RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 GRIPAP1Q4V328 841 aa13.93□□□□□ -0.18
CCDC7-208ENST00000537047 MSS51Q4VC12 460 aa13.92□□□□□ -0.18
CCDC7-208ENST00000537047 CLCN1P35523 988 aa13.91□□□□□ -0.18
CCDC7-208ENST00000537047 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
CCDC7-208ENST00000537047 ZC3H15Q8WU90 426 aaKnown RBP13.91□□□□□ -0.18
CCDC7-208ENST00000537047 HOXA2O43364 376 aa13.9□□□□□ -0.18
CCDC7-208ENST00000537047 ZMYND10O75800 440 aa13.89□□□□□ -0.19
CCDC7-208ENST00000537047 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
CCDC7-208ENST00000537047 SYMPKQ92797 1274 aaKnown RBP13.88□□□□□ -0.19
CCDC7-208ENST00000537047 POTECB2RU33 542 aa13.87□□□□□ -0.19
CCDC7-208ENST00000537047 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
CCDC7-208ENST00000537047 Q3C1V9 767 aa13.87□□□□□ -0.19
CCDC7-208ENST00000537047 USB1Q9BQ65 265 aaKnown RBP13.86□□□□□ -0.19
CCDC7-208ENST00000537047 MMP16P51512 607 aa13.84□□□□□ -0.19
CCDC7-208ENST00000537047 USP46P62068 366 aa13.84□□□□□ -0.19
CCDC7-208ENST00000537047 ZNF775Q96BV0 537 aaPredicted RBP13.84□□□□□ -0.19
CCDC7-208ENST00000537047 TOR4AQ9NXH8 423 aa13.84□□□□□ -0.19
CCDC7-208ENST00000537047 ST8SIA5O15466 376 aa13.83□□□□□ -0.2
CCDC7-208ENST00000537047 AAASQ9NRG9 546 aa13.83□□□□□ -0.2
CCDC7-208ENST00000537047 SSTR3P32745 418 aaPredicted RBP13.82□□□□□ -0.2
CCDC7-208ENST00000537047 ZBTB24O43167 697 aaPredicted RBP13.8□□□□□ -0.2
CCDC7-208ENST00000537047 DXOO77932 396 aaKnown RBP13.8□□□□□ -0.2
CCDC7-208ENST00000537047 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
CCDC7-208ENST00000537047 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
CCDC7-208ENST00000537047 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
CCDC7-208ENST00000537047 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
CCDC7-208ENST00000537047 AVPP01185 164 aa13.76□□□□□ -0.21
CCDC7-208ENST00000537047 NDUFV2P19404 249 aa13.76□□□□□ -0.21
CCDC7-208ENST00000537047 AMHR2Q16671 573 aa13.76□□□□□ -0.21
CCDC7-208ENST00000537047 GIGYF2Q6Y7W6 1299 aaKnown RBP13.76□□□□□ -0.21
CCDC7-208ENST00000537047 CCDC24Q8N4L8 307 aa13.76□□□□□ -0.21
CCDC7-208ENST00000537047 SPIRE2Q8WWL2 714 aa13.76□□□□□ -0.21
CCDC7-208ENST00000537047 TRIM32Q13049 653 aa13.75□□□□□ -0.21
CCDC7-208ENST00000537047 CRIPAKQ8N1N5 446 aa13.74□□□□□ -0.21
CCDC7-208ENST00000537047 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
CCDC7-208ENST00000537047 FDX1P10109 184 aa13.73□□□□□ -0.21
CCDC7-208ENST00000537047 MOXD2PA6NHM9 499 aa13.72□□□□□ -0.21
CCDC7-208ENST00000537047 WNT7AO00755 349 aa13.72□□□□□ -0.21
CCDC7-208ENST00000537047 JUNDP17535 347 aa13.7□□□□□ -0.22
CCDC7-208ENST00000537047 PARP9Q8IXQ6 854 aa13.7□□□□□ -0.22
CCDC7-208ENST00000537047 TTC24A2A3L6 582 aaPredicted RBP13.69□□□□□ -0.22
CCDC7-208ENST00000537047 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
CCDC7-208ENST00000537047 TRIM66O15016 1216 aa13.69□□□□□ -0.22
CCDC7-208ENST00000537047 RETREG3Q86VR2 466 aa13.69□□□□□ -0.22
CCDC7-208ENST00000537047 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
CCDC7-208ENST00000537047 PTCRAQ6ISU1 281 aaPredicted RBP13.68□□□□□ -0.22
CCDC7-208ENST00000537047 MRGPRX2Q96LB1 330 aa13.68□□□□□ -0.22
CCDC7-208ENST00000537047 AXIN1O15169 862 aa13.67□□□□□ -0.22
CCDC7-208ENST00000537047 MS4A1P11836 297 aa13.67□□□□□ -0.22
CCDC7-208ENST00000537047 SMPD1P17405 629 aa13.67□□□□□ -0.22
CCDC7-208ENST00000537047 SKOR1P84550 965 aa13.67□□□□□ -0.22
CCDC7-208ENST00000537047 SNIP1Q8TAD8 396 aaKnown RBP13.66□□□□□ -0.22
CCDC7-208ENST00000537047 SMCPP49901 116 aaPredicted RBP13.65□□□□□ -0.22
CCDC7-208ENST00000537047 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
CCDC7-208ENST00000537047 J3QL48 77 aa13.63□□□□□ -0.23
CCDC7-208ENST00000537047 NUDT12Q9BQG2 462 aa13.63□□□□□ -0.23
CCDC7-208ENST00000537047 TBC1D2Q9BYX2 928 aa13.63□□□□□ -0.23
CCDC7-208ENST00000537047 AK7Q96M32 723 aa13.62□□□□□ -0.23
CCDC7-208ENST00000537047 GMPR2Q9P2T1 348 aaKnown RBP13.62□□□□□ -0.23
CCDC7-208ENST00000537047 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
CCDC7-208ENST00000537047 WNT7BP56706 349 aa13.59□□□□□ -0.23
CCDC7-208ENST00000537047 PCDHB15Q9Y5E8 787 aa13.59□□□□□ -0.23
CCDC7-208ENST00000537047 PRR7Q8TB68 274 aa13.58□□□□□ -0.24
CCDC7-208ENST00000537047 SLC24A3Q9HC58 644 aa13.58□□□□□ -0.24
CCDC7-208ENST00000537047 MTMR2Q13614 643 aa13.56□□□□□ -0.24
CCDC7-208ENST00000537047 RSBN1LQ6PCB5 846 aaPredicted RBP13.56□□□□□ -0.24
CCDC7-208ENST00000537047 CCNYL3P0C7X3 344 aa13.55□□□□□ -0.24
CCDC7-208ENST00000537047 LCE2AQ5TA79 106 aaPredicted RBP13.55□□□□□ -0.24
CCDC7-208ENST00000537047 HPS1Q92902 700 aa13.55□□□□□ -0.24
CCDC7-208ENST00000537047 C11orf95C9JLR9 678 aaPredicted RBP13.54□□□□□ -0.24
CCDC7-208ENST00000537047 PDE4DQ08499 809 aa13.54□□□□□ -0.24
CCDC7-208ENST00000537047 TREML4Q6UXN2 200 aa13.53□□□□□ -0.24
CCDC7-208ENST00000537047 ATP13A2Q9NQ11 1180 aa13.52□□□□□ -0.25
CCDC7-208ENST00000537047 CFAP99D6REC4 459 aa13.51□□□□□ -0.25
CCDC7-208ENST00000537047 SH3BP2P78314 561 aa13.51□□□□□ -0.25
CCDC7-208ENST00000537047 PTPRNQ16849 979 aa13.51□□□□□ -0.25
CCDC7-208ENST00000537047 CSPP1Q1MSJ5 1256 aa13.51□□□□□ -0.25
CCDC7-208ENST00000537047 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
CCDC7-208ENST00000537047 UNC93B1Q9H1C4 597 aa13.51□□□□□ -0.25
CCDC7-208ENST00000537047 EVA1BQ9NVM1 165 aa13.51□□□□□ -0.25
CCDC7-208ENST00000537047 SPTLC1O15269 473 aa13.5□□□□□ -0.25
CCDC7-208ENST00000537047 LINC01559Q495D7 138 aa13.5□□□□□ -0.25
CCDC7-208ENST00000537047 SIAH2O43255 324 aa13.49□□□□□ -0.25
CCDC7-208ENST00000537047 HRCP23327 699 aa13.49□□□□□ -0.25
CCDC7-208ENST00000537047 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
CCDC7-208ENST00000537047 ALDH1A1P00352 501 aa13.48□□□□□ -0.25
CCDC7-208ENST00000537047 BAP1Q92560 729 aa13.48□□□□□ -0.25
CCDC7-208ENST00000537047 GJA5P36382 358 aa13.47□□□□□ -0.25
CCDC7-208ENST00000537047 KCNH2Q12809 1159 aa13.47□□□□□ -0.25
CCDC7-208ENST00000537047 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
CCDC7-208ENST00000537047 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
CCDC7-208ENST00000537047 SPDYE5A6NIY4 337 aa13.46□□□□□ -0.25
CCDC7-208ENST00000537047 SNRPBP14678 240 aaKnown RBP13.45□□□□□ -0.26
CCDC7-208ENST00000537047 MYSM1Q5VVJ2 828 aa13.45□□□□□ -0.26
CCDC7-208ENST00000537047 DESI1Q6ICB0 168 aa13.45□□□□□ -0.26
CCDC7-208ENST00000537047 DIXDC1Q155Q3 683 aa13.44□□□□□ -0.26
CCDC7-208ENST00000537047 QPCTQ16769 361 aa13.44□□□□□ -0.26
CCDC7-208ENST00000537047 LYPD8Q6UX82 237 aa13.43□□□□□ -0.26
CCDC7-208ENST00000537047 ZBTB3Q9H5J0 574 aa13.43□□□□□ -0.26
CCDC7-208ENST00000537047 TRIM47Q96LD4 638 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms