RNA–Protein interactions for RNA: ENST00000536821.5

TMED3-203, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2 BASIC

Gene TMED3, Length 2,265 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-203ENST00000536821 PRAM1Q96QH2 718 aa22.83■■□□□ 1.25
TMED3-203ENST00000536821 NPC1L1Q9UHC9 1359 aa22.83■■□□□ 1.25
TMED3-203ENST00000536821 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.24
TMED3-203ENST00000536821 TMEM2Q9UHN6 1383 aa22.82■■□□□ 1.24
TMED3-203ENST00000536821 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
TMED3-203ENST00000536821 POGKQ9P215 609 aa22.82■■□□□ 1.24
TMED3-203ENST00000536821 PLPPR3Q6T4P5 718 aa22.81■■□□□ 1.24
TMED3-203ENST00000536821 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
TMED3-203ENST00000536821 LRPPRCP42704 1394 aaKnown RBP22.8■■□□□ 1.24
TMED3-203ENST00000536821 SLC12A5Q9H2X9 1139 aa22.8■■□□□ 1.24
TMED3-203ENST00000536821 DLC1Q96QB1 1528 aa22.78■■□□□ 1.24
TMED3-203ENST00000536821 CABP2Q9NPB3 220 aa22.78■■□□□ 1.24
TMED3-203ENST00000536821 MINK1Q8N4C8 1332 aaPredicted RBP22.77■■□□□ 1.24
TMED3-203ENST00000536821 PPP2R1AP30153 589 aa22.76■■□□□ 1.23
TMED3-203ENST00000536821 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
TMED3-203ENST00000536821 SRPK2P78362 688 aaKnown RBP22.75■■□□□ 1.23
TMED3-203ENST00000536821 METP08581 1390 aa22.75■■□□□ 1.23
TMED3-203ENST00000536821 DEKP35659 375 aaKnown RBP22.74■■□□□ 1.23
TMED3-203ENST00000536821 NSD3Q9BZ95 1437 aa22.74■■□□□ 1.23
TMED3-203ENST00000536821 NOP58Q9Y2X3 529 aaKnown RBP22.73■■□□□ 1.23
TMED3-203ENST00000536821 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
TMED3-203ENST00000536821 WAPLQ7Z5K2 1190 aa22.71■■□□□ 1.23
TMED3-203ENST00000536821 LTKP29376 864 aa22.71■■□□□ 1.23
TMED3-203ENST00000536821 TXNDC2Q86VQ3 553 aa22.7■■□□□ 1.22
TMED3-203ENST00000536821 ANKRD36BQ8N2N9 1353 aa22.7■■□□□ 1.22
TMED3-203ENST00000536821 PLEKHG1Q9ULL1 1385 aa22.7■■□□□ 1.22
TMED3-203ENST00000536821 RNF123Q5XPI4 1314 aa22.7■■□□□ 1.22
TMED3-203ENST00000536821 ATAD2Q6PL18 1390 aa22.69■■□□□ 1.22
TMED3-203ENST00000536821 PLEKHH1Q9ULM0 1364 aa22.69■■□□□ 1.22
TMED3-203ENST00000536821 NINLQ9Y2I6 1382 aa22.69■■□□□ 1.22
TMED3-203ENST00000536821 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
TMED3-203ENST00000536821 RIMS1Q86UR5 1692 aaKnown RBP22.68■■□□□ 1.22
TMED3-203ENST00000536821 B4GALNT3Q6L9W6 998 aa22.68■■□□□ 1.22
TMED3-203ENST00000536821 CDK19Q9BWU1 502 aa22.68■■□□□ 1.22
TMED3-203ENST00000536821 SLIT1O75093 1534 aa22.68■■□□□ 1.22
TMED3-203ENST00000536821 ADAMTS13Q76LX8 1427 aa22.68■■□□□ 1.22
TMED3-203ENST00000536821 KNDC1Q76NI1 1749 aa22.67■■□□□ 1.22
TMED3-203ENST00000536821 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
TMED3-203ENST00000536821 ARHGAP23Q9P227 1491 aa22.67■■□□□ 1.22
TMED3-203ENST00000536821 THEMISQ8N1K5 641 aaPredicted RBP22.66■■□□□ 1.22
TMED3-203ENST00000536821 TECPR2O15040 1411 aa22.65■■□□□ 1.22
TMED3-203ENST00000536821 SENP3-EIF4A1A0A087X0R7 540 aa22.64■■□□□ 1.22
TMED3-203ENST00000536821 SIRT1Q96EB6 747 aa22.64■■□□□ 1.22
TMED3-203ENST00000536821 CGNL1Q0VF96 1302 aa22.64■■□□□ 1.21
TMED3-203ENST00000536821 INSRP06213 1382 aa22.64■■□□□ 1.21
TMED3-203ENST00000536821 FAM135BQ49AJ0 1406 aa22.64■■□□□ 1.21
TMED3-203ENST00000536821 CPS1P31327 1500 aa22.63■■□□□ 1.21
TMED3-203ENST00000536821 A0A1W2PP64 1363 aa22.62■■□□□ 1.21
TMED3-203ENST00000536821 MORC1Q86VD1 984 aa22.62■■□□□ 1.21
TMED3-203ENST00000536821 ADAMTSL3P82987 1691 aa22.61■■□□□ 1.21
TMED3-203ENST00000536821 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
TMED3-203ENST00000536821 BLMP54132 1417 aaPredicted RBP22.61■■□□□ 1.21
TMED3-203ENST00000536821 MED14O60244 1454 aa22.6■■□□□ 1.21
TMED3-203ENST00000536821 WDR43Q15061 677 aaKnown RBP eCLIP22.6■■□□□ 1.21
TMED3-203ENST00000536821 SLC26A8Q96RN1 970 aa22.59■■□□□ 1.21
TMED3-203ENST00000536821 CEP170BQ9Y4F5 1589 aaPredicted RBP22.59■■□□□ 1.21
TMED3-203ENST00000536821 NSD2O96028 1365 aa22.58■■□□□ 1.21
TMED3-203ENST00000536821 CD163L1Q9NR16 1453 aa22.58■■□□□ 1.21
TMED3-203ENST00000536821 ADAMTS8Q9UP79 889 aa22.58■■□□□ 1.21
TMED3-203ENST00000536821 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
TMED3-203ENST00000536821 CABP1Q9NZU7 370 aa22.57■■□□□ 1.2
TMED3-203ENST00000536821 ROBO2Q9HCK4 1378 aa22.56■■□□□ 1.2
TMED3-203ENST00000536821 HDGFL2Q7Z4V5 671 aaPredicted RBP22.56■■□□□ 1.2
TMED3-203ENST00000536821 IPO9Q96P70 1041 aaKnown RBP22.56■■□□□ 1.2
TMED3-203ENST00000536821 NUDCQ9Y266 331 aa22.56■■□□□ 1.2
TMED3-203ENST00000536821 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
TMED3-203ENST00000536821 TBX22Q9Y458 520 aa22.55■■□□□ 1.2
TMED3-203ENST00000536821 ANP32AP39687 249 aaKnown RBP22.54■■□□□ 1.2
TMED3-203ENST00000536821 SALL2Q9Y467 1007 aaPredicted RBP22.54■■□□□ 1.2
TMED3-203ENST00000536821 PTPRUQ92729 1446 aa22.53■■□□□ 1.2
TMED3-203ENST00000536821 PAK3O75914 559 aaPredicted RBP22.52■■□□□ 1.2
TMED3-203ENST00000536821 POLR3AO14802 1390 aaPredicted RBP22.52■■□□□ 1.2
TMED3-203ENST00000536821 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
TMED3-203ENST00000536821 ATP7BP35670 1465 aa22.51■■□□□ 1.19
TMED3-203ENST00000536821 AMOTL2Q9Y2J4 779 aa22.5■■□□□ 1.19
TMED3-203ENST00000536821 ZNF142P52746 1687 aaPredicted RBP22.49■■□□□ 1.19
TMED3-203ENST00000536821 PPIP5K1Q6PFW1 1433 aa22.48■■□□□ 1.19
TMED3-203ENST00000536821 NUDT16Q96DE0 195 aaKnown RBP22.48■■□□□ 1.19
TMED3-203ENST00000536821 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
TMED3-203ENST00000536821 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.48■■□□□ 1.19
TMED3-203ENST00000536821 FYB1O15117 783 aa22.47■■□□□ 1.19
TMED3-203ENST00000536821 CCDC136Q96JN2 1154 aa22.47■■□□□ 1.19
TMED3-203ENST00000536821 ADGRB2O60241 1585 aa22.47■■□□□ 1.19
TMED3-203ENST00000536821 PDE3BQ13370 1112 aa22.46■■□□□ 1.19
TMED3-203ENST00000536821 ANKRD26Q9UPS8 1709 aa22.46■■□□□ 1.19
TMED3-203ENST00000536821 MTHFSP49914 203 aa22.46■■□□□ 1.19
TMED3-203ENST00000536821 SETD1BQ9UPS6 1966 aaKnown RBP22.45■■□□□ 1.18
TMED3-203ENST00000536821 CCDC61Q9Y6R9 512 aa22.45■■□□□ 1.18
TMED3-203ENST00000536821 ANKLE2Q86XL3 938 aa22.44■■□□□ 1.18
TMED3-203ENST00000536821 ZBTB47Q9UFB7 747 aaPredicted RBP22.44■■□□□ 1.18
TMED3-203ENST00000536821 PTCH1Q13635 1447 aa22.44■■□□□ 1.18
TMED3-203ENST00000536821 KIF20BQ96Q89 1820 aa22.44■■□□□ 1.18
TMED3-203ENST00000536821 CPSF1Q10570 1443 aaKnown RBP22.43■■□□□ 1.18
TMED3-203ENST00000536821 CFAP53Q96M91 514 aa22.43■■□□□ 1.18
TMED3-203ENST00000536821 NCKAP5LQ9HCH0 1330 aa22.42■■□□□ 1.18
TMED3-203ENST00000536821 PRR36Q9H6K5 1346 aa22.42■■□□□ 1.18
TMED3-203ENST00000536821 SHPRHQ149N8 1683 aa22.42■■□□□ 1.18
TMED3-203ENST00000536821 RTL5Q5HYW3 569 aaPredicted RBP22.42■■□□□ 1.18
TMED3-203ENST00000536821 CCDC146Q8IYE0 955 aa22.42■■□□□ 1.18
TMED3-203ENST00000536821 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms