RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
COL21A1-212ENST00000535941 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
COL21A1-212ENST00000535941 PTCH1Q13635 1447 aa11.05□□□□□ -0.64
COL21A1-212ENST00000535941 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
COL21A1-212ENST00000535941 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
COL21A1-212ENST00000535941 ANP32EQ9BTT0 268 aa11.04□□□□□ -0.64
COL21A1-212ENST00000535941 ATP7BP35670 1465 aa11.04□□□□□ -0.64
COL21A1-212ENST00000535941 CENPJQ9HC77 1338 aaPredicted RBP11.04□□□□□ -0.64
COL21A1-212ENST00000535941 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
COL21A1-212ENST00000535941 RALBP1Q15311 655 aa11.03□□□□□ -0.64
COL21A1-212ENST00000535941 RGPD8O14715 1765 aaPredicted RBP11.03□□□□□ -0.64
COL21A1-212ENST00000535941 PTPRUQ92729 1446 aa11.02□□□□□ -0.64
COL21A1-212ENST00000535941 MYBBP1AQ9BQG0 1328 aaKnown RBP11.02□□□□□ -0.64
COL21A1-212ENST00000535941 METP08581 1390 aa11.01□□□□□ -0.65
COL21A1-212ENST00000535941 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
COL21A1-212ENST00000535941 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
COL21A1-212ENST00000535941 ANKRD36BQ8N2N9 1353 aa11□□□□□ -0.65
COL21A1-212ENST00000535941 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.99□□□□□ -0.65
COL21A1-212ENST00000535941 STRCP1A6NGW2 1772 aa10.99□□□□□ -0.65
COL21A1-212ENST00000535941 CPSF1Q10570 1443 aaKnown RBP10.99□□□□□ -0.65
COL21A1-212ENST00000535941 NSD2O96028 1365 aa10.98□□□□□ -0.65
COL21A1-212ENST00000535941 SMG6Q86US8 1419 aaKnown RBP10.98□□□□□ -0.65
COL21A1-212ENST00000535941 PNISRQ8TF01 805 aaKnown RBP10.98□□□□□ -0.65
COL21A1-212ENST00000535941 XIRP1Q702N8 1843 aaKnown RBP10.98□□□□□ -0.65
COL21A1-212ENST00000535941 RGPD1P0DJD0 1748 aa10.98□□□□□ -0.65
COL21A1-212ENST00000535941 PIK3R4Q99570 1358 aa10.98□□□□□ -0.65
COL21A1-212ENST00000535941 PANK3Q9H999 370 aa10.97□□□□□ -0.65
COL21A1-212ENST00000535941 CARD14Q9BXL6 1004 aa10.97□□□□□ -0.65
COL21A1-212ENST00000535941 IQSEC2Q5JU85 1478 aa10.97□□□□□ -0.65
COL21A1-212ENST00000535941 PHRF1Q9P1Y6 1649 aaKnown RBP10.96□□□□□ -0.65
COL21A1-212ENST00000535941 PLEKHH1Q9ULM0 1364 aa10.96□□□□□ -0.66
COL21A1-212ENST00000535941 MAP2P11137 1827 aaKnown RBP10.96□□□□□ -0.66
COL21A1-212ENST00000535941 TMEM132EQ6IEE7 984 aa10.95□□□□□ -0.66
COL21A1-212ENST00000535941 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
COL21A1-212ENST00000535941 ZBED9Q6R2W3 1325 aa10.95□□□□□ -0.66
COL21A1-212ENST00000535941 STRCQ7RTU9 1775 aa10.95□□□□□ -0.66
COL21A1-212ENST00000535941 NKTRP30414 1462 aaKnown RBP10.94□□□□□ -0.66
COL21A1-212ENST00000535941 PIK3C2AO00443 1686 aa10.94□□□□□ -0.66
COL21A1-212ENST00000535941 SSH2Q76I76 1423 aa10.93□□□□□ -0.66
COL21A1-212ENST00000535941 ROBO2Q9HCK4 1378 aa10.93□□□□□ -0.66
COL21A1-212ENST00000535941 NSD3Q9BZ95 1437 aa10.93□□□□□ -0.66
COL21A1-212ENST00000535941 A0A1W2PP64 1363 aa10.93□□□□□ -0.66
COL21A1-212ENST00000535941 POLR3AO14802 1390 aaPredicted RBP10.93□□□□□ -0.66
COL21A1-212ENST00000535941 LTKP29376 864 aa10.93□□□□□ -0.66
COL21A1-212ENST00000535941 NLRP13Q86W25 1043 aa10.93□□□□□ -0.66
COL21A1-212ENST00000535941 TRPM3Q9HCF6 1732 aaPredicted RBP10.93□□□□□ -0.66
COL21A1-212ENST00000535941 EVC2Q86UK5 1308 aa10.93□□□□□ -0.66
COL21A1-212ENST00000535941 TRAK1Q9UPV9 953 aa10.92□□□□□ -0.66
COL21A1-212ENST00000535941 CRYBG1Q9Y4K1 1723 aa10.92□□□□□ -0.66
COL21A1-212ENST00000535941 PEAK1Q9H792 1746 aa10.91□□□□□ -0.66
COL21A1-212ENST00000535941 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
COL21A1-212ENST00000535941 MLECQ14165 292 aa10.91□□□□□ -0.66
COL21A1-212ENST00000535941 NUTM2DQ5VT03 806 aaPredicted RBP10.89□□□□□ -0.67
COL21A1-212ENST00000535941 PPP2R1AP30153 589 aa10.89□□□□□ -0.67
COL21A1-212ENST00000535941 TBX22Q9Y458 520 aa10.89□□□□□ -0.67
COL21A1-212ENST00000535941 ANKARQ7Z5J8 1434 aa10.89□□□□□ -0.67
COL21A1-212ENST00000535941 PNPLA6Q8IY17 1366 aa10.88□□□□□ -0.67
COL21A1-212ENST00000535941 KIF1AQ12756 1690 aa10.88□□□□□ -0.67
COL21A1-212ENST00000535941 EDC4Q6P2E9 1401 aaKnown RBP10.88□□□□□ -0.67
COL21A1-212ENST00000535941 PRAM1Q96QH2 718 aa10.88□□□□□ -0.67
COL21A1-212ENST00000535941 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
COL21A1-212ENST00000535941 RNF123Q5XPI4 1314 aa10.88□□□□□ -0.67
COL21A1-212ENST00000535941 HDGFP51858 240 aaKnown RBP10.88□□□□□ -0.67
COL21A1-212ENST00000535941 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
COL21A1-212ENST00000535941 CEBPAP49715 358 aaPredicted RBP10.87□□□□□ -0.67
COL21A1-212ENST00000535941 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
COL21A1-212ENST00000535941 MST1RQ04912 1400 aa10.86□□□□□ -0.67
COL21A1-212ENST00000535941 ZNF521Q96K83 1311 aa10.86□□□□□ -0.67
COL21A1-212ENST00000535941 ALS2Q96Q42 1657 aa10.86□□□□□ -0.67
COL21A1-212ENST00000535941 TRHP20396 242 aaPredicted RBP10.86□□□□□ -0.67
COL21A1-212ENST00000535941 OVOS2A0A0J9YW53 1432 aa10.85□□□□□ -0.67
COL21A1-212ENST00000535941 OVOS2Q6IE36 1432 aa10.85□□□□□ -0.67
COL21A1-212ENST00000535941 PPIP5K1Q6PFW1 1433 aa10.85□□□□□ -0.67
COL21A1-212ENST00000535941 ESF1Q9H501 851 aaKnown RBP10.84□□□□□ -0.67
COL21A1-212ENST00000535941 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
COL21A1-212ENST00000535941 SLC12A5Q9H2X9 1139 aa10.84□□□□□ -0.67
COL21A1-212ENST00000535941 CDK12Q9NYV4 1490 aaPredicted RBP10.84□□□□□ -0.67
COL21A1-212ENST00000535941 LTN1O94822 1766 aa10.84□□□□□ -0.67
COL21A1-212ENST00000535941 ANO8Q9HCE9 1232 aaPredicted RBP10.83□□□□□ -0.67
COL21A1-212ENST00000535941 KNSTRNQ9Y448 316 aa10.83□□□□□ -0.67
COL21A1-212ENST00000535941 PRR36Q9H6K5 1346 aa10.83□□□□□ -0.68
COL21A1-212ENST00000535941 AATKQ6ZMQ8 1374 aa10.83□□□□□ -0.68
COL21A1-212ENST00000535941 THEMISQ8N1K5 641 aaPredicted RBP10.83□□□□□ -0.68
COL21A1-212ENST00000535941 WASLO00401 505 aaPredicted RBP10.83□□□□□ -0.68
COL21A1-212ENST00000535941 NPHP4O75161 1426 aaPredicted RBP10.83□□□□□ -0.68
COL21A1-212ENST00000535941 CGNL1Q0VF96 1302 aa10.83□□□□□ -0.68
COL21A1-212ENST00000535941 CDK19Q9BWU1 502 aa10.82□□□□□ -0.68
COL21A1-212ENST00000535941 LMTK3Q96Q04 1460 aa10.82□□□□□ -0.68
COL21A1-212ENST00000535941 CABP2Q9NPB3 220 aa10.81□□□□□ -0.68
COL21A1-212ENST00000535941 LRRC37A3O60309 1634 aa10.81□□□□□ -0.68
COL21A1-212ENST00000535941 USP6P35125 1406 aa10.81□□□□□ -0.68
COL21A1-212ENST00000535941 USP31Q70CQ4 1352 aa10.81□□□□□ -0.68
COL21A1-212ENST00000535941 ADGRL3Q9HAR2 1447 aa10.81□□□□□ -0.68
COL21A1-212ENST00000535941 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
COL21A1-212ENST00000535941 CC2D1BQ5T0F9 858 aaKnown RBP10.8□□□□□ -0.68
COL21A1-212ENST00000535941 WAPLQ7Z5K2 1190 aa10.8□□□□□ -0.68
COL21A1-212ENST00000535941 VIRMAQ69YN4 1812 aaKnown RBP10.8□□□□□ -0.68
COL21A1-212ENST00000535941 NCOA3Q9Y6Q9 1424 aa10.8□□□□□ -0.68
COL21A1-212ENST00000535941 PHF23Q9BUL5 403 aaPredicted RBP10.8□□□□□ -0.68
COL21A1-212ENST00000535941 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms