RNA–Protein interactions for RNA: ENST00000538625.1

C2CD3-212, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-212ENST00000538625 RXRBP28702 533 aa10.72□□□□□ -0.69
C2CD3-212ENST00000538625 L3MBTL2Q969R5 705 aa10.72□□□□□ -0.69
C2CD3-212ENST00000538625 CCDC144AA2RUR9 1427 aa10.72□□□□□ -0.69
C2CD3-212ENST00000538625 ADGRL3Q9HAR2 1447 aa10.72□□□□□ -0.69
C2CD3-212ENST00000538625 ASXL1Q8IXJ9 1541 aa10.72□□□□□ -0.69
C2CD3-212ENST00000538625 SHPRHQ149N8 1683 aa10.72□□□□□ -0.69
C2CD3-212ENST00000538625 DDX17Q92841 729 aaKnown RBP10.71□□□□□ -0.69
C2CD3-212ENST00000538625 ZNF316A6NFI3 1004 aaPredicted RBP10.7□□□□□ -0.7
C2CD3-212ENST00000538625 AFF2P51816 1311 aa10.69□□□□□ -0.7
C2CD3-212ENST00000538625 C8orf37Q96NL8 207 aa10.69□□□□□ -0.7
C2CD3-212ENST00000538625 ROBO2Q9HCK4 1378 aa10.68□□□□□ -0.7
C2CD3-212ENST00000538625 SETD1AO15047 1707 aaKnown RBP10.68□□□□□ -0.7
C2CD3-212ENST00000538625 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
C2CD3-212ENST00000538625 PTCH1Q13635 1447 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 SPATA31E1Q6ZUB1 1445 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 NHSL1Q5SYE7 1610 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 ADAMTS2O95450 1211 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 RGL3Q3MIN7 710 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 NGLY1Q96IV0 654 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 ORAI2Q96SN7 254 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 NALCNQ8IZF0 1738 aa10.67□□□□□ -0.7
C2CD3-212ENST00000538625 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
C2CD3-212ENST00000538625 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.7
C2CD3-212ENST00000538625 QTRT2Q9H974 415 aaKnown RBP10.66□□□□□ -0.7
C2CD3-212ENST00000538625 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.7
C2CD3-212ENST00000538625 RBM6P78332 1123 aaKnown RBP10.65□□□□□ -0.7
C2CD3-212ENST00000538625 ESCO1Q5FWF5 840 aa10.65□□□□□ -0.7
C2CD3-212ENST00000538625 STAC3Q96MF2 364 aa10.65□□□□□ -0.7
C2CD3-212ENST00000538625 STK26Q9P289 416 aa10.65□□□□□ -0.7
C2CD3-212ENST00000538625 NBPF8Q3BBV2 869 aa10.64□□□□□ -0.71
C2CD3-212ENST00000538625 PPLO60437 1756 aa10.64□□□□□ -0.71
C2CD3-212ENST00000538625 ADGRF5Q8IZF2 1346 aa10.63□□□□□ -0.71
C2CD3-212ENST00000538625 CDK12Q9NYV4 1490 aaPredicted RBP10.63□□□□□ -0.71
C2CD3-212ENST00000538625 PRAG1Q86YV5 1406 aa10.63□□□□□ -0.71
C2CD3-212ENST00000538625 NPHP3Q7Z494 1330 aa10.62□□□□□ -0.71
C2CD3-212ENST00000538625 WAPLQ7Z5K2 1190 aa10.62□□□□□ -0.71
C2CD3-212ENST00000538625 USP21Q9UK80 565 aa10.62□□□□□ -0.71
C2CD3-212ENST00000538625 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
C2CD3-212ENST00000538625 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
C2CD3-212ENST00000538625 FOXO3O43524 673 aa10.61□□□□□ -0.71
C2CD3-212ENST00000538625 TMEM132EQ6IEE7 984 aa10.61□□□□□ -0.71
C2CD3-212ENST00000538625 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
C2CD3-212ENST00000538625 LAMC1P11047 1609 aa10.6□□□□□ -0.71
C2CD3-212ENST00000538625 TRPC5Q9UL62 973 aaPredicted RBP10.6□□□□□ -0.71
C2CD3-212ENST00000538625 LRPPRCP42704 1394 aaKnown RBP10.6□□□□□ -0.71
C2CD3-212ENST00000538625 XPCQ01831 940 aaPredicted RBP10.59□□□□□ -0.71
C2CD3-212ENST00000538625 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
C2CD3-212ENST00000538625 DCAF11Q8TEB1 546 aa10.59□□□□□ -0.71
C2CD3-212ENST00000538625 GPRASP1Q5JY77 1395 aa10.59□□□□□ -0.71
C2CD3-212ENST00000538625 ABCC11Q96J66 1382 aa10.59□□□□□ -0.71
C2CD3-212ENST00000538625 CDC42BPGQ6DT37 1551 aa10.58□□□□□ -0.72
C2CD3-212ENST00000538625 MYOM2P54296 1465 aa10.58□□□□□ -0.72
C2CD3-212ENST00000538625 RGS12O14924 1447 aa10.58□□□□□ -0.72
C2CD3-212ENST00000538625 TECPR2O15040 1411 aa10.58□□□□□ -0.72
C2CD3-212ENST00000538625 SIRT1Q96EB6 747 aa10.57□□□□□ -0.72
C2CD3-212ENST00000538625 C14orf93Q9H972 538 aaKnown RBP10.57□□□□□ -0.72
C2CD3-212ENST00000538625 NRXN1Q9ULB1 1477 aa10.56□□□□□ -0.72
C2CD3-212ENST00000538625 PLEKHH1Q9ULM0 1364 aa10.56□□□□□ -0.72
C2CD3-212ENST00000538625 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
C2CD3-212ENST00000538625 PIK3C2GO75747 1445 aa10.56□□□□□ -0.72
C2CD3-212ENST00000538625 YTHDC2Q9H6S0 1430 aaKnown RBP10.56□□□□□ -0.72
C2CD3-212ENST00000538625 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
C2CD3-212ENST00000538625 HSPA5P11021 654 aaKnown RBP10.55□□□□□ -0.72
C2CD3-212ENST00000538625 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
C2CD3-212ENST00000538625 PXDNQ92626 1479 aa10.55□□□□□ -0.72
C2CD3-212ENST00000538625 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-212ENST00000538625 PSME1Q06323 249 aa10.54□□□□□ -0.72
C2CD3-212ENST00000538625 DIEXFQ68CQ4 756 aaKnown RBP10.54□□□□□ -0.72
C2CD3-212ENST00000538625 KRT28Q7Z3Y7 464 aa10.54□□□□□ -0.72
C2CD3-212ENST00000538625 IFT172Q9UG01 1749 aa10.54□□□□□ -0.72
C2CD3-212ENST00000538625 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
C2CD3-212ENST00000538625 TRPM1Q7Z4N2 1603 aa10.54□□□□□ -0.72
C2CD3-212ENST00000538625 COL22A1Q8NFW1 1626 aaPredicted RBP10.54□□□□□ -0.72
C2CD3-212ENST00000538625 SPATA31A3Q5VYP0 1347 aa10.54□□□□□ -0.72
C2CD3-212ENST00000538625 ATRNO75882 1429 aa10.53□□□□□ -0.72
C2CD3-212ENST00000538625 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-212ENST00000538625 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
C2CD3-212ENST00000538625 GJD4Q96KN9 370 aaPredicted RBP10.53□□□□□ -0.72
C2CD3-212ENST00000538625 POGKQ9P215 609 aa10.53□□□□□ -0.72
C2CD3-212ENST00000538625 PHF8Q9UPP1 1060 aa10.53□□□□□ -0.72
C2CD3-212ENST00000538625 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
C2CD3-212ENST00000538625 PRAM1Q96QH2 718 aa10.52□□□□□ -0.73
C2CD3-212ENST00000538625 BCL9LQ86UU0 1499 aa10.52□□□□□ -0.73
C2CD3-212ENST00000538625 ROCK2O75116 1388 aaKnown RBP10.52□□□□□ -0.73
C2CD3-212ENST00000538625 USP47Q96K76 1375 aa10.52□□□□□ -0.73
C2CD3-212ENST00000538625 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
C2CD3-212ENST00000538625 LMOD2Q6P5Q4 547 aa10.51□□□□□ -0.73
C2CD3-212ENST00000538625 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
C2CD3-212ENST00000538625 FMN2Q9NZ56 1722 aa10.5□□□□□ -0.73
C2CD3-212ENST00000538625 CCDC125Q86Z20 511 aa10.5□□□□□ -0.73
C2CD3-212ENST00000538625 CARD11Q9BXL7 1154 aa10.5□□□□□ -0.73
C2CD3-212ENST00000538625 KIF1AQ12756 1690 aa10.5□□□□□ -0.73
C2CD3-212ENST00000538625 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
C2CD3-212ENST00000538625 MARF1Q9Y4F3 1742 aaKnown RBP10.5□□□□□ -0.73
C2CD3-212ENST00000538625 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
C2CD3-212ENST00000538625 CABLES1Q8TDN4 633 aa10.49□□□□□ -0.73
C2CD3-212ENST00000538625 RGPD8O14715 1765 aaPredicted RBP10.48□□□□□ -0.73
C2CD3-212ENST00000538625 SLC4A2P04920 1241 aa10.48□□□□□ -0.73
C2CD3-212ENST00000538625 PMFBP1Q8TBY8 1022 aa10.48□□□□□ -0.73
C2CD3-212ENST00000538625 ZRANB1Q9UGI0 708 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms