RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
MDM1-208ENST00000538454 RPIAP49247 311 aa11.61□□□□□ -0.55
MDM1-208ENST00000538454 PRR20EP86478 221 aa11.6□□□□□ -0.55
MDM1-208ENST00000538454 PRR20CP86479 221 aa11.6□□□□□ -0.55
MDM1-208ENST00000538454 PRR20DP86480 221 aa11.6□□□□□ -0.55
MDM1-208ENST00000538454 PRR20BP86481 221 aa11.6□□□□□ -0.55
MDM1-208ENST00000538454 PRR20AP86496 221 aa11.6□□□□□ -0.55
MDM1-208ENST00000538454 GIGYF2Q6Y7W6 1299 aaKnown RBP11.6□□□□□ -0.55
MDM1-208ENST00000538454 GDF9O60383 454 aa11.59□□□□□ -0.55
MDM1-208ENST00000538454 MMP16P51512 607 aa11.58□□□□□ -0.56
MDM1-208ENST00000538454 ZBTB24O43167 697 aaPredicted RBP11.57□□□□□ -0.56
MDM1-208ENST00000538454 FOXC1Q12948 553 aa11.57□□□□□ -0.56
MDM1-208ENST00000538454 SYMPKQ92797 1274 aaKnown RBP11.57□□□□□ -0.56
MDM1-208ENST00000538454 TRIM66O15016 1216 aa11.56□□□□□ -0.56
MDM1-208ENST00000538454 DXOO77932 396 aaKnown RBP11.56□□□□□ -0.56
MDM1-208ENST00000538454 CD2BP2O95400 341 aaKnown RBP11.56□□□□□ -0.56
MDM1-208ENST00000538454 SPIRE2Q8WWL2 714 aa11.56□□□□□ -0.56
MDM1-208ENST00000538454 AK7Q96M32 723 aa11.56□□□□□ -0.56
MDM1-208ENST00000538454 FDX1P10109 184 aa11.55□□□□□ -0.56
MDM1-208ENST00000538454 PKDCCQ504Y2 493 aa11.55□□□□□ -0.56
MDM1-208ENST00000538454 PARP9Q8IXQ6 854 aa11.55□□□□□ -0.56
MDM1-208ENST00000538454 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
MDM1-208ENST00000538454 FAM187AA6NFU0 413 aa11.53□□□□□ -0.56
MDM1-208ENST00000538454 BEGAINQ9BUH8 593 aa11.53□□□□□ -0.56
MDM1-208ENST00000538454 DGAT1O75907 488 aa11.52□□□□□ -0.57
MDM1-208ENST00000538454 NDUFV2P19404 249 aa11.52□□□□□ -0.57
MDM1-208ENST00000538454 RETREG3Q86VR2 466 aa11.52□□□□□ -0.57
MDM1-208ENST00000538454 CCDC24Q8N4L8 307 aa11.52□□□□□ -0.57
MDM1-208ENST00000538454 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
MDM1-208ENST00000538454 MOXD2PA6NHM9 499 aa11.51□□□□□ -0.57
MDM1-208ENST00000538454 C6orf229H3BNL8 230 aa11.51□□□□□ -0.57
MDM1-208ENST00000538454 JUNDP17535 347 aa11.51□□□□□ -0.57
MDM1-208ENST00000538454 TRIM32Q13049 653 aa11.5□□□□□ -0.57
MDM1-208ENST00000538454 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
MDM1-208ENST00000538454 MS4A1P11836 297 aa11.48□□□□□ -0.57
MDM1-208ENST00000538454 MYT1Q01538 1121 aa11.47□□□□□ -0.57
MDM1-208ENST00000538454 PDE4DQ08499 809 aa11.46□□□□□ -0.57
MDM1-208ENST00000538454 CYP4X1Q8N118 509 aa11.46□□□□□ -0.57
MDM1-208ENST00000538454 TBC1D2Q9BYX2 928 aa11.46□□□□□ -0.57
MDM1-208ENST00000538454 DIXDC1Q155Q3 683 aa11.44□□□□□ -0.58
MDM1-208ENST00000538454 NUDT12Q9BQG2 462 aa11.44□□□□□ -0.58
MDM1-208ENST00000538454 TOR4AQ9NXH8 423 aa11.44□□□□□ -0.58
MDM1-208ENST00000538454 WNT7AO00755 349 aa11.42□□□□□ -0.58
MDM1-208ENST00000538454 MTMR2Q13614 643 aa11.42□□□□□ -0.58
MDM1-208ENST00000538454 RSBN1LQ6PCB5 846 aaPredicted RBP11.42□□□□□ -0.58
MDM1-208ENST00000538454 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
MDM1-208ENST00000538454 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
MDM1-208ENST00000538454 PRR7Q8TB68 274 aa11.41□□□□□ -0.58
MDM1-208ENST00000538454 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
MDM1-208ENST00000538454 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
MDM1-208ENST00000538454 CCNYL3P0C7X3 344 aa11.39□□□□□ -0.59
MDM1-208ENST00000538454 BCANQ96GW7 911 aa11.39□□□□□ -0.59
MDM1-208ENST00000538454 MRGPRX2Q96LB1 330 aa11.39□□□□□ -0.59
MDM1-208ENST00000538454 SPDYE5A6NIY4 337 aa11.38□□□□□ -0.59
MDM1-208ENST00000538454 GJA5P36382 358 aa11.38□□□□□ -0.59
MDM1-208ENST00000538454 SKOR1P84550 965 aa11.38□□□□□ -0.59
MDM1-208ENST00000538454 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
MDM1-208ENST00000538454 PCDHB15Q9Y5E8 787 aa11.38□□□□□ -0.59
MDM1-208ENST00000538454 SPTLC1O15269 473 aa11.37□□□□□ -0.59
MDM1-208ENST00000538454 WNT7BP56706 349 aa11.37□□□□□ -0.59
MDM1-208ENST00000538454 PTPRNQ16849 979 aa11.37□□□□□ -0.59
MDM1-208ENST00000538454 RC3H1Q5TC82 1133 aaKnown RBP11.36□□□□□ -0.59
MDM1-208ENST00000538454 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
MDM1-208ENST00000538454 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
MDM1-208ENST00000538454 AAASQ9NRG9 546 aa11.36□□□□□ -0.59
MDM1-208ENST00000538454 CSPP1Q1MSJ5 1256 aa11.35□□□□□ -0.59
MDM1-208ENST00000538454 DESI1Q6ICB0 168 aa11.34□□□□□ -0.59
MDM1-208ENST00000538454 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
MDM1-208ENST00000538454 AVPP01185 164 aa11.33□□□□□ -0.6
MDM1-208ENST00000538454 HRCP23327 699 aa11.33□□□□□ -0.6
MDM1-208ENST00000538454 MYSM1Q5VVJ2 828 aa11.33□□□□□ -0.6
MDM1-208ENST00000538454 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
MDM1-208ENST00000538454 SMPD1P17405 629 aa11.32□□□□□ -0.6
MDM1-208ENST00000538454 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
MDM1-208ENST00000538454 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
MDM1-208ENST00000538454 EVA1BQ9NVM1 165 aa11.32□□□□□ -0.6
MDM1-208ENST00000538454 J3QL48 77 aa11.31□□□□□ -0.6
MDM1-208ENST00000538454 AXIN1O15169 862 aa11.31□□□□□ -0.6
MDM1-208ENST00000538454 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
MDM1-208ENST00000538454 CRIPAKQ8N1N5 446 aa11.31□□□□□ -0.6
MDM1-208ENST00000538454 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
MDM1-208ENST00000538454 POTECB2RU33 542 aa11.3□□□□□ -0.6
MDM1-208ENST00000538454 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
MDM1-208ENST00000538454 SH3BP2P78314 561 aa11.29□□□□□ -0.6
MDM1-208ENST00000538454 CTC1Q2NKJ3 1217 aa11.29□□□□□ -0.6
MDM1-208ENST00000538454 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
MDM1-208ENST00000538454 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
MDM1-208ENST00000538454 CTHP32929 405 aa11.28□□□□□ -0.6
MDM1-208ENST00000538454 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
MDM1-208ENST00000538454 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
MDM1-208ENST00000538454 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
MDM1-208ENST00000538454 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
MDM1-208ENST00000538454 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
MDM1-208ENST00000538454 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
MDM1-208ENST00000538454 ALDH1A1P00352 501 aa11.26□□□□□ -0.61
MDM1-208ENST00000538454 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
MDM1-208ENST00000538454 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
MDM1-208ENST00000538454 QPCTQ16769 361 aa11.26□□□□□ -0.61
MDM1-208ENST00000538454 BAP1Q92560 729 aa11.26□□□□□ -0.61
MDM1-208ENST00000538454 TSC1Q92574 1164 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms