RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 STK26Q9P289 416 aa20.73■□□□□ 0.91
MKS1-204ENST00000537529 A2ML1A8K2U0 1454 aa20.73■□□□□ 0.91
MKS1-204ENST00000537529 CGNL1Q0VF96 1302 aa20.73■□□□□ 0.91
MKS1-204ENST00000537529 NSD2O96028 1365 aa20.72■□□□□ 0.91
MKS1-204ENST00000537529 PLEKHH1Q9ULM0 1364 aa20.72■□□□□ 0.91
MKS1-204ENST00000537529 MLECQ14165 292 aa20.71■□□□□ 0.91
MKS1-204ENST00000537529 CCDC136Q96JN2 1154 aa20.71■□□□□ 0.91
MKS1-204ENST00000537529 RBM19Q9Y4C8 960 aaKnown RBP20.7■□□□□ 0.9
MKS1-204ENST00000537529 CABP2Q9NPB3 220 aa20.69■□□□□ 0.9
MKS1-204ENST00000537529 ZNF521Q96K83 1311 aa20.69■□□□□ 0.9
MKS1-204ENST00000537529 RIMS2Q9UQ26 1411 aa20.69■□□□□ 0.9
MKS1-204ENST00000537529 SAFB2Q14151 953 aaKnown RBP eCLIP20.69■□□□□ 0.9
MKS1-204ENST00000537529 ATAD2Q6PL18 1390 aa20.68■□□□□ 0.9
MKS1-204ENST00000537529 ESF1Q9H501 851 aaKnown RBP20.68■□□□□ 0.9
MKS1-204ENST00000537529 POGKQ9P215 609 aa20.68■□□□□ 0.9
MKS1-204ENST00000537529 PRAM1Q96QH2 718 aa20.68■□□□□ 0.9
MKS1-204ENST00000537529 NGEFQ8N5V2 710 aa20.67■□□□□ 0.9
MKS1-204ENST00000537529 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
MKS1-204ENST00000537529 SRPK2P78362 688 aaKnown RBP20.66■□□□□ 0.9
MKS1-204ENST00000537529 GOLGA2Q08379 1002 aa20.66■□□□□ 0.9
MKS1-204ENST00000537529 CCDC146Q8IYE0 955 aa20.66■□□□□ 0.9
MKS1-204ENST00000537529 DLC1Q96QB1 1528 aa20.66■□□□□ 0.9
MKS1-204ENST00000537529 MINK1Q8N4C8 1332 aaPredicted RBP20.64■□□□□ 0.89
MKS1-204ENST00000537529 ZMYM3Q14202 1370 aa20.64■□□□□ 0.89
MKS1-204ENST00000537529 SHPRHQ149N8 1683 aa20.63■□□□□ 0.89
MKS1-204ENST00000537529 DUSP27Q5VZP5 1158 aa20.63■□□□□ 0.89
MKS1-204ENST00000537529 APAF1O14727 1248 aa20.62■□□□□ 0.89
MKS1-204ENST00000537529 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
MKS1-204ENST00000537529 CFAP53Q96M91 514 aa20.62■□□□□ 0.89
MKS1-204ENST00000537529 A0A1W2PP64 1363 aa20.62■□□□□ 0.89
MKS1-204ENST00000537529 ABCC11Q96J66 1382 aa20.62■□□□□ 0.89
MKS1-204ENST00000537529 TNNT2P45379 298 aaPredicted RBP20.62■□□□□ 0.89
MKS1-204ENST00000537529 SETD1AO15047 1707 aaKnown RBP20.61■□□□□ 0.89
MKS1-204ENST00000537529 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
MKS1-204ENST00000537529 TERF2IPQ9NYB0 399 aa20.61■□□□□ 0.89
MKS1-204ENST00000537529 SLFN5Q08AF3 891 aa20.6■□□□□ 0.89
MKS1-204ENST00000537529 TNRQ92752 1358 aa20.58■□□□□ 0.89
MKS1-204ENST00000537529 MTHFSP49914 203 aa20.57■□□□□ 0.88
MKS1-204ENST00000537529 TRMT2AQ8IZ69 625 aaKnown RBP20.57■□□□□ 0.88
MKS1-204ENST00000537529 MED14O60244 1454 aa20.56■□□□□ 0.88
MKS1-204ENST00000537529 HDGFP51858 240 aaKnown RBP20.56■□□□□ 0.88
MKS1-204ENST00000537529 CDK19Q9BWU1 502 aa20.56■□□□□ 0.88
MKS1-204ENST00000537529 NRXN3Q9Y4C0 1643 aa20.56■□□□□ 0.88
MKS1-204ENST00000537529 CD163L1Q9NR16 1453 aa20.56■□□□□ 0.88
MKS1-204ENST00000537529 E9PSI1 815 aa20.55■□□□□ 0.88
MKS1-204ENST00000537529 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
MKS1-204ENST00000537529 RUNDC1Q96C34 613 aa20.55■□□□□ 0.88
MKS1-204ENST00000537529 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
MKS1-204ENST00000537529 ANKRD26Q9UPS8 1709 aa20.54■□□□□ 0.88
MKS1-204ENST00000537529 PLIN1O60240 522 aa20.54■□□□□ 0.88
MKS1-204ENST00000537529 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
MKS1-204ENST00000537529 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.52■□□□□ 0.88
MKS1-204ENST00000537529 ATP7BP35670 1465 aa20.5■□□□□ 0.87
MKS1-204ENST00000537529 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
MKS1-204ENST00000537529 CRBNQ96SW2 442 aa20.5■□□□□ 0.87
MKS1-204ENST00000537529 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
MKS1-204ENST00000537529 WAPLQ7Z5K2 1190 aa20.49■□□□□ 0.87
MKS1-204ENST00000537529 GGNBP2Q9H3C7 697 aa20.49■□□□□ 0.87
MKS1-204ENST00000537529 FANCIQ9NVI1 1328 aa20.49■□□□□ 0.87
MKS1-204ENST00000537529 WWC1Q8IX03 1113 aa20.49■□□□□ 0.87
MKS1-204ENST00000537529 METP08581 1390 aa20.48■□□□□ 0.87
MKS1-204ENST00000537529 UBR1Q8IWV7 1749 aa20.48■□□□□ 0.87
MKS1-204ENST00000537529 SPINK5Q9NQ38 1064 aaPredicted RBP20.48■□□□□ 0.87
MKS1-204ENST00000537529 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
MKS1-204ENST00000537529 TMEM2Q9UHN6 1383 aa20.48■□□□□ 0.87
MKS1-204ENST00000537529 TECPR2O15040 1411 aa20.47■□□□□ 0.87
MKS1-204ENST00000537529 FYB1O15117 783 aa20.47■□□□□ 0.87
MKS1-204ENST00000537529 FAM135BQ49AJ0 1406 aa20.47■□□□□ 0.87
MKS1-204ENST00000537529 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
MKS1-204ENST00000537529 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
MKS1-204ENST00000537529 TCP11L2Q8N4U5 519 aa20.46■□□□□ 0.87
MKS1-204ENST00000537529 SIRT1Q96EB6 747 aa20.46■□□□□ 0.87
MKS1-204ENST00000537529 CPS1P31327 1500 aa20.46■□□□□ 0.87
MKS1-204ENST00000537529 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
MKS1-204ENST00000537529 U2AF1L5P0DN76 240 aaPredicted RBP20.44■□□□□ 0.86
MKS1-204ENST00000537529 U2AF1Q01081 240 aaKnown RBP eCLIP20.44■□□□□ 0.86
MKS1-204ENST00000537529 CCDC27Q2M243 656 aa20.44■□□□□ 0.86
MKS1-204ENST00000537529 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
MKS1-204ENST00000537529 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
MKS1-204ENST00000537529 ADGRB2O60241 1585 aa20.43■□□□□ 0.86
MKS1-204ENST00000537529 WASLO00401 505 aaPredicted RBP20.43■□□□□ 0.86
MKS1-204ENST00000537529 C20orf194Q5TEA3 1177 aa20.43■□□□□ 0.86
MKS1-204ENST00000537529 WDR63Q8IWG1 891 aa20.43■□□□□ 0.86
MKS1-204ENST00000537529 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
MKS1-204ENST00000537529 NEUROD2Q15784 382 aa20.41■□□□□ 0.86
MKS1-204ENST00000537529 TXNDC2Q86VQ3 553 aa20.41■□□□□ 0.86
MKS1-204ENST00000537529 PPIP5K1Q6PFW1 1433 aa20.4■□□□□ 0.86
MKS1-204ENST00000537529 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
MKS1-204ENST00000537529 EDC4Q6P2E9 1401 aaKnown RBP20.39■□□□□ 0.85
MKS1-204ENST00000537529 CPSF1Q10570 1443 aaKnown RBP20.39■□□□□ 0.85
MKS1-204ENST00000537529 ADAMTS13Q76LX8 1427 aa20.38■□□□□ 0.85
MKS1-204ENST00000537529 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
MKS1-204ENST00000537529 U2SURPO15042 1029 aaKnown RBP20.38■□□□□ 0.85
MKS1-204ENST00000537529 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
MKS1-204ENST00000537529 PNPLA6Q8IY17 1366 aa20.37■□□□□ 0.85
MKS1-204ENST00000537529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.85
MKS1-204ENST00000537529 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
MKS1-204ENST00000537529 NUDT16Q96DE0 195 aaKnown RBP20.35■□□□□ 0.85
MKS1-204ENST00000537529 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
MKS1-204ENST00000537529 BCAR3O75815 825 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms