RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 MMRN1Q13201 1228 aa18.05■□□□□ 0.48
SMCO2-204ENST00000538647 SCUBE3Q8IX30 993 aa18.05■□□□□ 0.48
SMCO2-204ENST00000538647 NUTM2BA6NNL0 878 aaPredicted RBP18.04■□□□□ 0.48
SMCO2-204ENST00000538647 NUTM2EB1AL46 878 aaPredicted RBP18.04■□□□□ 0.48
SMCO2-204ENST00000538647 C6orf229H3BNL8 230 aa18.04■□□□□ 0.48
SMCO2-204ENST00000538647 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
SMCO2-204ENST00000538647 NUTM2AQ8IVF1 878 aaPredicted RBP18.04■□□□□ 0.48
SMCO2-204ENST00000538647 SYMPKQ92797 1274 aaKnown RBP18.04■□□□□ 0.48
SMCO2-204ENST00000538647 MTMR2Q13614 643 aa18.03■□□□□ 0.48
SMCO2-204ENST00000538647 Q3C1V9 767 aa18.03■□□□□ 0.48
SMCO2-204ENST00000538647 PPP2R2DQ66LE6 453 aa18.02■□□□□ 0.48
SMCO2-204ENST00000538647 MTRQ99707 1265 aa18.02■□□□□ 0.48
SMCO2-204ENST00000538647 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
SMCO2-204ENST00000538647 RFC5P40937 340 aa18■□□□□ 0.47
SMCO2-204ENST00000538647 RNF19BQ6ZMZ0 732 aa18■□□□□ 0.47
SMCO2-204ENST00000538647 TJAP1Q5JTD0 557 aa17.97■□□□□ 0.47
SMCO2-204ENST00000538647 BRICD5Q6PL45 260 aa17.97■□□□□ 0.47
SMCO2-204ENST00000538647 THAP11Q96EK4 314 aa17.96■□□□□ 0.47
SMCO2-204ENST00000538647 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
SMCO2-204ENST00000538647 SPDYE5A6NIY4 337 aa17.95■□□□□ 0.46
SMCO2-204ENST00000538647 FMNL1O95466 1100 aaPredicted RBP17.95■□□□□ 0.46
SMCO2-204ENST00000538647 ZPR1O75312 459 aa17.94■□□□□ 0.46
SMCO2-204ENST00000538647 RETREG3Q86VR2 466 aa17.94■□□□□ 0.46
SMCO2-204ENST00000538647 IL21Q9HBE4 155 aa17.94■□□□□ 0.46
SMCO2-204ENST00000538647 ZNF516Q92618 1163 aa17.93■□□□□ 0.46
SMCO2-204ENST00000538647 CFAP99D6REC4 459 aa17.92■□□□□ 0.46
SMCO2-204ENST00000538647 TLL1O43897 1013 aa17.92■□□□□ 0.46
SMCO2-204ENST00000538647 PRR7Q8TB68 274 aa17.91■□□□□ 0.46
SMCO2-204ENST00000538647 USB1Q9BQ65 265 aaKnown RBP17.91■□□□□ 0.46
SMCO2-204ENST00000538647 SPSB2Q99619 263 aa17.9■□□□□ 0.46
SMCO2-204ENST00000538647 TMEM259Q4ZIN3 620 aa17.89■□□□□ 0.45
SMCO2-204ENST00000538647 TSC1Q92574 1164 aa17.89■□□□□ 0.45
SMCO2-204ENST00000538647 AP1G2O75843 785 aa17.88■□□□□ 0.45
SMCO2-204ENST00000538647 ADH1BP00325 375 aa17.84■□□□□ 0.45
SMCO2-204ENST00000538647 HELBQ8NG08 1087 aaPredicted RBP17.84■□□□□ 0.45
SMCO2-204ENST00000538647 FAM160A2Q8N612 972 aaPredicted RBP17.83■□□□□ 0.44
SMCO2-204ENST00000538647 BANK1Q8NDB2 785 aa17.83■□□□□ 0.44
SMCO2-204ENST00000538647 ITGBL1O95965 494 aaPredicted RBP17.81■□□□□ 0.44
SMCO2-204ENST00000538647 CTDSPL2Q05D32 466 aa17.81■□□□□ 0.44
SMCO2-204ENST00000538647 MSS51Q4VC12 460 aa17.81■□□□□ 0.44
SMCO2-204ENST00000538647 NKX2-3Q8TAU0 364 aa17.81■□□□□ 0.44
SMCO2-204ENST00000538647 USP17L8P0C7I0 530 aa17.8■□□□□ 0.44
SMCO2-204ENST00000538647 KCNC4Q03721 635 aa17.8■□□□□ 0.44
SMCO2-204ENST00000538647 FLIIQ13045 1269 aa17.8■□□□□ 0.44
SMCO2-204ENST00000538647 PRDM9Q9NQV7 894 aa17.8■□□□□ 0.44
SMCO2-204ENST00000538647 MCM6Q14566 821 aa17.78■□□□□ 0.44
SMCO2-204ENST00000538647 DESI1Q6ICB0 168 aa17.78■□□□□ 0.44
SMCO2-204ENST00000538647 SNRKQ9NRH2 765 aa17.78■□□□□ 0.44
SMCO2-204ENST00000538647 JUNDP17535 347 aa17.76■□□□□ 0.43
SMCO2-204ENST00000538647 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
SMCO2-204ENST00000538647 SLC6A16Q9GZN6 736 aa17.74■□□□□ 0.43
SMCO2-204ENST00000538647 LRRN4Q8WUT4 740 aa17.73■□□□□ 0.43
SMCO2-204ENST00000538647 DXOO77932 396 aaKnown RBP17.72■□□□□ 0.43
SMCO2-204ENST00000538647 MTMR14Q8NCE2 650 aa17.72■□□□□ 0.43
SMCO2-204ENST00000538647 MMP16P51512 607 aa17.71■□□□□ 0.43
SMCO2-204ENST00000538647 LYPD8Q6UX82 237 aa17.71■□□□□ 0.43
SMCO2-204ENST00000538647 C14orf37Q86TY3 774 aa17.71■□□□□ 0.43
SMCO2-204ENST00000538647 S1PR4O95977 384 aa17.7■□□□□ 0.42
SMCO2-204ENST00000538647 HMX1Q9NP08 348 aaPredicted RBP17.69■□□□□ 0.42
SMCO2-204ENST00000538647 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
SMCO2-204ENST00000538647 PTPRNQ16849 979 aa17.67■□□□□ 0.42
SMCO2-204ENST00000538647 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
SMCO2-204ENST00000538647 NUDT12Q9BQG2 462 aa17.64■□□□□ 0.41
SMCO2-204ENST00000538647 SOCS7O14512 581 aa17.63■□□□□ 0.41
SMCO2-204ENST00000538647 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
SMCO2-204ENST00000538647 CCNYL3P0C7X3 344 aa17.61■□□□□ 0.41
SMCO2-204ENST00000538647 GJD4Q96KN9 370 aaPredicted RBP17.61■□□□□ 0.41
SMCO2-204ENST00000538647 APBB1O00213 710 aa17.6■□□□□ 0.41
SMCO2-204ENST00000538647 TRIM34Q9BYJ4 488 aa17.6■□□□□ 0.41
SMCO2-204ENST00000538647 NR6A1Q15406 480 aa17.59■□□□□ 0.41
SMCO2-204ENST00000538647 EPS8L1Q8TE68 723 aa17.59■□□□□ 0.41
SMCO2-204ENST00000538647 MAP10Q9P2G4 905 aa17.59■□□□□ 0.41
SMCO2-204ENST00000538647 F12P00748 615 aaPredicted RBP17.58■□□□□ 0.4
SMCO2-204ENST00000538647 CCDC24Q8N4L8 307 aa17.58■□□□□ 0.4
SMCO2-204ENST00000538647 FCF1Q9Y324 198 aaKnown RBP17.58■□□□□ 0.4
SMCO2-204ENST00000538647 PPEF1O14829 653 aaPredicted RBP17.57■□□□□ 0.4
SMCO2-204ENST00000538647 CTHP32929 405 aa17.57■□□□□ 0.4
SMCO2-204ENST00000538647 POM121Q96HA1 1249 aa17.57■□□□□ 0.4
SMCO2-204ENST00000538647 EVA1BQ9NVM1 165 aa17.57■□□□□ 0.4
SMCO2-204ENST00000538647 GGCXP38435 758 aa17.56■□□□□ 0.4
SMCO2-204ENST00000538647 PPP1R18Q6NYC8 613 aa17.56■□□□□ 0.4
SMCO2-204ENST00000538647 CLUAP1Q96AJ1 413 aa17.56■□□□□ 0.4
SMCO2-204ENST00000538647 PLA2G2EQ9NZK7 142 aa17.56■□□□□ 0.4
SMCO2-204ENST00000538647 RNF223E7ERA6 249 aa17.55■□□□□ 0.4
SMCO2-204ENST00000538647 IFFO2Q5TF58 517 aa17.54■□□□□ 0.4
SMCO2-204ENST00000538647 COG6Q9Y2V7 657 aa17.54■□□□□ 0.4
SMCO2-204ENST00000538647 KCNH2Q12809 1159 aa17.53■□□□□ 0.4
SMCO2-204ENST00000538647 TBC1D2BQ9UPU7 963 aa17.53■□□□□ 0.4
SMCO2-204ENST00000538647 NDUFB9Q9Y6M9 179 aa17.53■□□□□ 0.4
SMCO2-204ENST00000538647 GDPD2Q9HCC8 539 aa17.52■□□□□ 0.4
SMCO2-204ENST00000538647 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.52■□□□□ 0.4
SMCO2-204ENST00000538647 PLSCR2Q9NRY7 297 aa17.52■□□□□ 0.4
SMCO2-204ENST00000538647 RAD21O60216 631 aa17.51■□□□□ 0.39
SMCO2-204ENST00000538647 PRM3Q9NNZ6 103 aa17.51■□□□□ 0.39
SMCO2-204ENST00000538647 ZMYND15Q9H091 742 aa17.5■□□□□ 0.39
SMCO2-204ENST00000538647 PTCRAQ6ISU1 281 aaPredicted RBP17.49■□□□□ 0.39
SMCO2-204ENST00000538647 ANKLE1Q8NAG6 615 aa17.48■□□□□ 0.39
SMCO2-204ENST00000538647 ABL2P42684 1182 aa17.46■□□□□ 0.39
SMCO2-204ENST00000538647 UNC93B1Q9H1C4 597 aa17.45■□□□□ 0.38
SMCO2-204ENST00000538647 A6NJR5 290 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms