RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
SP140-212ENST00000538494 KIDINS220Q9ULH0 1771 aa9.41□□□□□ -0.9
SP140-212ENST00000538494 SETD1AO15047 1707 aaKnown RBP9.41□□□□□ -0.9
SP140-212ENST00000538494 POLR1AO95602 1720 aaPredicted RBP9.4□□□□□ -0.9
SP140-212ENST00000538494 MYO5CQ9NQX4 1742 aa9.4□□□□□ -0.9
SP140-212ENST00000538494 RNF17Q9BXT8 1623 aaKnown RBP9.39□□□□□ -0.91
SP140-212ENST00000538494 STRCP1A6NGW2 1772 aa9.39□□□□□ -0.91
SP140-212ENST00000538494 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
SP140-212ENST00000538494 ANKLE2Q86XL3 938 aa9.37□□□□□ -0.91
SP140-212ENST00000538494 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
SP140-212ENST00000538494 SYNMO15061 1565 aa9.36□□□□□ -0.91
SP140-212ENST00000538494 NPHP4O75161 1426 aaPredicted RBP9.35□□□□□ -0.91
SP140-212ENST00000538494 CLTCQ00610 1675 aaKnown RBP9.35□□□□□ -0.91
SP140-212ENST00000538494 CDK13Q14004 1512 aaKnown RBP9.35□□□□□ -0.91
SP140-212ENST00000538494 PLXNC1O60486 1568 aa9.34□□□□□ -0.91
SP140-212ENST00000538494 GOLGA8CPA6NN73 597 aa9.34□□□□□ -0.91
SP140-212ENST00000538494 OXER1Q8TDS5 423 aa9.34□□□□□ -0.91
SP140-212ENST00000538494 ABCC1P33527 1531 aa9.34□□□□□ -0.91
SP140-212ENST00000538494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.34□□□□□ -0.91
SP140-212ENST00000538494 CDC42BPBQ9Y5S2 1711 aa9.34□□□□□ -0.92
SP140-212ENST00000538494 ARHGAP5Q13017 1502 aa9.33□□□□□ -0.92
SP140-212ENST00000538494 THSD4Q6ZMP0 1018 aa9.33□□□□□ -0.92
SP140-212ENST00000538494 THEMISQ8N1K5 641 aaPredicted RBP9.33□□□□□ -0.92
SP140-212ENST00000538494 IRX2Q9BZI1 471 aaPredicted RBP9.33□□□□□ -0.92
SP140-212ENST00000538494 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
SP140-212ENST00000538494 RGS20O76081 388 aa9.32□□□□□ -0.92
SP140-212ENST00000538494 SLC4A5Q9BY07 1137 aa9.32□□□□□ -0.92
SP140-212ENST00000538494 BCL2L12Q9HB09 334 aa9.32□□□□□ -0.92
SP140-212ENST00000538494 KIF14Q15058 1648 aa9.31□□□□□ -0.92
SP140-212ENST00000538494 XIRP1Q702N8 1843 aaKnown RBP9.31□□□□□ -0.92
SP140-212ENST00000538494 BHMG1C9JSJ3 638 aaPredicted RBP9.31□□□□□ -0.92
SP140-212ENST00000538494 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
SP140-212ENST00000538494 WNT2BQ93097 391 aa9.31□□□□□ -0.92
SP140-212ENST00000538494 CDK11AQ9UQ88 783 aaPredicted RBP9.31□□□□□ -0.92
SP140-212ENST00000538494 ITSN2Q9NZM3 1697 aa9.31□□□□□ -0.92
SP140-212ENST00000538494 TROQ12816 1431 aaPredicted RBP9.31□□□□□ -0.92
SP140-212ENST00000538494 IQGAP1P46940 1657 aa9.3□□□□□ -0.92
SP140-212ENST00000538494 SAMD9LQ8IVG5 1584 aa9.3□□□□□ -0.92
SP140-212ENST00000538494 PTPREP23469 700 aa9.3□□□□□ -0.92
SP140-212ENST00000538494 TNRQ92752 1358 aa9.29□□□□□ -0.92
SP140-212ENST00000538494 ZNF772Q68DY9 489 aaPredicted RBP9.29□□□□□ -0.92
SP140-212ENST00000538494 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
SP140-212ENST00000538494 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
SP140-212ENST00000538494 NLRP1Q9C000 1473 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 A0A0G2JS52 829 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 FOSBP53539 338 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 MIA2Q96PC5 1412 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 A2MP01023 1474 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 PZPP20742 1482 aa9.28□□□□□ -0.92
SP140-212ENST00000538494 JCADQ9P266 1359 aa9.27□□□□□ -0.93
SP140-212ENST00000538494 ZC3H13Q5T200 1668 aaKnown RBP9.27□□□□□ -0.93
SP140-212ENST00000538494 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.93
SP140-212ENST00000538494 UGGT1Q9NYU2 1555 aa9.26□□□□□ -0.93
SP140-212ENST00000538494 GGT6Q6P531 493 aa9.26□□□□□ -0.93
SP140-212ENST00000538494 PREX2Q70Z35 1606 aa9.26□□□□□ -0.93
SP140-212ENST00000538494 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
SP140-212ENST00000538494 RXRBP28702 533 aa9.25□□□□□ -0.93
SP140-212ENST00000538494 PPP1R15BQ5SWA1 713 aa9.25□□□□□ -0.93
SP140-212ENST00000538494 ROBO1Q9Y6N7 1651 aa9.25□□□□□ -0.93
SP140-212ENST00000538494 SPAG9O60271 1321 aaKnown RBP9.25□□□□□ -0.93
SP140-212ENST00000538494 FAM135AQ9P2D6 1515 aa9.25□□□□□ -0.93
SP140-212ENST00000538494 CRISPLD2Q9H0B8 497 aa9.24□□□□□ -0.93
SP140-212ENST00000538494 ATP7AQ04656 1500 aa9.24□□□□□ -0.93
SP140-212ENST00000538494 SPATA31A6Q5VVP1 1343 aa9.24□□□□□ -0.93
SP140-212ENST00000538494 LRP6O75581 1613 aa9.23□□□□□ -0.93
SP140-212ENST00000538494 FGD6Q6ZV73 1430 aa9.23□□□□□ -0.93
SP140-212ENST00000538494 KIAA1107Q9UPP5 1409 aa9.23□□□□□ -0.93
SP140-212ENST00000538494 TRIM52Q96A61 297 aa9.23□□□□□ -0.93
SP140-212ENST00000538494 ADAM33Q9BZ11 813 aa9.23□□□□□ -0.93
SP140-212ENST00000538494 NBPF3Q9H094 633 aa9.23□□□□□ -0.93
SP140-212ENST00000538494 INO80Q9ULG1 1556 aaPredicted RBP9.23□□□□□ -0.93
SP140-212ENST00000538494 CLIP1P30622 1438 aa9.22□□□□□ -0.93
SP140-212ENST00000538494 ZDHHC16Q969W1 377 aa9.22□□□□□ -0.93
SP140-212ENST00000538494 ANO8Q9HCE9 1232 aaPredicted RBP9.22□□□□□ -0.93
SP140-212ENST00000538494 EP400Q96L91 3159 aa9.22□□□□□ -0.93
SP140-212ENST00000538494 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.93
SP140-212ENST00000538494 EVI5O60447 810 aa9.21□□□□□ -0.94
SP140-212ENST00000538494 FMN1Q68DA7 1419 aa9.21□□□□□ -0.94
SP140-212ENST00000538494 MAP3K1Q13233 1512 aa9.21□□□□□ -0.94
SP140-212ENST00000538494 SETBP1Q9Y6X0 1596 aa9.2□□□□□ -0.94
SP140-212ENST00000538494 ARHGAP23Q9P227 1491 aa9.2□□□□□ -0.94
SP140-212ENST00000538494 PDE4AP27815 886 aa9.19□□□□□ -0.94
SP140-212ENST00000538494 NKX1-1Q15270 411 aaPredicted RBP9.19□□□□□ -0.94
SP140-212ENST00000538494 TMEM94Q12767 1356 aa9.19□□□□□ -0.94
SP140-212ENST00000538494 DHX29Q7Z478 1369 aaKnown RBP9.19□□□□□ -0.94
SP140-212ENST00000538494 COL16A1Q07092 1604 aaPredicted RBP9.19□□□□□ -0.94
SP140-212ENST00000538494 CDC42BPAQ5VT25 1732 aa9.19□□□□□ -0.94
SP140-212ENST00000538494 PHLPP1O60346 1717 aa9.18□□□□□ -0.94
SP140-212ENST00000538494 LTKP29376 864 aa9.18□□□□□ -0.94
SP140-212ENST00000538494 HNRNPMP52272 730 aaKnown RBP eCLIP9.18□□□□□ -0.94
SP140-212ENST00000538494 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
SP140-212ENST00000538494 SLAIN2Q9P270 581 aa9.18□□□□□ -0.94
SP140-212ENST00000538494 SLIT1O75093 1534 aa9.17□□□□□ -0.94
SP140-212ENST00000538494 SYCP2Q9BX26 1530 aa9.17□□□□□ -0.94
SP140-212ENST00000538494 SCAF11Q99590 1463 aaKnown RBP9.17□□□□□ -0.94
SP140-212ENST00000538494 RTEL1-TNFRSF6BF6WH68 1400 aa9.17□□□□□ -0.94
SP140-212ENST00000538494 KCNA6P17658 529 aa9.17□□□□□ -0.94
SP140-212ENST00000538494 RGS12O14924 1447 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms