RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 TMEM132EQ6IEE7 984 aa30.63■■■□□ 2.49
LTBR-205ENST00000535739 WAPLQ7Z5K2 1190 aa30.63■■■□□ 2.49
LTBR-205ENST00000535739 ADAMTS2O95450 1211 aa30.62■■■□□ 2.49
LTBR-205ENST00000535739 LRPPRCP42704 1394 aaKnown RBP30.62■■■□□ 2.49
LTBR-205ENST00000535739 TECPR2O15040 1411 aa30.62■■■□□ 2.49
LTBR-205ENST00000535739 PIK3C2GO75747 1445 aa30.61■■■□□ 2.49
LTBR-205ENST00000535739 ESCO1Q5FWF5 840 aa30.6■■■□□ 2.49
LTBR-205ENST00000535739 KNDC1Q76NI1 1749 aa30.6■■■□□ 2.49
LTBR-205ENST00000535739 CDK12Q9NYV4 1490 aaPredicted RBP30.59■■■□□ 2.49
LTBR-205ENST00000535739 UPF1Q92900 1129 aaKnown RBP eCLIP30.59■■■□□ 2.49
LTBR-205ENST00000535739 ABCC11Q96J66 1382 aa30.58■■■□□ 2.49
LTBR-205ENST00000535739 QTRT2Q9H974 415 aaKnown RBP30.58■■■□□ 2.49
LTBR-205ENST00000535739 PLEKHH1Q9ULM0 1364 aa30.57■■■□□ 2.48
LTBR-205ENST00000535739 NGLY1Q96IV0 654 aa30.57■■■□□ 2.48
LTBR-205ENST00000535739 NUTM2FA1L443 756 aa30.56■■■□□ 2.48
LTBR-205ENST00000535739 ACIN1Q9UKV3 1341 aaKnown RBP30.55■■■□□ 2.48
LTBR-205ENST00000535739 NPHP3Q7Z494 1330 aa30.54■■■□□ 2.48
LTBR-205ENST00000535739 YTHDC2Q9H6S0 1430 aaKnown RBP30.54■■■□□ 2.48
LTBR-205ENST00000535739 COL22A1Q8NFW1 1626 aaPredicted RBP30.54■■■□□ 2.48
LTBR-205ENST00000535739 PXDNQ92626 1479 aa30.52■■■□□ 2.48
LTBR-205ENST00000535739 FOXO3O43524 673 aa30.52■■■□□ 2.48
LTBR-205ENST00000535739 RBM6P78332 1123 aaKnown RBP30.52■■■□□ 2.48
LTBR-205ENST00000535739 XPCQ01831 940 aaPredicted RBP30.52■■■□□ 2.48
LTBR-205ENST00000535739 FMN2Q9NZ56 1722 aa30.5■■■□□ 2.47
LTBR-205ENST00000535739 RGS12O14924 1447 aa30.5■■■□□ 2.47
LTBR-205ENST00000535739 RAB3GAP2Q9H2M9 1393 aa30.5■■■□□ 2.47
LTBR-205ENST00000535739 C14orf93Q9H972 538 aaKnown RBP30.49■■■□□ 2.47
LTBR-205ENST00000535739 NRXN1Q9ULB1 1477 aa30.47■■■□□ 2.47
LTBR-205ENST00000535739 CFAP70Q5T0N1 1121 aa30.47■■■□□ 2.47
LTBR-205ENST00000535739 USP21Q9UK80 565 aa30.46■■■□□ 2.47
LTBR-205ENST00000535739 MYOM2P54296 1465 aa30.45■■■□□ 2.47
LTBR-205ENST00000535739 RGPD8O14715 1765 aaPredicted RBP30.44■■■□□ 2.46
LTBR-205ENST00000535739 SIRT1Q96EB6 747 aa30.44■■■□□ 2.46
LTBR-205ENST00000535739 FNBP4Q8N3X1 1017 aaPredicted RBP30.43■■■□□ 2.46
LTBR-205ENST00000535739 MARF1Q9Y4F3 1742 aaKnown RBP30.43■■■□□ 2.46
LTBR-205ENST00000535739 DHX57Q6P158 1386 aaKnown RBP30.42■■■□□ 2.46
LTBR-205ENST00000535739 KIF1AQ12756 1690 aa30.4■■■□□ 2.46
LTBR-205ENST00000535739 TRPC5Q9UL62 973 aaPredicted RBP30.4■■■□□ 2.46
LTBR-205ENST00000535739 SAFB2Q14151 953 aaKnown RBP eCLIP30.37■■■□□ 2.45
LTBR-205ENST00000535739 PRAM1Q96QH2 718 aa30.36■■■□□ 2.45
LTBR-205ENST00000535739 ATRNO75882 1429 aa30.36■■■□□ 2.45
LTBR-205ENST00000535739 SPATA31A3Q5VYP0 1347 aa30.34■■■□□ 2.45
LTBR-205ENST00000535739 KRT28Q7Z3Y7 464 aa30.34■■■□□ 2.45
LTBR-205ENST00000535739 BCL9LQ86UU0 1499 aa30.33■■■□□ 2.45
LTBR-205ENST00000535739 PHF8Q9UPP1 1060 aa30.32■■■□□ 2.44
LTBR-205ENST00000535739 POGKQ9P215 609 aa30.3■■■□□ 2.44
LTBR-205ENST00000535739 DLC1Q96QB1 1528 aa30.3■■■□□ 2.44
LTBR-205ENST00000535739 ADGRB1O14514 1584 aa30.28■■■□□ 2.44
LTBR-205ENST00000535739 KDM2AQ9Y2K7 1162 aa30.28■■■□□ 2.44
LTBR-205ENST00000535739 DCAF11Q8TEB1 546 aa30.26■■■□□ 2.43
LTBR-205ENST00000535739 EP400Q96L91 3159 aa30.26■■■□□ 2.43
LTBR-205ENST00000535739 PSME1Q06323 249 aa30.25■■■□□ 2.43
LTBR-205ENST00000535739 TRAK1Q9UPV9 953 aa30.25■■■□□ 2.43
LTBR-205ENST00000535739 ATAD2Q6PL18 1390 aa30.25■■■□□ 2.43
LTBR-205ENST00000535739 USP32Q8NFA0 1604 aa30.25■■■□□ 2.43
LTBR-205ENST00000535739 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.25■■■□□ 2.43
LTBR-205ENST00000535739 TNS3Q68CZ2 1445 aa30.24■■■□□ 2.43
LTBR-205ENST00000535739 GJD4Q96KN9 370 aaPredicted RBP30.22■■■□□ 2.43
LTBR-205ENST00000535739 ADGRB2O60241 1585 aa30.22■■■□□ 2.43
LTBR-205ENST00000535739 PLEKHG5O94827 1062 aa30.21■■■□□ 2.43
LTBR-205ENST00000535739 PMFBP1Q8TBY8 1022 aa30.21■■■□□ 2.43
LTBR-205ENST00000535739 CABLES1Q8TDN4 633 aa30.21■■■□□ 2.43
LTBR-205ENST00000535739 HIRIP3Q9BW71 556 aaPredicted RBP30.21■■■□□ 2.43
LTBR-205ENST00000535739 SLIT2O94813 1529 aa30.21■■■□□ 2.43
LTBR-205ENST00000535739 UNC5CLQ8IV45 518 aa30.2■■■□□ 2.43
LTBR-205ENST00000535739 ANKARQ7Z5J8 1434 aa30.2■■■□□ 2.42
LTBR-205ENST00000535739 SBNO1A3KN83 1393 aa30.19■■■□□ 2.42
LTBR-205ENST00000535739 HRCP23327 699 aa30.19■■■□□ 2.42
LTBR-205ENST00000535739 HAP1P54257 671 aaPredicted RBP30.19■■■□□ 2.42
LTBR-205ENST00000535739 LMOD2Q6P5Q4 547 aa30.19■■■□□ 2.42
LTBR-205ENST00000535739 MINK1Q8N4C8 1332 aaPredicted RBP30.19■■■□□ 2.42
LTBR-205ENST00000535739 ABCA3Q99758 1704 aa30.17■■■□□ 2.42
LTBR-205ENST00000535739 GLI3P10071 1580 aa30.15■■■□□ 2.42
LTBR-205ENST00000535739 RALGAPBQ86X10 1494 aa30.15■■■□□ 2.42
LTBR-205ENST00000535739 STAC3Q96MF2 364 aa30.14■■■□□ 2.42
LTBR-205ENST00000535739 ARHGEF10O15013 1369 aa30.14■■■□□ 2.41
LTBR-205ENST00000535739 PLCH1Q4KWH8 1693 aa30.12■■■□□ 2.41
LTBR-205ENST00000535739 TRPM3Q9HCF6 1732 aaPredicted RBP30.12■■■□□ 2.41
LTBR-205ENST00000535739 PRR36Q9H6K5 1346 aa30.12■■■□□ 2.41
LTBR-205ENST00000535739 WASLO00401 505 aaPredicted RBP30.1■■■□□ 2.41
LTBR-205ENST00000535739 TULP4Q9NRJ4 1543 aa30.1■■■□□ 2.41
LTBR-205ENST00000535739 ARHGEF28Q8N1W1 1705 aaKnown RBP30.1■■■□□ 2.41
LTBR-205ENST00000535739 EIF3AQ14152 1382 aaKnown RBP30.09■■■□□ 2.41
LTBR-205ENST00000535739 BRWD3Q6RI45 1802 aa30.09■■■□□ 2.41
LTBR-205ENST00000535739 NWD2Q9ULI1 1742 aa30.09■■■□□ 2.41
LTBR-205ENST00000535739 ALS2Q96Q42 1657 aa30.07■■■□□ 2.4
LTBR-205ENST00000535739 GPRASP1Q5JY77 1395 aa30.05■■■□□ 2.4
LTBR-205ENST00000535739 VPS72Q15906 364 aa30.05■■■□□ 2.4
LTBR-205ENST00000535739 SRCAPQ6ZRS2 3230 aa30.05■■■□□ 2.4
LTBR-205ENST00000535739 FAM83GA6ND36 823 aa30.04■■■□□ 2.4
LTBR-205ENST00000535739 CCDC9Q9Y3X0 531 aaKnown RBP30.02■■■□□ 2.4
LTBR-205ENST00000535739 CCDC125Q86Z20 511 aa30.01■■■□□ 2.39
LTBR-205ENST00000535739 NGDNQ8NEJ9 315 aaKnown RBP30.01■■■□□ 2.39
LTBR-205ENST00000535739 SEPT12Q8IYM1 358 aa30■■■□□ 2.39
LTBR-205ENST00000535739 ITSN1Q15811 1721 aa29.99■■■□□ 2.39
LTBR-205ENST00000535739 NRAPQ86VF7 1730 aa29.98■■■□□ 2.39
LTBR-205ENST00000535739 PAK3O75914 559 aaPredicted RBP29.97■■■□□ 2.39
LTBR-205ENST00000535739 NUDT16Q96DE0 195 aaKnown RBP29.97■■■□□ 2.39
LTBR-205ENST00000535739 ATP7BP35670 1465 aa29.97■■■□□ 2.39
LTBR-205ENST00000535739 KIAA1210Q9ULL0 1709 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms