RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.58
PTPN6-210ENST00000538318 C8orf37Q96NL8 207 aa24.89■■□□□ 1.58
PTPN6-210ENST00000538318 LRPPRCP42704 1394 aaKnown RBP24.88■■□□□ 1.57
PTPN6-210ENST00000538318 PIK3C2GO75747 1445 aa24.87■■□□□ 1.57
PTPN6-210ENST00000538318 ABCC11Q96J66 1382 aa24.87■■□□□ 1.57
PTPN6-210ENST00000538318 STK26Q9P289 416 aa24.86■■□□□ 1.57
PTPN6-210ENST00000538318 WAPLQ7Z5K2 1190 aa24.85■■□□□ 1.57
PTPN6-210ENST00000538318 KNDC1Q76NI1 1749 aa24.84■■□□□ 1.57
PTPN6-210ENST00000538318 TMEM132EQ6IEE7 984 aa24.84■■□□□ 1.57
PTPN6-210ENST00000538318 UPF1Q92900 1129 aaKnown RBP eCLIP24.84■■□□□ 1.57
PTPN6-210ENST00000538318 QTRT2Q9H974 415 aaKnown RBP24.84■■□□□ 1.57
PTPN6-210ENST00000538318 ESCO1Q5FWF5 840 aa24.83■■□□□ 1.57
PTPN6-210ENST00000538318 NPHP3Q7Z494 1330 aa24.83■■□□□ 1.56
PTPN6-210ENST00000538318 ADAMTS2O95450 1211 aa24.82■■□□□ 1.56
PTPN6-210ENST00000538318 NGLY1Q96IV0 654 aa24.81■■□□□ 1.56
PTPN6-210ENST00000538318 COL22A1Q8NFW1 1626 aaPredicted RBP24.81■■□□□ 1.56
PTPN6-210ENST00000538318 YTHDC2Q9H6S0 1430 aaKnown RBP24.8■■□□□ 1.56
PTPN6-210ENST00000538318 RBM6P78332 1123 aaKnown RBP24.8■■□□□ 1.56
PTPN6-210ENST00000538318 PLEKHH1Q9ULM0 1364 aa24.8■■□□□ 1.56
PTPN6-210ENST00000538318 PXDNQ92626 1479 aa24.79■■□□□ 1.56
PTPN6-210ENST00000538318 NRXN1Q9ULB1 1477 aa24.78■■□□□ 1.56
PTPN6-210ENST00000538318 SIRT1Q96EB6 747 aa24.78■■□□□ 1.56
PTPN6-210ENST00000538318 C14orf93Q9H972 538 aaKnown RBP24.78■■□□□ 1.56
PTPN6-210ENST00000538318 FOXO3O43524 673 aa24.77■■□□□ 1.56
PTPN6-210ENST00000538318 RGS12O14924 1447 aa24.76■■□□□ 1.55
PTPN6-210ENST00000538318 MYOM2P54296 1465 aa24.76■■□□□ 1.55
PTPN6-210ENST00000538318 FNBP4Q8N3X1 1017 aaPredicted RBP24.75■■□□□ 1.55
PTPN6-210ENST00000538318 RAB3GAP2Q9H2M9 1393 aa24.75■■□□□ 1.55
PTPN6-210ENST00000538318 FMN2Q9NZ56 1722 aa24.75■■□□□ 1.55
PTPN6-210ENST00000538318 NUTM2FA1L443 756 aa24.74■■□□□ 1.55
PTPN6-210ENST00000538318 USP21Q9UK80 565 aa24.73■■□□□ 1.55
PTPN6-210ENST00000538318 XPCQ01831 940 aaPredicted RBP24.72■■□□□ 1.55
PTPN6-210ENST00000538318 CFAP70Q5T0N1 1121 aa24.72■■□□□ 1.55
PTPN6-210ENST00000538318 DHX57Q6P158 1386 aaKnown RBP24.71■■□□□ 1.55
PTPN6-210ENST00000538318 TRPC5Q9UL62 973 aaPredicted RBP24.7■■□□□ 1.54
PTPN6-210ENST00000538318 KIF1AQ12756 1690 aa24.69■■□□□ 1.54
PTPN6-210ENST00000538318 MARF1Q9Y4F3 1742 aaKnown RBP24.68■■□□□ 1.54
PTPN6-210ENST00000538318 ATRNO75882 1429 aa24.67■■□□□ 1.54
PTPN6-210ENST00000538318 SPATA31A3Q5VYP0 1347 aa24.65■■□□□ 1.54
PTPN6-210ENST00000538318 RGPD8O14715 1765 aaPredicted RBP24.65■■□□□ 1.54
PTPN6-210ENST00000538318 BCL9LQ86UU0 1499 aa24.64■■□□□ 1.54
PTPN6-210ENST00000538318 PRAM1Q96QH2 718 aa24.64■■□□□ 1.54
PTPN6-210ENST00000538318 DLC1Q96QB1 1528 aa24.63■■□□□ 1.53
PTPN6-210ENST00000538318 KRT28Q7Z3Y7 464 aa24.63■■□□□ 1.53
PTPN6-210ENST00000538318 PHF8Q9UPP1 1060 aa24.61■■□□□ 1.53
PTPN6-210ENST00000538318 ADGRB1O14514 1584 aa24.61■■□□□ 1.53
PTPN6-210ENST00000538318 HRCP23327 699 aa24.6■■□□□ 1.53
PTPN6-210ENST00000538318 SAFB2Q14151 953 aaKnown RBP eCLIP24.6■■□□□ 1.53
PTPN6-210ENST00000538318 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
PTPN6-210ENST00000538318 PSME1Q06323 249 aa24.58■■□□□ 1.53
PTPN6-210ENST00000538318 POGKQ9P215 609 aa24.58■■□□□ 1.53
PTPN6-210ENST00000538318 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.57■■□□□ 1.52
PTPN6-210ENST00000538318 ADGRB2O60241 1585 aa24.56■■□□□ 1.52
PTPN6-210ENST00000538318 TNS3Q68CZ2 1445 aa24.56■■□□□ 1.52
PTPN6-210ENST00000538318 SLIT2O94813 1529 aa24.56■■□□□ 1.52
PTPN6-210ENST00000538318 USP32Q8NFA0 1604 aa24.55■■□□□ 1.52
PTPN6-210ENST00000538318 DCAF11Q8TEB1 546 aa24.55■■□□□ 1.52
PTPN6-210ENST00000538318 GJD4Q96KN9 370 aaPredicted RBP24.55■■□□□ 1.52
PTPN6-210ENST00000538318 STAC3Q96MF2 364 aa24.55■■□□□ 1.52
PTPN6-210ENST00000538318 SBNO1A3KN83 1393 aa24.54■■□□□ 1.52
PTPN6-210ENST00000538318 ANKARQ7Z5J8 1434 aa24.54■■□□□ 1.52
PTPN6-210ENST00000538318 TRAK1Q9UPV9 953 aa24.54■■□□□ 1.52
PTPN6-210ENST00000538318 KDM2AQ9Y2K7 1162 aa24.54■■□□□ 1.52
PTPN6-210ENST00000538318 UNC5CLQ8IV45 518 aa24.53■■□□□ 1.52
PTPN6-210ENST00000538318 PMFBP1Q8TBY8 1022 aa24.5■■□□□ 1.51
PTPN6-210ENST00000538318 HIRIP3Q9BW71 556 aaPredicted RBP24.49■■□□□ 1.51
PTPN6-210ENST00000538318 ARHGEF10O15013 1369 aa24.49■■□□□ 1.51
PTPN6-210ENST00000538318 EP400Q96L91 3159 aa24.49■■□□□ 1.51
PTPN6-210ENST00000538318 HAP1P54257 671 aaPredicted RBP24.48■■□□□ 1.51
PTPN6-210ENST00000538318 CABLES1Q8TDN4 633 aa24.48■■□□□ 1.51
PTPN6-210ENST00000538318 GLI3P10071 1580 aa24.47■■□□□ 1.51
PTPN6-210ENST00000538318 RALGAPBQ86X10 1494 aa24.47■■□□□ 1.51
PTPN6-210ENST00000538318 ABCA3Q99758 1704 aa24.47■■□□□ 1.51
PTPN6-210ENST00000538318 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
PTPN6-210ENST00000538318 MINK1Q8N4C8 1332 aaPredicted RBP24.46■■□□□ 1.51
PTPN6-210ENST00000538318 LMOD2Q6P5Q4 547 aa24.46■■□□□ 1.51
PTPN6-210ENST00000538318 PRR36Q9H6K5 1346 aa24.45■■□□□ 1.5
PTPN6-210ENST00000538318 WASLO00401 505 aaPredicted RBP24.45■■□□□ 1.5
PTPN6-210ENST00000538318 TULP4Q9NRJ4 1543 aa24.45■■□□□ 1.5
PTPN6-210ENST00000538318 TRPM3Q9HCF6 1732 aaPredicted RBP24.44■■□□□ 1.5
PTPN6-210ENST00000538318 NWD2Q9ULI1 1742 aa24.44■■□□□ 1.5
PTPN6-210ENST00000538318 CCDC125Q86Z20 511 aa24.43■■□□□ 1.5
PTPN6-210ENST00000538318 PLCH1Q4KWH8 1693 aa24.43■■□□□ 1.5
PTPN6-210ENST00000538318 VPS72Q15906 364 aa24.42■■□□□ 1.5
PTPN6-210ENST00000538318 ARHGEF28Q8N1W1 1705 aaKnown RBP24.41■■□□□ 1.5
PTPN6-210ENST00000538318 PLEKHG5O94827 1062 aa24.41■■□□□ 1.5
PTPN6-210ENST00000538318 GPRASP1Q5JY77 1395 aa24.41■■□□□ 1.5
PTPN6-210ENST00000538318 ALS2Q96Q42 1657 aa24.4■■□□□ 1.5
PTPN6-210ENST00000538318 FAM83GA6ND36 823 aa24.39■■□□□ 1.49
PTPN6-210ENST00000538318 BRWD3Q6RI45 1802 aa24.38■■□□□ 1.49
PTPN6-210ENST00000538318 ONECUT3O60422 494 aaPredicted RBP24.37■■□□□ 1.49
PTPN6-210ENST00000538318 SEPT12Q8IYM1 358 aa24.36■■□□□ 1.49
PTPN6-210ENST00000538318 NGDNQ8NEJ9 315 aaKnown RBP24.35■■□□□ 1.49
PTPN6-210ENST00000538318 ATP7BP35670 1465 aa24.34■■□□□ 1.49
PTPN6-210ENST00000538318 ITSN1Q15811 1721 aa24.34■■□□□ 1.49
PTPN6-210ENST00000538318 KIAA1210Q9ULL0 1709 aa24.33■■□□□ 1.49
PTPN6-210ENST00000538318 NUDT16Q96DE0 195 aaKnown RBP24.33■■□□□ 1.49
PTPN6-210ENST00000538318 CCDC9Q9Y3X0 531 aaKnown RBP24.33■■□□□ 1.49
PTPN6-210ENST00000538318 NRAPQ86VF7 1730 aa24.32■■□□□ 1.48
PTPN6-210ENST00000538318 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms