RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ADGRL3Q9HAR2 1447 aa24.25■■□□□ 1.47
CLN6-202ENST00000538696 SAFB2Q14151 953 aaKnown RBP eCLIP24.24■■□□□ 1.47
CLN6-202ENST00000538696 NCOA3Q9Y6Q9 1424 aa24.24■■□□□ 1.47
CLN6-202ENST00000538696 CDC42BPGQ6DT37 1551 aa24.23■■□□□ 1.47
CLN6-202ENST00000538696 ST20-MTHFSA0A0A6YYL1 179 aa24.22■■□□□ 1.47
CLN6-202ENST00000538696 HSPA5P11021 654 aaKnown RBP24.22■■□□□ 1.47
CLN6-202ENST00000538696 EIF4G2P78344 907 aaKnown RBP eCLIP24.22■■□□□ 1.47
CLN6-202ENST00000538696 SBNO2Q9Y2G9 1366 aa24.21■■□□□ 1.47
CLN6-202ENST00000538696 TULP4Q9NRJ4 1543 aa24.2■■□□□ 1.46
CLN6-202ENST00000538696 FMN2Q9NZ56 1722 aa24.2■■□□□ 1.46
CLN6-202ENST00000538696 MINK1Q8N4C8 1332 aaPredicted RBP24.2■■□□□ 1.46
CLN6-202ENST00000538696 TESK2Q96S53 571 aa24.17■■□□□ 1.46
CLN6-202ENST00000538696 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
CLN6-202ENST00000538696 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
CLN6-202ENST00000538696 IQSEC2Q5JU85 1478 aa24.15■■□□□ 1.46
CLN6-202ENST00000538696 DCCP43146 1447 aa24.14■■□□□ 1.46
CLN6-202ENST00000538696 MSH6P52701 1360 aa24.14■■□□□ 1.45
CLN6-202ENST00000538696 RGPD8O14715 1765 aaPredicted RBP24.12■■□□□ 1.45
CLN6-202ENST00000538696 USP32Q8NFA0 1604 aa24.12■■□□□ 1.45
CLN6-202ENST00000538696 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
CLN6-202ENST00000538696 DISP3Q9P2K9 1392 aa24.1■■□□□ 1.45
CLN6-202ENST00000538696 TOPAZ1Q8N9V7 1692 aa24.09■■□□□ 1.45
CLN6-202ENST00000538696 WASLO00401 505 aaPredicted RBP24.08■■□□□ 1.44
CLN6-202ENST00000538696 DIEXFQ68CQ4 756 aaKnown RBP24.08■■□□□ 1.44
CLN6-202ENST00000538696 CERKQ8TCT0 537 aa24.08■■□□□ 1.44
CLN6-202ENST00000538696 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
CLN6-202ENST00000538696 EVC2Q86UK5 1308 aa24.07■■□□□ 1.44
CLN6-202ENST00000538696 MST1RQ04912 1400 aa24.06■■□□□ 1.44
CLN6-202ENST00000538696 ATP7BP35670 1465 aa24.06■■□□□ 1.44
CLN6-202ENST00000538696 CDK19Q9BWU1 502 aa24.05■■□□□ 1.44
CLN6-202ENST00000538696 ANKARQ7Z5J8 1434 aa24.04■■□□□ 1.44
CLN6-202ENST00000538696 TMF1P82094 1093 aa24.04■■□□□ 1.44
CLN6-202ENST00000538696 MYOM1P52179 1685 aa24.03■■□□□ 1.44
CLN6-202ENST00000538696 ATF3P18847 181 aa24.03■■□□□ 1.44
CLN6-202ENST00000538696 PRR36Q9H6K5 1346 aa24.02■■□□□ 1.44
CLN6-202ENST00000538696 SLC24A1O60721 1099 aa24.02■■□□□ 1.44
CLN6-202ENST00000538696 CADPS2Q86UW7 1296 aa24.02■■□□□ 1.44
CLN6-202ENST00000538696 CABP2Q9NPB3 220 aa24.02■■□□□ 1.44
CLN6-202ENST00000538696 C1orf167Q5SNV9 1468 aa24.01■■□□□ 1.43
CLN6-202ENST00000538696 SRPK2P78362 688 aaKnown RBP24.01■■□□□ 1.43
CLN6-202ENST00000538696 NUTM2FA1L443 756 aa24■■□□□ 1.43
CLN6-202ENST00000538696 C11orf95C9JLR9 678 aaPredicted RBP24■■□□□ 1.43
CLN6-202ENST00000538696 KIF1AQ12756 1690 aa23.98■■□□□ 1.43
CLN6-202ENST00000538696 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
CLN6-202ENST00000538696 NUDT16Q96DE0 195 aaKnown RBP23.96■■□□□ 1.43
CLN6-202ENST00000538696 PUS7Q96PZ0 661 aaKnown RBP23.96■■□□□ 1.43
CLN6-202ENST00000538696 ROBO1Q9Y6N7 1651 aa23.95■■□□□ 1.42
CLN6-202ENST00000538696 KIF7Q2M1P5 1343 aa23.95■■□□□ 1.42
CLN6-202ENST00000538696 CDCA8Q53HL2 280 aa23.94■■□□□ 1.42
CLN6-202ENST00000538696 CCDC7Q96M83 1385 aa23.94■■□□□ 1.42
CLN6-202ENST00000538696 PPIP5K1Q6PFW1 1433 aa23.94■■□□□ 1.42
CLN6-202ENST00000538696 SLAIN2Q9P270 581 aa23.93■■□□□ 1.42
CLN6-202ENST00000538696 AKAP12Q02952 1782 aa23.93■■□□□ 1.42
CLN6-202ENST00000538696 WASHC2AQ641Q2 1341 aa23.92■■□□□ 1.42
CLN6-202ENST00000538696 NHSL1Q5SYE7 1610 aa23.9■■□□□ 1.42
CLN6-202ENST00000538696 UBAP1LF5GYI3 381 aa23.9■■□□□ 1.42
CLN6-202ENST00000538696 TOM1O60784 492 aa23.9■■□□□ 1.42
CLN6-202ENST00000538696 ORAI2Q96SN7 254 aa23.9■■□□□ 1.42
CLN6-202ENST00000538696 CCDC61Q9Y6R9 512 aa23.9■■□□□ 1.42
CLN6-202ENST00000538696 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.42
CLN6-202ENST00000538696 ESCO1Q5FWF5 840 aa23.88■■□□□ 1.41
CLN6-202ENST00000538696 MON2Q7Z3U7 1717 aa23.88■■□□□ 1.41
CLN6-202ENST00000538696 DDX10Q13206 875 aaKnown RBP23.87■■□□□ 1.41
CLN6-202ENST00000538696 BRINP3Q76B58 766 aa23.87■■□□□ 1.41
CLN6-202ENST00000538696 CD163L1Q9NR16 1453 aa23.87■■□□□ 1.41
CLN6-202ENST00000538696 NINLQ9Y2I6 1382 aa23.87■■□□□ 1.41
CLN6-202ENST00000538696 PHF8Q9UPP1 1060 aa23.86■■□□□ 1.41
CLN6-202ENST00000538696 CABP1Q9NZU7 370 aa23.85■■□□□ 1.41
CLN6-202ENST00000538696 PLEKHG3A1L390 1219 aa23.84■■□□□ 1.41
CLN6-202ENST00000538696 PMFBP1Q8TBY8 1022 aa23.84■■□□□ 1.41
CLN6-202ENST00000538696 TMC1Q8TDI8 760 aa23.84■■□□□ 1.41
CLN6-202ENST00000538696 POLR3AO14802 1390 aaPredicted RBP23.84■■□□□ 1.41
CLN6-202ENST00000538696 NRKQ7Z2Y5 1582 aa23.84■■□□□ 1.41
CLN6-202ENST00000538696 AHDC1Q5TGY3 1603 aaPredicted RBP23.84■■□□□ 1.41
CLN6-202ENST00000538696 SLC12A5Q9H2X9 1139 aa23.84■■□□□ 1.41
CLN6-202ENST00000538696 TRPM3Q9HCF6 1732 aaPredicted RBP23.82■■□□□ 1.4
CLN6-202ENST00000538696 PIP4K2BP78356 416 aa23.82■■□□□ 1.4
CLN6-202ENST00000538696 CPSF1Q10570 1443 aaKnown RBP23.81■■□□□ 1.4
CLN6-202ENST00000538696 ACEP12821 1306 aa23.81■■□□□ 1.4
CLN6-202ENST00000538696 PHLPP1O60346 1717 aa23.8■■□□□ 1.4
CLN6-202ENST00000538696 A0A1W2PP64 1363 aa23.8■■□□□ 1.4
CLN6-202ENST00000538696 ANKRD36BQ8N2N9 1353 aa23.8■■□□□ 1.4
CLN6-202ENST00000538696 PXDNQ92626 1479 aa23.79■■□□□ 1.4
CLN6-202ENST00000538696 SCAF1Q9H7N4 1312 aaKnown RBP23.78■■□□□ 1.4
CLN6-202ENST00000538696 NGDNQ8NEJ9 315 aaKnown RBP23.78■■□□□ 1.4
CLN6-202ENST00000538696 DDX17Q92841 729 aaKnown RBP23.78■■□□□ 1.4
CLN6-202ENST00000538696 USP6P35125 1406 aa23.77■■□□□ 1.4
CLN6-202ENST00000538696 MIER1Q8N108 512 aa23.77■■□□□ 1.4
CLN6-202ENST00000538696 COL16A1Q07092 1604 aaPredicted RBP23.76■■□□□ 1.39
CLN6-202ENST00000538696 FOXO3O43524 673 aa23.76■■□□□ 1.39
CLN6-202ENST00000538696 NPHP3Q7Z494 1330 aa23.75■■□□□ 1.39
CLN6-202ENST00000538696 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
CLN6-202ENST00000538696 ALS2Q96Q42 1657 aa23.74■■□□□ 1.39
CLN6-202ENST00000538696 HDGFL2Q7Z4V5 671 aaPredicted RBP23.74■■□□□ 1.39
CLN6-202ENST00000538696 TERF2IPQ9NYB0 399 aa23.74■■□□□ 1.39
CLN6-202ENST00000538696 KIF20BQ96Q89 1820 aa23.73■■□□□ 1.39
CLN6-202ENST00000538696 XPCQ01831 940 aaPredicted RBP23.73■■□□□ 1.39
CLN6-202ENST00000538696 SSH2Q76I76 1423 aa23.73■■□□□ 1.39
CLN6-202ENST00000538696 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
CLN6-202ENST00000538696 ZNF692Q9BU19 519 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms