RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 ERLIN2O94905 339 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 VPS37CA5D8V6 355 aaPredicted RBP8.3□□□□□ -1.08
SORT1-209ENST00000538502 BACH2Q9BYV9 841 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 FAM107BQ9H098 131 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 PDCL3Q9H2J4 239 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 ESPNB1AK53 854 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 CT47B1P0C2W7 299 aaPredicted RBP8.3□□□□□ -1.08
SORT1-209ENST00000538502 TOMM22Q9NS69 142 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 GNAI1P63096 354 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 GOLGA6L10A6NI86 522 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 BRMS1Q9HCU9 246 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 STK26Q9P289 416 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 NEXNQ0ZGT2 675 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 ZSCAN30Q86W11 494 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 CALCOCO1Q9P1Z2 691 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 MROH2BQ7Z745 1585 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 ERICH2A1L162 156 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 XBP1P17861 261 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 CECR2Q9BXF3 1484 aa8.29□□□□□ -1.08
SORT1-209ENST00000538502 KINO60870 393 aaKnown RBP8.28□□□□□ -1.08
SORT1-209ENST00000538502 CNTROBQ8N137 903 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 GBP3Q9H0R5 595 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 UBE2Q2Q8WVN8 375 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 WDR33Q9C0J8 1336 aaKnown RBP8.28□□□□□ -1.08
SORT1-209ENST00000538502 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
SORT1-209ENST00000538502 MCM5P33992 734 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 LUC7LQ9NQ29 371 aaKnown RBP8.28□□□□□ -1.08
SORT1-209ENST00000538502 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
SORT1-209ENST00000538502 SAFB2Q14151 953 aaKnown RBP eCLIP8.28□□□□□ -1.08
SORT1-209ENST00000538502 IL27Q8NEV9 243 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 APAF1O14727 1248 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 ANKRD1Q15327 319 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
SORT1-209ENST00000538502 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
SORT1-209ENST00000538502 PRM3Q9NNZ6 103 aa8.28□□□□□ -1.08
SORT1-209ENST00000538502 K7ELQ4 463 aaPredicted RBP8.27□□□□□ -1.09
SORT1-209ENST00000538502 NAP1L1P55209 391 aaKnown RBP8.27□□□□□ -1.09
SORT1-209ENST00000538502 MCM3P25205 808 aa8.27□□□□□ -1.09
SORT1-209ENST00000538502 AMPHP49418 695 aa8.27□□□□□ -1.09
SORT1-209ENST00000538502 RBM10P98175 930 aaKnown RBP8.27□□□□□ -1.09
SORT1-209ENST00000538502 CGNQ9P2M7 1197 aaKnown RBP8.27□□□□□ -1.09
SORT1-209ENST00000538502 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
SORT1-209ENST00000538502 PLEKHH2Q8IVE3 1493 aa8.27□□□□□ -1.09
SORT1-209ENST00000538502 DIAPH1O60610 1272 aaKnown RBP8.27□□□□□ -1.09
SORT1-209ENST00000538502 COG3Q96JB2 828 aa8.27□□□□□ -1.09
SORT1-209ENST00000538502 SOX12O15370 315 aa8.26□□□□□ -1.09
SORT1-209ENST00000538502 G3BP1Q13283 466 aaKnown RBP eCLIP8.26□□□□□ -1.098e-6■□□□□ 9
SORT1-209ENST00000538502 PDILTQ8N807 584 aa8.26□□□□□ -1.09
SORT1-209ENST00000538502 SDF4Q9BRK5 362 aa8.26□□□□□ -1.09
SORT1-209ENST00000538502 DHX16O60231 1041 aaKnown RBP8.26□□□□□ -1.09
SORT1-209ENST00000538502 SMC2O95347 1197 aa8.26□□□□□ -1.09
SORT1-209ENST00000538502 AXDND1Q5T1B0 1012 aaPredicted RBP8.26□□□□□ -1.09
SORT1-209ENST00000538502 RRP7AQ9Y3A4 280 aaKnown RBP8.26□□□□□ -1.09
SORT1-209ENST00000538502 PRPF40AO75400 957 aaKnown RBP8.26□□□□□ -1.09
SORT1-209ENST00000538502 JMYQ8N9B5 988 aa8.26□□□□□ -1.09
SORT1-209ENST00000538502 CSB-PGBD3P0DP91 1061 aa8.26□□□□□ -1.09
SORT1-209ENST00000538502 ANKRD18AQ8IVF6 992 aa8.26□□□□□ -1.09
SORT1-209ENST00000538502 NOL10Q9BSC4 688 aaKnown RBP8.26□□□□□ -1.09
SORT1-209ENST00000538502 MAGEC2Q9UBF1 373 aaPredicted RBP8.26□□□□□ -1.09
SORT1-209ENST00000538502 MYOM3Q5VTT5 1437 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 MCM4P33991 863 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 C9orf78Q9NZ63 289 aaPredicted RBP8.25□□□□□ -1.09
SORT1-209ENST00000538502 FHOD3Q2V2M9 1422 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 C1orf141Q5JVX7 400 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 DDX11Q96FC9 970 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 ZNHIT6Q9NWK9 470 aaKnown RBP8.25□□□□□ -1.09
SORT1-209ENST00000538502 PLEKHH1Q9ULM0 1364 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 BCL2L13Q9BXK5 485 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 PDE4CQ08493 712 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 VPS53Q5VIR6 699 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 NFXL1Q6ZNB6 911 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 GIMAP7Q8NHV1 300 aa8.25□□□□□ -1.09
SORT1-209ENST00000538502 EPS15P42566 896 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 RIPK4P57078 832 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 RNF214Q8ND24 703 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 PDS5BQ9NTI5 1447 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 WIZO95785 1651 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 PAK3O75914 559 aaPredicted RBP8.24□□□□□ -1.09
SORT1-209ENST00000538502 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.24□□□□□ -1.09
SORT1-209ENST00000538502 LNPKQ9C0E8 428 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 KIF21BO75037 1637 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 SMTNL1A8MU46 457 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 ERC1Q8IUD2 1116 aa8.24□□□□□ -1.09
SORT1-209ENST00000538502 VGFO15240 615 aaPredicted RBP8.23□□□□□ -1.09
SORT1-209ENST00000538502 HSP90AB3PQ58FF7 597 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 HSP90AB2PQ58FF8 381 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 RALYLQ86SE5 291 aaKnown RBP8.23□□□□□ -1.09
SORT1-209ENST00000538502 CT47A1Q5JQC4 288 aaPredicted RBP8.23□□□□□ -1.09
SORT1-209ENST00000538502 TNMDQ9H2S6 317 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 POTEB2H3BUK9 544 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 ODF2Q5BJF6 829 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 ZSCAN31Q96LW9 406 aaPredicted RBP8.23□□□□□ -1.09
SORT1-209ENST00000538502 GNAI3P08754 354 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 MAP9Q49MG5 647 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 NEMFO60524 1076 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 TXLNAP40222 546 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 MICALCLQ6ZW33 695 aa8.23□□□□□ -1.09
SORT1-209ENST00000538502 OFD1O75665 1012 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms