RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
POLR1B-216ENST00000537335 GBP3Q9H0R5 595 aa14.15□□□□□ -0.14
POLR1B-216ENST00000537335 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.15□□□□□ -0.14
POLR1B-216ENST00000537335 CDC45O75419 566 aa14.15□□□□□ -0.14
POLR1B-216ENST00000537335 MCM2P49736 904 aa14.15□□□□□ -0.14
POLR1B-216ENST00000537335 NAP1L1P55209 391 aaKnown RBP14.15□□□□□ -0.14
POLR1B-216ENST00000537335 BMS1Q14692 1282 aaKnown RBP14.15□□□□□ -0.14
POLR1B-216ENST00000537335 DZIP1LQ8IYY4 767 aaKnown RBP14.15□□□□□ -0.14
POLR1B-216ENST00000537335 MYO6Q9UM54 1294 aa14.15□□□□□ -0.14
POLR1B-216ENST00000537335 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
POLR1B-216ENST00000537335 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.14□□□□□ -0.15
POLR1B-216ENST00000537335 DHX37Q8IY37 1157 aaKnown RBP14.14□□□□□ -0.15
POLR1B-216ENST00000537335 TRIM34Q9BYJ4 488 aa14.14□□□□□ -0.15
POLR1B-216ENST00000537335 LNPKQ9C0E8 428 aa14.14□□□□□ -0.15
POLR1B-216ENST00000537335 PTPN14Q15678 1187 aa14.14□□□□□ -0.15
POLR1B-216ENST00000537335 SLC4A10Q6U841 1118 aa14.14□□□□□ -0.15
POLR1B-216ENST00000537335 KIF18AQ8NI77 898 aa14.14□□□□□ -0.15
POLR1B-216ENST00000537335 CPLX2Q6PUV4 134 aaKnown RBP14.13□□□□□ -0.15
POLR1B-216ENST00000537335 NF2P35240 595 aa14.13□□□□□ -0.15
POLR1B-216ENST00000537335 VGLL3A8MV65 326 aa14.12□□□□□ -0.15
POLR1B-216ENST00000537335 K7ELQ4 463 aaPredicted RBP14.12□□□□□ -0.15
POLR1B-216ENST00000537335 KINO60870 393 aaKnown RBP14.12□□□□□ -0.15
POLR1B-216ENST00000537335 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 MICALCLQ6ZW33 695 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 SMARCE1Q969G3 411 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 NACADO15069 1562 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 FIBPO43427 364 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 A0A0G2JS52 829 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 CCDC91Q7Z6B0 441 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 CCDC47Q96A33 483 aaKnown RBP14.11□□□□□ -0.15
POLR1B-216ENST00000537335 MPHOSPH9Q99550 1183 aa14.11□□□□□ -0.15
POLR1B-216ENST00000537335 SENP3Q9H4L4 574 aaPredicted RBP14.11□□□□□ -0.15
POLR1B-216ENST00000537335 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
POLR1B-216ENST00000537335 CRACR2AQ9BSW2 395 aa14.1□□□□□ -0.15
POLR1B-216ENST00000537335 TOMM22Q9NS69 142 aa14.1□□□□□ -0.15
POLR1B-216ENST00000537335 LMAN1P49257 510 aa14.1□□□□□ -0.15
POLR1B-216ENST00000537335 RASSF4Q9H2L5 321 aa14.1□□□□□ -0.15
POLR1B-216ENST00000537335 FAM193AP78312 1265 aa14.09□□□□□ -0.15
POLR1B-216ENST00000537335 FMNL2Q96PY5 1086 aa14.09□□□□□ -0.15
POLR1B-216ENST00000537335 IVLP07476 585 aa14.09□□□□□ -0.15
POLR1B-216ENST00000537335 SYCE3A1L190 88 aa14.09□□□□□ -0.15
POLR1B-216ENST00000537335 FOXD1Q16676 465 aa14.09□□□□□ -0.15
POLR1B-216ENST00000537335 PAIP2Q9BPZ3 127 aaKnown RBP14.09□□□□□ -0.15
POLR1B-216ENST00000537335 XRCC6P12956 609 aaKnown RBP eCLIP14.08□□□□□ -0.16
POLR1B-216ENST00000537335 TRIM29Q14134 588 aa14.08□□□□□ -0.16
POLR1B-216ENST00000537335 FAM177A1Q8N128 213 aaPredicted RBP14.08□□□□□ -0.16
POLR1B-216ENST00000537335 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
POLR1B-216ENST00000537335 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
POLR1B-216ENST00000537335 CCDC27Q2M243 656 aa14.08□□□□□ -0.16
POLR1B-216ENST00000537335 SYNE3Q6ZMZ3 975 aa14.08□□□□□ -0.16
POLR1B-216ENST00000537335 APAF1O14727 1248 aa14.08□□□□□ -0.16
POLR1B-216ENST00000537335 OFD1O75665 1012 aa14.08□□□□□ -0.16
POLR1B-216ENST00000537335 PDCP20941 246 aa14.08□□□□□ -0.16
POLR1B-216ENST00000537335 NEK4P51957 841 aa14.08□□□□□ -0.16
POLR1B-216ENST00000537335 SARNPP82979 210 aaKnown RBP14.07□□□□□ -0.16
POLR1B-216ENST00000537335 TNMDQ9H2S6 317 aa14.07□□□□□ -0.16
POLR1B-216ENST00000537335 PKD2Q13563 968 aa14.07□□□□□ -0.16
POLR1B-216ENST00000537335 TTC31Q49AM3 519 aaPredicted RBP14.07□□□□□ -0.16
POLR1B-216ENST00000537335 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
POLR1B-216ENST00000537335 WDR33Q9C0J8 1336 aaKnown RBP14.07□□□□□ -0.16
POLR1B-216ENST00000537335 ODF2Q5BJF6 829 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 KIAA1328Q86T90 577 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
POLR1B-216ENST00000537335 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 CPLX1O14810 134 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 ERLIN2O94905 339 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 GBP2P32456 591 aaPredicted RBP14.06□□□□□ -0.16
POLR1B-216ENST00000537335 FILIP1LQ4L180 1135 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 PRM3Q9NNZ6 103 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 WWC1Q8IX03 1113 aa14.06□□□□□ -0.16
POLR1B-216ENST00000537335 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
POLR1B-216ENST00000537335 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
POLR1B-216ENST00000537335 FMN1Q68DA7 1419 aa14.05□□□□□ -0.16
POLR1B-216ENST00000537335 AKNAQ7Z591 1439 aa14.05□□□□□ -0.16
POLR1B-216ENST00000537335 RNF187Q5TA31 235 aaPredicted RBP14.05□□□□□ -0.16
POLR1B-216ENST00000537335 IQCEQ6IPM2 695 aa14.05□□□□□ -0.16
POLR1B-216ENST00000537335 PANK1Q8TE04 598 aa14.05□□□□□ -0.16
POLR1B-216ENST00000537335 SERPINC1P01008 464 aa14.04□□□□□ -0.16
POLR1B-216ENST00000537335 SRPK2P78362 688 aaKnown RBP14.04□□□□□ -0.16
POLR1B-216ENST00000537335 AKAP17AQ02040 695 aaKnown RBP14.04□□□□□ -0.16
POLR1B-216ENST00000537335 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
POLR1B-216ENST00000537335 JAKMIP3Q5VZ66 844 aa14.04□□□□□ -0.16
POLR1B-216ENST00000537335 CLASRPQ8N2M8 674 aaKnown RBP14.04□□□□□ -0.16
POLR1B-216ENST00000537335 FEZ1Q99689 392 aa14.04□□□□□ -0.16
POLR1B-216ENST00000537335 RBM33Q96EV2 1170 aaKnown RBP14.04□□□□□ -0.16
POLR1B-216ENST00000537335 SPAG9O60271 1321 aaKnown RBP14.04□□□□□ -0.16
POLR1B-216ENST00000537335 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
POLR1B-216ENST00000537335 C16orf45Q96MC5 204 aaPredicted RBP14.03□□□□□ -0.16
POLR1B-216ENST00000537335 IGSF3O75054 1194 aa14.03□□□□□ -0.16
POLR1B-216ENST00000537335 PAXBP1Q9Y5B6 917 aa14.03□□□□□ -0.16
POLR1B-216ENST00000537335 LUZP1Q86V48 1076 aa14.03□□□□□ -0.16
POLR1B-216ENST00000537335 CPSF2Q9P2I0 782 aaKnown RBP14.03□□□□□ -0.16
POLR1B-216ENST00000537335 WASHC2CQ9Y4E1 1318 aa14.03□□□□□ -0.16
POLR1B-216ENST00000537335 C10orf67Q8IYJ2 551 aa14.02□□□□□ -0.16
POLR1B-216ENST00000537335 CBFA2T2O43439 604 aa14.02□□□□□ -0.16
POLR1B-216ENST00000537335 URI1O94763 535 aaPredicted RBP14.02□□□□□ -0.16
POLR1B-216ENST00000537335 CCDC181Q5TID7 509 aa14.02□□□□□ -0.17
POLR1B-216ENST00000537335 OGFRQ9NZT2 677 aa14.02□□□□□ -0.17
POLR1B-216ENST00000537335 ARHGAP35Q9NRY4 1499 aa14.01□□□□□ -0.17
POLR1B-216ENST00000537335 MARCH6O60337 910 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms