RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 ACBD3Q9H3P7 528 aa11.5□□□□□ -0.57
TNC-210ENST00000535648 TSPYL4Q9UJ04 414 aa11.5□□□□□ -0.57
TNC-210ENST00000535648 FBXW7Q969H0 707 aa11.5□□□□□ -0.57
TNC-210ENST00000535648 BRMS1Q9HCU9 246 aa11.5□□□□□ -0.57
TNC-210ENST00000535648 PATL2C9JE40 543 aaKnown RBP11.49□□□□□ -0.57
TNC-210ENST00000535648 PTPRGP23470 1445 aa11.49□□□□□ -0.57
TNC-210ENST00000535648 ARGLU1Q9NWB6 273 aaPredicted RBP11.49□□□□□ -0.57
TNC-210ENST00000535648 MYOM3Q5VTT5 1437 aa11.49□□□□□ -0.57
TNC-210ENST00000535648 OLFM4Q6UX06 510 aa11.49□□□□□ -0.57
TNC-210ENST00000535648 RALYLQ86SE5 291 aaKnown RBP11.49□□□□□ -0.57
TNC-210ENST00000535648 SYTL4Q96C24 671 aaPredicted RBP11.49□□□□□ -0.57
TNC-210ENST00000535648 MRE11P49959 708 aa11.49□□□□□ -0.57
TNC-210ENST00000535648 NAP1L1P55209 391 aaKnown RBP11.48□□□□□ -0.57
TNC-210ENST00000535648 IL27Q8NEV9 243 aa11.48□□□□□ -0.57
TNC-210ENST00000535648 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.48□□□□□ -0.57
TNC-210ENST00000535648 XBP1P17861 261 aa11.48□□□□□ -0.57
TNC-210ENST00000535648 PSMA5P28066 241 aa11.48□□□□□ -0.57
TNC-210ENST00000535648 EPS15P42566 896 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 RBM33Q96EV2 1170 aaKnown RBP11.47□□□□□ -0.57
TNC-210ENST00000535648 C22orf23Q9BZE7 217 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 FANCD2Q9BXW9 1451 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 ODF2Q5BJF6 829 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 CT47A1Q5JQC4 288 aaPredicted RBP11.47□□□□□ -0.57
TNC-210ENST00000535648 RRP12Q5JTH9 1297 aaKnown RBP11.47□□□□□ -0.57
TNC-210ENST00000535648 PODXL2Q9NZ53 605 aa11.47□□□□□ -0.57
TNC-210ENST00000535648 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
TNC-210ENST00000535648 MNS1Q8NEH6 495 aa11.46□□□□□ -0.57
TNC-210ENST00000535648 IFT57Q9NWB7 429 aa11.46□□□□□ -0.57
TNC-210ENST00000535648 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
TNC-210ENST00000535648 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.57
TNC-210ENST00000535648 LETM1O95202 739 aaPredicted RBP11.46□□□□□ -0.58
TNC-210ENST00000535648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.58
TNC-210ENST00000535648 CDC45O75419 566 aa11.46□□□□□ -0.58
TNC-210ENST00000535648 FOSBP53539 338 aa11.45□□□□□ -0.58
TNC-210ENST00000535648 NOM1Q5C9Z4 860 aaKnown RBP11.45□□□□□ -0.58
TNC-210ENST00000535648 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
TNC-210ENST00000535648 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
TNC-210ENST00000535648 CCDC39Q9UFE4 941 aa11.45□□□□□ -0.58
TNC-210ENST00000535648 UBTFL1P0CB47 393 aaPredicted RBP11.45□□□□□ -0.58
TNC-210ENST00000535648 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
TNC-210ENST00000535648 WASHC4Q2M389 1173 aa11.44□□□□□ -0.58
TNC-210ENST00000535648 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
TNC-210ENST00000535648 CCDC173Q0VFZ6 552 aa11.44□□□□□ -0.58
TNC-210ENST00000535648 FAM13BQ9NYF5 915 aa11.44□□□□□ -0.58
TNC-210ENST00000535648 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
TNC-210ENST00000535648 HSP90B2PQ58FF3 399 aa11.44□□□□□ -0.58
TNC-210ENST00000535648 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
TNC-210ENST00000535648 CCDC7Q96M83 1385 aa11.43□□□□□ -0.58
TNC-210ENST00000535648 MYO6Q9UM54 1294 aa11.43□□□□□ -0.58
TNC-210ENST00000535648 HMOX1P09601 288 aa11.43□□□□□ -0.58
TNC-210ENST00000535648 RRBP1Q9P2E9 1410 aaKnown RBP11.42□□□□□ -0.58
TNC-210ENST00000535648 SART3Q15020 963 aaKnown RBP11.42□□□□□ -0.58
TNC-210ENST00000535648 HIP1O00291 1037 aa11.42□□□□□ -0.58
TNC-210ENST00000535648 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
TNC-210ENST00000535648 BRPF3Q9ULD4 1205 aa11.42□□□□□ -0.58
TNC-210ENST00000535648 ATF3P18847 181 aa11.42□□□□□ -0.58
TNC-210ENST00000535648 R3HCC1Q9Y3T6 440 aaKnown RBP11.42□□□□□ -0.58
TNC-210ENST00000535648 NASPP49321 788 aaPredicted RBP11.41□□□□□ -0.58
TNC-210ENST00000535648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.41□□□□□ -0.58
TNC-210ENST00000535648 KIF7Q2M1P5 1343 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 PDILTQ8N807 584 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 CAGE1Q8TC20 777 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 FYB1O15117 783 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 OFD1O75665 1012 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 AIMP1Q12904 312 aaKnown RBP11.41□□□□□ -0.58
TNC-210ENST00000535648 HSP90AB2PQ58FF8 381 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 ERCC4Q92889 916 aaPredicted RBP11.41□□□□□ -0.58
TNC-210ENST00000535648 BRD4O60885 1362 aaPredicted RBP11.41□□□□□ -0.58
TNC-210ENST00000535648 KIF21BO75037 1637 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 FYCO1Q9BQS8 1478 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 ATAD2BQ9ULI0 1458 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 DCAF8L1A6NGE4 600 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 WASHC2AQ641Q2 1341 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
TNC-210ENST00000535648 SDF4Q9BRK5 362 aa11.4□□□□□ -0.58
TNC-210ENST00000535648 MCM2P49736 904 aa11.4□□□□□ -0.58
TNC-210ENST00000535648 FGD6Q6ZV73 1430 aa11.4□□□□□ -0.58
TNC-210ENST00000535648 CCP110O43303 1012 aa11.4□□□□□ -0.58
TNC-210ENST00000535648 SLC3A2P08195 630 aaKnown RBP11.4□□□□□ -0.59
TNC-210ENST00000535648 DCTN1Q14203 1278 aa11.4□□□□□ -0.59
TNC-210ENST00000535648 SMG6Q86US8 1419 aaKnown RBP11.4□□□□□ -0.59
TNC-210ENST00000535648 PANK1Q8TE04 598 aa11.39□□□□□ -0.59
TNC-210ENST00000535648 FSD1Q9BTV5 496 aa11.39□□□□□ -0.59
TNC-210ENST00000535648 SMARCE1Q969G3 411 aa11.39□□□□□ -0.59
TNC-210ENST00000535648 GNAI3P08754 354 aa11.39□□□□□ -0.59
TNC-210ENST00000535648 ARHGAP5Q13017 1502 aa11.39□□□□□ -0.59
TNC-210ENST00000535648 KIF6Q6ZMV9 814 aa11.39□□□□□ -0.59
TNC-210ENST00000535648 CLASRPQ8N2M8 674 aaKnown RBP11.39□□□□□ -0.59
TNC-210ENST00000535648 PDCP20941 246 aa11.39□□□□□ -0.59
TNC-210ENST00000535648 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 TXLNAP40222 546 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 KINO60870 393 aaKnown RBP11.38□□□□□ -0.59
TNC-210ENST00000535648 MBD3O95983 291 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 FILIP1LQ4L180 1135 aa11.38□□□□□ -0.59
TNC-210ENST00000535648 ZFYVE27Q5T4F4 411 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms