RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LRPPRCP42704 1394 aaKnown RBP14.76□□□□□ -0.05
TNFRSF1A-211ENST00000538363 DDX10Q13206 875 aaKnown RBP14.76□□□□□ -0.05
TNFRSF1A-211ENST00000538363 NWD1Q149M9 1564 aa14.76□□□□□ -0.05
TNFRSF1A-211ENST00000538363 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
TNFRSF1A-211ENST00000538363 METP08581 1390 aa14.75□□□□□ -0.05
TNFRSF1A-211ENST00000538363 DIEXFQ68CQ4 756 aaKnown RBP14.75□□□□□ -0.05
TNFRSF1A-211ENST00000538363 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
TNFRSF1A-211ENST00000538363 MINK1Q8N4C8 1332 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-211ENST00000538363 ADGRB1O14514 1584 aa14.74□□□□□ -0.05
TNFRSF1A-211ENST00000538363 C14orf37Q86TY3 774 aa14.74□□□□□ -0.05
TNFRSF1A-211ENST00000538363 ARHGEF28Q8N1W1 1705 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-211ENST00000538363 EVC2Q86UK5 1308 aa14.73□□□□□ -0.05
TNFRSF1A-211ENST00000538363 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
TNFRSF1A-211ENST00000538363 ABCC11Q96J66 1382 aa14.73□□□□□ -0.05
TNFRSF1A-211ENST00000538363 SRPK2P78362 688 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-211ENST00000538363 PTPRUQ92729 1446 aa14.71□□□□□ -0.05
TNFRSF1A-211ENST00000538363 CCDC7Q96M83 1385 aa14.71□□□□□ -0.06
TNFRSF1A-211ENST00000538363 PIK3R4Q99570 1358 aa14.71□□□□□ -0.06
TNFRSF1A-211ENST00000538363 XIRP1Q702N8 1843 aaKnown RBP14.71□□□□□ -0.06
TNFRSF1A-211ENST00000538363 KIF7Q2M1P5 1343 aa14.7□□□□□ -0.06
TNFRSF1A-211ENST00000538363 TMC1Q8TDI8 760 aa14.7□□□□□ -0.06
TNFRSF1A-211ENST00000538363 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
TNFRSF1A-211ENST00000538363 QRICH2Q9H0J4 1663 aa14.69□□□□□ -0.06
TNFRSF1A-211ENST00000538363 ZBTB22O15209 634 aa14.69□□□□□ -0.06
TNFRSF1A-211ENST00000538363 PROSER2Q86WR7 435 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-211ENST00000538363 TESK2Q96S53 571 aa14.69□□□□□ -0.06
TNFRSF1A-211ENST00000538363 CPS1P31327 1500 aa14.69□□□□□ -0.06
TNFRSF1A-211ENST00000538363 WASHC2AQ641Q2 1341 aa14.68□□□□□ -0.06
TNFRSF1A-211ENST00000538363 ZNF335Q9H4Z2 1342 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-211ENST00000538363 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-211ENST00000538363 KCNA6P17658 529 aa14.68□□□□□ -0.06
TNFRSF1A-211ENST00000538363 NALCNQ8IZF0 1738 aa14.68□□□□□ -0.06
TNFRSF1A-211ENST00000538363 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
TNFRSF1A-211ENST00000538363 CDK19Q9BWU1 502 aa14.66□□□□□ -0.06
TNFRSF1A-211ENST00000538363 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
TNFRSF1A-211ENST00000538363 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
TNFRSF1A-211ENST00000538363 NKTRP30414 1462 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-211ENST00000538363 DISP3Q9P2K9 1392 aa14.65□□□□□ -0.06
TNFRSF1A-211ENST00000538363 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-211ENST00000538363 CERKQ8TCT0 537 aa14.65□□□□□ -0.06
TNFRSF1A-211ENST00000538363 CABP2Q9NPB3 220 aa14.65□□□□□ -0.06
TNFRSF1A-211ENST00000538363 CNGB1Q14028 1251 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-211ENST00000538363 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
TNFRSF1A-211ENST00000538363 PLEKHH1Q9ULM0 1364 aa14.63□□□□□ -0.07
TNFRSF1A-211ENST00000538363 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
TNFRSF1A-211ENST00000538363 ANP32CO43423 234 aa14.63□□□□□ -0.07
TNFRSF1A-211ENST00000538363 WASLO00401 505 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-211ENST00000538363 TECPR2O15040 1411 aa14.62□□□□□ -0.07
TNFRSF1A-211ENST00000538363 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
TNFRSF1A-211ENST00000538363 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-211ENST00000538363 RBM33Q96EV2 1170 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-211ENST00000538363 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
TNFRSF1A-211ENST00000538363 PUS7Q96PZ0 661 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-211ENST00000538363 PANK3Q9H999 370 aa14.6□□□□□ -0.07
TNFRSF1A-211ENST00000538363 LRRC7Q96NW7 1537 aa14.6□□□□□ -0.07
TNFRSF1A-211ENST00000538363 ATAD2Q6PL18 1390 aa14.6□□□□□ -0.07
TNFRSF1A-211ENST00000538363 HDGFL2Q7Z4V5 671 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-211ENST00000538363 KNSTRNQ9Y448 316 aa14.59□□□□□ -0.07
TNFRSF1A-211ENST00000538363 TERF2IPQ9NYB0 399 aa14.58□□□□□ -0.08
TNFRSF1A-211ENST00000538363 ATF3P18847 181 aa14.57□□□□□ -0.08
TNFRSF1A-211ENST00000538363 NUDT16Q96DE0 195 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-211ENST00000538363 SLC12A5Q9H2X9 1139 aa14.57□□□□□ -0.08
TNFRSF1A-211ENST00000538363 TMEM94Q12767 1356 aa14.56□□□□□ -0.08
TNFRSF1A-211ENST00000538363 ADGRB2O60241 1585 aa14.56□□□□□ -0.08
TNFRSF1A-211ENST00000538363 CABP1Q9NZU7 370 aa14.55□□□□□ -0.08
TNFRSF1A-211ENST00000538363 FMN2Q9NZ56 1722 aa14.55□□□□□ -0.08
TNFRSF1A-211ENST00000538363 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-211ENST00000538363 C19orf44Q9H6X5 657 aa14.54□□□□□ -0.08
TNFRSF1A-211ENST00000538363 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
TNFRSF1A-211ENST00000538363 TULP4Q9NRJ4 1543 aa14.54□□□□□ -0.08
TNFRSF1A-211ENST00000538363 CDC42BPGQ6DT37 1551 aa14.54□□□□□ -0.08
TNFRSF1A-211ENST00000538363 RGPD8O14715 1765 aaPredicted RBP14.53□□□□□ -0.08
TNFRSF1A-211ENST00000538363 ADGRL3Q9HAR2 1447 aa14.53□□□□□ -0.08
TNFRSF1A-211ENST00000538363 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
TNFRSF1A-211ENST00000538363 NGDNQ8NEJ9 315 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-211ENST00000538363 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
TNFRSF1A-211ENST00000538363 MSH6P52701 1360 aa14.52□□□□□ -0.08
TNFRSF1A-211ENST00000538363 USP32Q8NFA0 1604 aa14.51□□□□□ -0.09
TNFRSF1A-211ENST00000538363 PPIP5K1Q6PFW1 1433 aa14.5□□□□□ -0.09
TNFRSF1A-211ENST00000538363 CAPN15O75808 1086 aa14.5□□□□□ -0.09
TNFRSF1A-211ENST00000538363 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
TNFRSF1A-211ENST00000538363 CC2D1BQ5T0F9 858 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-211ENST00000538363 CADPS2Q86UW7 1296 aa14.5□□□□□ -0.09
TNFRSF1A-211ENST00000538363 MIER1Q8N108 512 aa14.5□□□□□ -0.09
TNFRSF1A-211ENST00000538363 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
TNFRSF1A-211ENST00000538363 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
TNFRSF1A-211ENST00000538363 TOPAZ1Q8N9V7 1692 aa14.49□□□□□ -0.09
TNFRSF1A-211ENST00000538363 KTN1Q86UP2 1357 aaKnown RBP14.48□□□□□ -0.09
TNFRSF1A-211ENST00000538363 ITSN1Q15811 1721 aa14.48□□□□□ -0.09
TNFRSF1A-211ENST00000538363 NCOA3Q9Y6Q9 1424 aa14.48□□□□□ -0.09
TNFRSF1A-211ENST00000538363 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
TNFRSF1A-211ENST00000538363 PHF8Q9UPP1 1060 aa14.47□□□□□ -0.09
TNFRSF1A-211ENST00000538363 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
TNFRSF1A-211ENST00000538363 PSME1Q06323 249 aa14.46□□□□□ -0.09
TNFRSF1A-211ENST00000538363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.46□□□□□ -0.09
TNFRSF1A-211ENST00000538363 MYOM1P52179 1685 aa14.46□□□□□ -0.1
TNFRSF1A-211ENST00000538363 PRR36Q9H6K5 1346 aa14.45□□□□□ -0.1
TNFRSF1A-211ENST00000538363 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF1A-211ENST00000538363 RALBP1Q15311 655 aa14.45□□□□□ -0.1
TNFRSF1A-211ENST00000538363 ANKARQ7Z5J8 1434 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms