RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 TSPOAP1O95153 1857 aa23.35■■□□□ 1.33
RAB40C-203ENST00000535977 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
RAB40C-203ENST00000535977 ADGRB1O14514 1584 aa23.34■■□□□ 1.33
RAB40C-203ENST00000535977 VGFO15240 615 aaPredicted RBP23.34■■□□□ 1.33
RAB40C-203ENST00000535977 NFKBIBQ15653 356 aa23.33■■□□□ 1.33
RAB40C-203ENST00000535977 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
RAB40C-203ENST00000535977 SLFN5Q08AF3 891 aa23.32■■□□□ 1.32
RAB40C-203ENST00000535977 KIF13AQ9H1H9 1805 aa23.32■■□□□ 1.32
RAB40C-203ENST00000535977 TRMT2AQ8IZ69 625 aaKnown RBP23.32■■□□□ 1.32
RAB40C-203ENST00000535977 ZC3H13Q5T200 1668 aaKnown RBP23.31■■□□□ 1.32
RAB40C-203ENST00000535977 PIK3C2BO00750 1634 aa23.31■■□□□ 1.32
RAB40C-203ENST00000535977 TRAK1Q9UPV9 953 aa23.31■■□□□ 1.32
RAB40C-203ENST00000535977 FAM43AQ8N2R8 423 aa23.3■■□□□ 1.32
RAB40C-203ENST00000535977 QRICH2Q9H0J4 1663 aa23.3■■□□□ 1.32
RAB40C-203ENST00000535977 CRBNQ96SW2 442 aa23.29■■□□□ 1.32
RAB40C-203ENST00000535977 CFAP65Q6ZU64 1925 aaKnown RBP23.29■■□□□ 1.32
RAB40C-203ENST00000535977 PLIN1O60240 522 aa23.29■■□□□ 1.32
RAB40C-203ENST00000535977 DIP2CQ9Y2E4 1556 aa23.29■■□□□ 1.32
RAB40C-203ENST00000535977 E9PSI1 815 aa23.27■■□□□ 1.32
RAB40C-203ENST00000535977 SLC52A1Q9NWF4 448 aa23.27■■□□□ 1.32
RAB40C-203ENST00000535977 ZFYVE9O95405 1425 aa23.27■■□□□ 1.32
RAB40C-203ENST00000535977 USP32Q8NFA0 1604 aa23.26■■□□□ 1.31
RAB40C-203ENST00000535977 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
RAB40C-203ENST00000535977 APAF1O14727 1248 aa23.25■■□□□ 1.31
RAB40C-203ENST00000535977 MORC1Q86VD1 984 aa23.25■■□□□ 1.31
RAB40C-203ENST00000535977 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
RAB40C-203ENST00000535977 EVC2Q86UK5 1308 aa23.25■■□□□ 1.31
RAB40C-203ENST00000535977 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
RAB40C-203ENST00000535977 RICTORQ6R327 1708 aa23.23■■□□□ 1.31
RAB40C-203ENST00000535977 NEXMIFQ5QGS0 1516 aa23.23■■□□□ 1.31
RAB40C-203ENST00000535977 DDRGK1Q96HY6 314 aa23.23■■□□□ 1.31
RAB40C-203ENST00000535977 SIGLEC1Q9BZZ2 1709 aa23.23■■□□□ 1.31
RAB40C-203ENST00000535977 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
RAB40C-203ENST00000535977 GLI2P10070 1586 aa23.22■■□□□ 1.31
RAB40C-203ENST00000535977 CGNL1Q0VF96 1302 aa23.21■■□□□ 1.31
RAB40C-203ENST00000535977 TMEM132EQ6IEE7 984 aa23.21■■□□□ 1.31
RAB40C-203ENST00000535977 NSD2O96028 1365 aa23.21■■□□□ 1.31
RAB40C-203ENST00000535977 SLC12A5Q9H2X9 1139 aa23.2■■□□□ 1.3
RAB40C-203ENST00000535977 GLIPR1L2Q4G1C9 344 aa23.19■■□□□ 1.3
RAB40C-203ENST00000535977 CENPQQ7L2Z9 268 aaPredicted RBP23.19■■□□□ 1.3
RAB40C-203ENST00000535977 NINLQ9Y2I6 1382 aa23.19■■□□□ 1.3
RAB40C-203ENST00000535977 SLC4A3P48751 1232 aa23.18■■□□□ 1.3
RAB40C-203ENST00000535977 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
RAB40C-203ENST00000535977 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
RAB40C-203ENST00000535977 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
RAB40C-203ENST00000535977 IDI1Q13907 227 aa23.17■■□□□ 1.3
RAB40C-203ENST00000535977 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
RAB40C-203ENST00000535977 C20orf194Q5TEA3 1177 aa23.16■■□□□ 1.3
RAB40C-203ENST00000535977 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
RAB40C-203ENST00000535977 ZMYND15Q9H091 742 aa23.15■■□□□ 1.3
RAB40C-203ENST00000535977 KDM2BQ8NHM5 1336 aa23.15■■□□□ 1.3
RAB40C-203ENST00000535977 VSIG10Q8N0Z9 540 aa23.13■■□□□ 1.29
RAB40C-203ENST00000535977 WWC1Q8IX03 1113 aa23.12■■□□□ 1.29
RAB40C-203ENST00000535977 TULP4Q9NRJ4 1543 aa23.12■■□□□ 1.29
RAB40C-203ENST00000535977 SHPRHQ149N8 1683 aa23.11■■□□□ 1.29
RAB40C-203ENST00000535977 PPP6R1Q9UPN7 881 aa23.11■■□□□ 1.29
RAB40C-203ENST00000535977 YEATS2Q9ULM3 1422 aa23.1■■□□□ 1.29
RAB40C-203ENST00000535977 SPINK5Q9NQ38 1064 aaPredicted RBP23.1■■□□□ 1.29
RAB40C-203ENST00000535977 PDE3AQ14432 1141 aa23.1■■□□□ 1.29
RAB40C-203ENST00000535977 WDR63Q8IWG1 891 aa23.09■■□□□ 1.29
RAB40C-203ENST00000535977 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
RAB40C-203ENST00000535977 CCDC27Q2M243 656 aa23.09■■□□□ 1.29
RAB40C-203ENST00000535977 FRAT2O75474 233 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-203ENST00000535977 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
RAB40C-203ENST00000535977 MTHFSP49914 203 aa23.08■■□□□ 1.28
RAB40C-203ENST00000535977 SKAP1Q86WV1 359 aa23.07■■□□□ 1.28
RAB40C-203ENST00000535977 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
RAB40C-203ENST00000535977 DAXXQ9UER7 740 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-203ENST00000535977 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
RAB40C-203ENST00000535977 RRAGDQ9NQL2 400 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-203ENST00000535977 IQSEC2Q5JU85 1478 aa23.05■■□□□ 1.28
RAB40C-203ENST00000535977 AAMPQ13685 434 aa23.05■■□□□ 1.28
RAB40C-203ENST00000535977 NUTM2DQ5VT03 806 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-203ENST00000535977 TNNT2P45379 298 aaPredicted RBP23.03■■□□□ 1.28
RAB40C-203ENST00000535977 TCP11L2Q8N4U5 519 aa23.03■■□□□ 1.28
RAB40C-203ENST00000535977 ABCC11Q96J66 1382 aa23.03■■□□□ 1.28
RAB40C-203ENST00000535977 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
RAB40C-203ENST00000535977 REREQ9P2R6 1566 aa23.02■■□□□ 1.28
RAB40C-203ENST00000535977 BCAR3O75815 825 aa23.02■■□□□ 1.28
RAB40C-203ENST00000535977 TERF2IPQ9NYB0 399 aa23.02■■□□□ 1.27
RAB40C-203ENST00000535977 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
RAB40C-203ENST00000535977 PTPRMP28827 1452 aa23■■□□□ 1.27
RAB40C-203ENST00000535977 AGLP35573 1532 aa23■■□□□ 1.27
RAB40C-203ENST00000535977 MED14O60244 1454 aa23■■□□□ 1.27
RAB40C-203ENST00000535977 MYO5BQ9ULV0 1848 aa22.99■■□□□ 1.27
RAB40C-203ENST00000535977 SRPK2P78362 688 aaKnown RBP22.99■■□□□ 1.27
RAB40C-203ENST00000535977 YTHDC2Q9H6S0 1430 aaKnown RBP22.99■■□□□ 1.27
RAB40C-203ENST00000535977 CLTCQ00610 1675 aaKnown RBP22.98■■□□□ 1.27
RAB40C-203ENST00000535977 MYH16Q9H6N6 1097 aa22.97■■□□□ 1.27
RAB40C-203ENST00000535977 POGKQ9P215 609 aa22.97■■□□□ 1.27
RAB40C-203ENST00000535977 STK26Q9P289 416 aa22.97■■□□□ 1.27
RAB40C-203ENST00000535977 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
RAB40C-203ENST00000535977 CANXP27824 592 aaKnown RBP22.95■■□□□ 1.27
RAB40C-203ENST00000535977 FAM161AQ3B820 660 aa22.95■■□□□ 1.27
RAB40C-203ENST00000535977 CT47B1P0C2W7 299 aaPredicted RBP22.95■■□□□ 1.26
RAB40C-203ENST00000535977 ALKQ9UM73 1620 aa22.94■■□□□ 1.26
RAB40C-203ENST00000535977 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
RAB40C-203ENST00000535977 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
RAB40C-203ENST00000535977 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
RAB40C-203ENST00000535977 RARSP54136 660 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms