RNA–Protein interactions for RNA: ENST00000537304.5

LMO3-215, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 1,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-215ENST00000537304 PLA2R1Q13018 1463 aa13.67□□□□□ -0.22
LMO3-215ENST00000537304 DUOX2Q9NRD8 1548 aa13.66□□□□□ -0.22
LMO3-215ENST00000537304 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
LMO3-215ENST00000537304 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
LMO3-215ENST00000537304 APAF1O14727 1248 aa13.66□□□□□ -0.22
LMO3-215ENST00000537304 RGL3Q3MIN7 710 aa13.65□□□□□ -0.22
LMO3-215ENST00000537304 EFCAB2Q5VUJ9 269 aa13.65□□□□□ -0.22
LMO3-215ENST00000537304 C22orf23Q9BZE7 217 aa13.65□□□□□ -0.22
LMO3-215ENST00000537304 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
LMO3-215ENST00000537304 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
LMO3-215ENST00000537304 CCDC173Q0VFZ6 552 aa13.64□□□□□ -0.23
LMO3-215ENST00000537304 COG6Q9Y2V7 657 aa13.64□□□□□ -0.23
LMO3-215ENST00000537304 POLR3AO14802 1390 aaPredicted RBP13.64□□□□□ -0.23
LMO3-215ENST00000537304 CT47B1P0C2W7 299 aaPredicted RBP13.63□□□□□ -0.23
LMO3-215ENST00000537304 SNX21Q969T3 373 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 KIAA1210Q9ULL0 1709 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 KANK1Q14678 1352 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 ABCA9Q8IUA7 1624 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 MYOM1P52179 1685 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
LMO3-215ENST00000537304 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
LMO3-215ENST00000537304 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
LMO3-215ENST00000537304 ASXL2Q76L83 1435 aa13.62□□□□□ -0.23
LMO3-215ENST00000537304 GOLGA6L22H0YM25 854 aa13.62□□□□□ -0.23
LMO3-215ENST00000537304 MTERF4Q7Z6M4 381 aaKnown RBP13.62□□□□□ -0.23
LMO3-215ENST00000537304 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
LMO3-215ENST00000537304 ABCC1P33527 1531 aa13.61□□□□□ -0.23
LMO3-215ENST00000537304 CALD1Q05682 793 aaKnown RBP13.61□□□□□ -0.23
LMO3-215ENST00000537304 PANK1Q8TE04 598 aa13.61□□□□□ -0.23
LMO3-215ENST00000537304 SPHKAPQ2M3C7 1700 aa13.6□□□□□ -0.23
LMO3-215ENST00000537304 RARSP54136 660 aaKnown RBP13.6□□□□□ -0.23
LMO3-215ENST00000537304 HS1BP3Q53T59 392 aa13.6□□□□□ -0.23
LMO3-215ENST00000537304 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
LMO3-215ENST00000537304 NPM1P06748 294 aaKnown RBP eCLIP13.59□□□□□ -0.23
LMO3-215ENST00000537304 WWC1Q8IX03 1113 aa13.59□□□□□ -0.23
LMO3-215ENST00000537304 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
LMO3-215ENST00000537304 RTEL1-TNFRSF6BF6WH68 1400 aa13.59□□□□□ -0.23
LMO3-215ENST00000537304 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
LMO3-215ENST00000537304 NEURL4Q96JN8 1562 aa13.59□□□□□ -0.23
LMO3-215ENST00000537304 PPP1R9BQ96SB3 815 aa13.59□□□□□ -0.23
LMO3-215ENST00000537304 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
LMO3-215ENST00000537304 ZSCAN30Q86W11 494 aa13.58□□□□□ -0.24
LMO3-215ENST00000537304 ARXQ96QS3 562 aa13.58□□□□□ -0.24
LMO3-215ENST00000537304 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
LMO3-215ENST00000537304 DDIT3P35638 169 aa13.57□□□□□ -0.24
LMO3-215ENST00000537304 RBM25P49756 843 aaKnown RBP13.57□□□□□ -0.24
LMO3-215ENST00000537304 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
LMO3-215ENST00000537304 RUNDC1Q96C34 613 aa13.57□□□□□ -0.24
LMO3-215ENST00000537304 OFD1O75665 1012 aa13.56□□□□□ -0.24
LMO3-215ENST00000537304 MSNP26038 577 aaKnown RBP13.56□□□□□ -0.24
LMO3-215ENST00000537304 MVPQ14764 893 aaKnown RBP13.56□□□□□ -0.24
LMO3-215ENST00000537304 PCDHB15Q9Y5E8 787 aa13.56□□□□□ -0.24
LMO3-215ENST00000537304 CEP152O94986 1710 aa13.56□□□□□ -0.24
LMO3-215ENST00000537304 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
LMO3-215ENST00000537304 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
LMO3-215ENST00000537304 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
LMO3-215ENST00000537304 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
LMO3-215ENST00000537304 HSP90AB1P08238 724 aaKnown RBP13.55□□□□□ -0.24
LMO3-215ENST00000537304 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
LMO3-215ENST00000537304 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
LMO3-215ENST00000537304 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
LMO3-215ENST00000537304 TRPM2O94759 1503 aa13.55□□□□□ -0.24
LMO3-215ENST00000537304 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
LMO3-215ENST00000537304 FANCAO15360 1455 aa13.54□□□□□ -0.24
LMO3-215ENST00000537304 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
LMO3-215ENST00000537304 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
LMO3-215ENST00000537304 KIAA1211Q6ZU35 1233 aa13.53□□□□□ -0.24
LMO3-215ENST00000537304 FTSJ3Q8IY81 847 aaKnown RBP13.53□□□□□ -0.24
LMO3-215ENST00000537304 REREQ9P2R6 1566 aa13.53□□□□□ -0.24
LMO3-215ENST00000537304 DDX19BQ9UMR2 479 aa13.53□□□□□ -0.24
LMO3-215ENST00000537304 ARHGAP31Q2M1Z3 1444 aa13.53□□□□□ -0.24
LMO3-215ENST00000537304 ERBB4Q15303 1308 aa13.52□□□□□ -0.24
LMO3-215ENST00000537304 MCM5P33992 734 aa13.52□□□□□ -0.25
LMO3-215ENST00000537304 NASPP49321 788 aaPredicted RBP13.52□□□□□ -0.25
LMO3-215ENST00000537304 DZIP1LQ8IYY4 767 aaKnown RBP13.52□□□□□ -0.25
LMO3-215ENST00000537304 TNPO1Q92973 898 aaKnown RBP13.52□□□□□ -0.25
LMO3-215ENST00000537304 CFAP53Q96M91 514 aa13.52□□□□□ -0.25
LMO3-215ENST00000537304 CHMP4BQ9H444 224 aaKnown RBP13.52□□□□□ -0.25
LMO3-215ENST00000537304 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
LMO3-215ENST00000537304 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
LMO3-215ENST00000537304 SHPRHQ149N8 1683 aa13.51□□□□□ -0.25
LMO3-215ENST00000537304 USP32Q8NFA0 1604 aa13.5□□□□□ -0.25
LMO3-215ENST00000537304 SPAG9O60271 1321 aaKnown RBP13.5□□□□□ -0.25
LMO3-215ENST00000537304 KLHL40Q2TBA0 621 aa13.5□□□□□ -0.25
LMO3-215ENST00000537304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
LMO3-215ENST00000537304 ZFYVE16Q7Z3T8 1539 aa13.49□□□□□ -0.25
LMO3-215ENST00000537304 RIMBP3CA6NJZ7 1639 aa13.49□□□□□ -0.25
LMO3-215ENST00000537304 RIMBP3BA6NNM3 1639 aa13.49□□□□□ -0.25
LMO3-215ENST00000537304 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
LMO3-215ENST00000537304 RIMBP3Q9UFD9 1639 aa13.49□□□□□ -0.25
LMO3-215ENST00000537304 CFAP74Q9C0B2 1584 aa13.48□□□□□ -0.25
LMO3-215ENST00000537304 MYOM2P54296 1465 aa13.48□□□□□ -0.25
LMO3-215ENST00000537304 RLBP1P12271 317 aa13.48□□□□□ -0.25
LMO3-215ENST00000537304 AFAP1Q8N556 730 aa13.48□□□□□ -0.25
LMO3-215ENST00000537304 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
LMO3-215ENST00000537304 PTPRTO14522 1441 aa13.48□□□□□ -0.25
LMO3-215ENST00000537304 INO80Q9ULG1 1556 aaPredicted RBP13.48□□□□□ -0.25
LMO3-215ENST00000537304 ZNF500O60304 480 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms