RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
CIT-209ENST00000538073 CPS1P31327 1500 aa11.44□□□□□ -0.58
CIT-209ENST00000538073 DLC1Q96QB1 1528 aa11.44□□□□□ -0.58
CIT-209ENST00000538073 KCNA6P17658 529 aa11.43□□□□□ -0.58
CIT-209ENST00000538073 NKTRP30414 1462 aaKnown RBP11.43□□□□□ -0.58
CIT-209ENST00000538073 ARHGEF28Q8N1W1 1705 aaKnown RBP11.43□□□□□ -0.58
CIT-209ENST00000538073 SP7Q8TDD2 431 aaPredicted RBP11.42□□□□□ -0.58
CIT-209ENST00000538073 AMOTL2Q9Y2J4 779 aa11.42□□□□□ -0.58
CIT-209ENST00000538073 PTCH1Q13635 1447 aa11.42□□□□□ -0.58
CIT-209ENST00000538073 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
CIT-209ENST00000538073 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
CIT-209ENST00000538073 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
CIT-209ENST00000538073 LTBP4Q8N2S1 1624 aa11.41□□□□□ -0.58
CIT-209ENST00000538073 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
CIT-209ENST00000538073 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
CIT-209ENST00000538073 ROBO2Q9HCK4 1378 aa11.4□□□□□ -0.59
CIT-209ENST00000538073 TRAK1Q9UPV9 953 aa11.39□□□□□ -0.59
CIT-209ENST00000538073 ATF5Q9Y2D1 282 aaPredicted RBP11.39□□□□□ -0.59
CIT-209ENST00000538073 STK26Q9P289 416 aa11.38□□□□□ -0.59
CIT-209ENST00000538073 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
CIT-209ENST00000538073 LRRC7Q96NW7 1537 aa11.37□□□□□ -0.59
CIT-209ENST00000538073 EIF3AQ14152 1382 aaKnown RBP11.37□□□□□ -0.59
CIT-209ENST00000538073 USP47Q96K76 1375 aa11.37□□□□□ -0.59
CIT-209ENST00000538073 NCOA3Q9Y6Q9 1424 aa11.36□□□□□ -0.59
CIT-209ENST00000538073 PLEKHH1Q9ULM0 1364 aa11.36□□□□□ -0.59
CIT-209ENST00000538073 QRICH2Q9H0J4 1663 aa11.36□□□□□ -0.59
CIT-209ENST00000538073 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.35□□□□□ -0.59
CIT-209ENST00000538073 WAPLQ7Z5K2 1190 aa11.35□□□□□ -0.59
CIT-209ENST00000538073 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
CIT-209ENST00000538073 PRAM1Q96QH2 718 aa11.35□□□□□ -0.59
CIT-209ENST00000538073 SBNO2Q9Y2G9 1366 aa11.35□□□□□ -0.59
CIT-209ENST00000538073 NALCNQ8IZF0 1738 aa11.35□□□□□ -0.59
CIT-209ENST00000538073 CENPJQ9HC77 1338 aaPredicted RBP11.35□□□□□ -0.59
CIT-209ENST00000538073 ADGRB2O60241 1585 aa11.34□□□□□ -0.59
CIT-209ENST00000538073 TMEM94Q12767 1356 aa11.34□□□□□ -0.59
CIT-209ENST00000538073 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
CIT-209ENST00000538073 REM2Q8IYK8 340 aaPredicted RBP11.34□□□□□ -0.59
CIT-209ENST00000538073 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
CIT-209ENST00000538073 ST20-MTHFSA0A0A6YYL1 179 aa11.33□□□□□ -0.6
CIT-209ENST00000538073 PIP4P2Q8N4L2 257 aa11.33□□□□□ -0.6
CIT-209ENST00000538073 POGKQ9P215 609 aa11.33□□□□□ -0.6
CIT-209ENST00000538073 ADGRL3Q9HAR2 1447 aa11.33□□□□□ -0.6
CIT-209ENST00000538073 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
CIT-209ENST00000538073 TESK2Q96S53 571 aa11.32□□□□□ -0.6
CIT-209ENST00000538073 CDC42BPGQ6DT37 1551 aa11.31□□□□□ -0.6
CIT-209ENST00000538073 IQSEC2Q5JU85 1478 aa11.31□□□□□ -0.6
CIT-209ENST00000538073 TULP4Q9NRJ4 1543 aa11.3□□□□□ -0.6
CIT-209ENST00000538073 DCCP43146 1447 aa11.3□□□□□ -0.6
CIT-209ENST00000538073 SAFB2Q14151 953 aaKnown RBP eCLIP11.3□□□□□ -0.6
CIT-209ENST00000538073 CERKQ8TCT0 537 aa11.3□□□□□ -0.6
CIT-209ENST00000538073 FBXO41Q8TF61 875 aa11.3□□□□□ -0.6
CIT-209ENST00000538073 RBM33Q96EV2 1170 aaKnown RBP11.3□□□□□ -0.6
CIT-209ENST00000538073 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
CIT-209ENST00000538073 C19orf44Q9H6X5 657 aa11.29□□□□□ -0.6
CIT-209ENST00000538073 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
CIT-209ENST00000538073 FMN2Q9NZ56 1722 aa11.29□□□□□ -0.6
CIT-209ENST00000538073 MSH6P52701 1360 aa11.28□□□□□ -0.6
CIT-209ENST00000538073 WASLO00401 505 aaPredicted RBP11.27□□□□□ -0.61
CIT-209ENST00000538073 HIRIP3Q9BW71 556 aaPredicted RBP11.27□□□□□ -0.61
CIT-209ENST00000538073 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
CIT-209ENST00000538073 USP32Q8NFA0 1604 aa11.26□□□□□ -0.61
CIT-209ENST00000538073 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
CIT-209ENST00000538073 DISP3Q9P2K9 1392 aa11.26□□□□□ -0.61
CIT-209ENST00000538073 HAX1O00165 279 aa11.25□□□□□ -0.61
CIT-209ENST00000538073 TMF1P82094 1093 aa11.25□□□□□ -0.61
CIT-209ENST00000538073 PUS7Q96PZ0 661 aaKnown RBP11.25□□□□□ -0.61
CIT-209ENST00000538073 CDK19Q9BWU1 502 aa11.25□□□□□ -0.61
CIT-209ENST00000538073 MST1RQ04912 1400 aa11.25□□□□□ -0.61
CIT-209ENST00000538073 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
CIT-209ENST00000538073 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
CIT-209ENST00000538073 ANKARQ7Z5J8 1434 aa11.24□□□□□ -0.61
CIT-209ENST00000538073 ATP7BP35670 1465 aa11.24□□□□□ -0.61
CIT-209ENST00000538073 TOPAZ1Q8N9V7 1692 aa11.24□□□□□ -0.61
CIT-209ENST00000538073 C11orf95C9JLR9 678 aaPredicted RBP11.23□□□□□ -0.61
CIT-209ENST00000538073 ATF3P18847 181 aa11.23□□□□□ -0.61
CIT-209ENST00000538073 PRR36Q9H6K5 1346 aa11.23□□□□□ -0.61
CIT-209ENST00000538073 C1orf167Q5SNV9 1468 aa11.23□□□□□ -0.61
CIT-209ENST00000538073 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
CIT-209ENST00000538073 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
CIT-209ENST00000538073 CABP2Q9NPB3 220 aa11.22□□□□□ -0.61
CIT-209ENST00000538073 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
CIT-209ENST00000538073 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
CIT-209ENST00000538073 CDCA8Q53HL2 280 aa11.21□□□□□ -0.61
CIT-209ENST00000538073 NUDT16Q96DE0 195 aaKnown RBP11.21□□□□□ -0.61
CIT-209ENST00000538073 MYOM1P52179 1685 aa11.2□□□□□ -0.62
CIT-209ENST00000538073 KIF7Q2M1P5 1343 aa11.2□□□□□ -0.62
CIT-209ENST00000538073 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
CIT-209ENST00000538073 CCDC7Q96M83 1385 aa11.19□□□□□ -0.62
CIT-209ENST00000538073 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
CIT-209ENST00000538073 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
CIT-209ENST00000538073 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
CIT-209ENST00000538073 KIF1AQ12756 1690 aa11.18□□□□□ -0.62
CIT-209ENST00000538073 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
CIT-209ENST00000538073 PPIP5K1Q6PFW1 1433 aa11.18□□□□□ -0.62
CIT-209ENST00000538073 NINLQ9Y2I6 1382 aa11.17□□□□□ -0.62
CIT-209ENST00000538073 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
CIT-209ENST00000538073 TOM1O60784 492 aa11.17□□□□□ -0.62
CIT-209ENST00000538073 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
CIT-209ENST00000538073 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
CIT-209ENST00000538073 ZNF316A6NFI3 1004 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms