aaKnown RBP29.41■■■□□ 2.3
MSRB3-208ENST00000538725 TNS3Q68CZ2 1445 aa29.41■■■□□ 2.3
MSRB3-208ENST00000538725 BCL9LQ86UU0 1499 aa29.41■■■□□ 2.3
MSRB3-208ENST00000538725 ATRNO75882 1429 aa29.4■■■□□ 2.3
MSRB3-208ENST00000538725 LMOD2Q6P5Q4 547 aa29.38■■■□□ 2.29
MSRB3-208ENST00000538725 HAP1P54257 671 aaPredicted RBP29.37■■■□□ 2.29
MSRB3-208ENST00000538725 PRR36Q9H6K5 1346 aa29.37■■■□□ 2.29
MSRB3-208ENST00000538725 CABLES1Q8TDN4 633 aa29.36■■■□□ 2.29
MSRB3-208ENST00000538725 ARHGEF10O15013 1369 aa29.36■■■□□ 2.29
MSRB3-208ENST00000538725 TULP4Q9NRJ4 1543 aa29.35■■■□□ 2.29
MSRB3-208ENST00000538725 ARHGEF28Q8N1W1 1705 aaKnown RBP29.35■■■□□ 2.29
MSRB3-208ENST00000538725 UNC5CLQ8IV45 518 aa29.34■■■□□ 2.29
MSRB3-208ENST00000538725 KIAA1210Q9ULL0 1709 aa29.34■■■□□ 2.29
MSRB3-208ENST00000538725 GJD4Q96KN9 370 aaPredicted RBP29.33■■■□□ 2.29
MSRB3-208ENST00000538725 GPRASP1Q5JY77 1395 aa29.33■■■□□ 2.29
MSRB3-208ENST00000538725 SLIT2O94813 1529 aa29.31■■■□□ 2.28
MSRB3-208ENST00000538725 PLEKHG5O94827 1062 aa29.31■■■□□ 2.28
MSRB3-208ENST00000538725 NBPF1Q3BBV0 1214 aa29.31■■■□□ 2.28
MSRB3-208ENST00000538725 NGDNQ8NEJ9 315 aaKnown RBP29.31■■■□□ 2.28
MSRB3-208ENST00000538725 NUDT16Q96DE0 195 aaKnown RBP29.3■■■□□ 2.28
MSRB3-208ENST00000538725 CDK19Q9BWU1 502 aa29.28■■■□□ 2.28
MSRB3-208ENST00000538725 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.28■■■□□ 2.28
MSRB3-208ENST00000538725 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
MSRB3-208ENST00000538725 ATAD2Q6PL18 1390 aa29.26■■■□□ 2.27
MSRB3-208ENST00000538725 L3MBTL2Q969R5 705 aa29.25■■■□□ 2.27
MSRB3-208ENST00000538725 SIN3AQ96ST3 1273 aa29.23■■■□□ 2.27
MSRB3-208ENST00000538725 ALS2Q96Q42 1657 aa29.22■■■□□ 2.27
MSRB3-208ENST00000538725 FAM83GA6ND36 823 aa29.22■■■□□ 2.27
MSRB3-208ENST00000538725 PAK3O75914 559 aaPredicted RBP29.22■■■□□ 2.27
MSRB3-208ENST00000538725 ITSN1Q15811 1721 aa29.22■■■□□ 2.27
MSRB3-208ENST00000538725 ABCA3Q99758 1704 aa29.22■■■□□ 2.27
MSRB3-208ENST00000538725 ATP7BP35670 1465 aa29.22■■■□□ 2.27
MSRB3-208ENST00000538725 VPS72Q15906 364 aa29.2■■■□□ 2.26
MSRB3-208ENST00000538725 CCDC61Q9Y6R9 512 aa29.2■■■□□ 2.26
MSRB3-208ENST00000538725 RALGAPBQ86X10 1494 aa29.2■■■□□ 2.26
MSRB3-208ENST00000538725 NWD2Q9ULI1 1742 aa29.18■■■□□ 2.26
MSRB3-208ENST00000538725 NEUROD1Q13562 356 aa29.17■■■□□ 2.26
MSRB3-208ENST00000538725 GLI3P10071 1580 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms