RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
CLIP1-206ENST00000535290 YY1P25490 414 aa12.98□□□□□ -0.33
CLIP1-206ENST00000535290 NALCNQ8IZF0 1738 aa12.98□□□□□ -0.33
CLIP1-206ENST00000535290 GLI3P10071 1580 aa12.98□□□□□ -0.33
CLIP1-206ENST00000535290 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
CLIP1-206ENST00000535290 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
CLIP1-206ENST00000535290 FOXO3O43524 673 aa12.96□□□□□ -0.33
CLIP1-206ENST00000535290 R3HDM1Q15032 1099 aaKnown RBP12.96□□□□□ -0.33
CLIP1-206ENST00000535290 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.33
CLIP1-206ENST00000535290 SLIT2O94813 1529 aa12.96□□□□□ -0.33
CLIP1-206ENST00000535290 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
CLIP1-206ENST00000535290 BAG6P46379 1132 aa12.95□□□□□ -0.34
CLIP1-206ENST00000535290 ESCO1Q5FWF5 840 aa12.95□□□□□ -0.34
CLIP1-206ENST00000535290 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
CLIP1-206ENST00000535290 E9PCH4 1651 aa12.94□□□□□ -0.34
CLIP1-206ENST00000535290 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
CLIP1-206ENST00000535290 PXDNQ92626 1479 aa12.93□□□□□ -0.34
CLIP1-206ENST00000535290 EN1Q05925 392 aaPredicted RBP12.93□□□□□ -0.34
CLIP1-206ENST00000535290 FAM50AQ14320 339 aaKnown RBP12.92□□□□□ -0.34
CLIP1-206ENST00000535290 VPS72Q15906 364 aa12.92□□□□□ -0.34
CLIP1-206ENST00000535290 BRWD3Q6RI45 1802 aa12.92□□□□□ -0.34
CLIP1-206ENST00000535290 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
CLIP1-206ENST00000535290 SPHKAPQ2M3C7 1700 aa12.89□□□□□ -0.35
CLIP1-206ENST00000535290 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
CLIP1-206ENST00000535290 NUP155O75694 1391 aa12.89□□□□□ -0.35
CLIP1-206ENST00000535290 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
CLIP1-206ENST00000535290 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
CLIP1-206ENST00000535290 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
CLIP1-206ENST00000535290 A0A0G2JS52 829 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 LOC105371045A0A1W2PR82 267 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 MYT1Q01538 1121 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 APLP2Q06481 763 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 FAM182BQ5T319 152 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 IQGAP3Q86VI3 1631 aa12.87□□□□□ -0.35
CLIP1-206ENST00000535290 HFM1A2PYH4 1435 aa12.86□□□□□ -0.35
CLIP1-206ENST00000535290 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
CLIP1-206ENST00000535290 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
CLIP1-206ENST00000535290 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
CLIP1-206ENST00000535290 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
CLIP1-206ENST00000535290 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
CLIP1-206ENST00000535290 KCNA4P22459 653 aa12.84□□□□□ -0.35
CLIP1-206ENST00000535290 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
CLIP1-206ENST00000535290 PRAG1Q86YV5 1406 aa12.84□□□□□ -0.35
CLIP1-206ENST00000535290 FAM83GA6ND36 823 aa12.83□□□□□ -0.36
CLIP1-206ENST00000535290 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
CLIP1-206ENST00000535290 IFFO2Q5TF58 517 aa12.82□□□□□ -0.36
CLIP1-206ENST00000535290 KRT28Q7Z3Y7 464 aa12.82□□□□□ -0.36
CLIP1-206ENST00000535290 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
CLIP1-206ENST00000535290 DISP2A7MBM2 1401 aa12.81□□□□□ -0.36
CLIP1-206ENST00000535290 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
CLIP1-206ENST00000535290 NAIPQ13075 1403 aa12.8□□□□□ -0.36
CLIP1-206ENST00000535290 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
CLIP1-206ENST00000535290 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
CLIP1-206ENST00000535290 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
CLIP1-206ENST00000535290 CCDC144AA2RUR9 1427 aa12.78□□□□□ -0.36
CLIP1-206ENST00000535290 TRIM37O94972 964 aa12.77□□□□□ -0.37
CLIP1-206ENST00000535290 LMOD2Q6P5Q4 547 aa12.77□□□□□ -0.37
CLIP1-206ENST00000535290 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
CLIP1-206ENST00000535290 BTG4Q9NY30 223 aa12.77□□□□□ -0.37
CLIP1-206ENST00000535290 STK26Q9P289 416 aa12.77□□□□□ -0.37
CLIP1-206ENST00000535290 TNS3Q68CZ2 1445 aa12.77□□□□□ -0.37
CLIP1-206ENST00000535290 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
CLIP1-206ENST00000535290 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
CLIP1-206ENST00000535290 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
CLIP1-206ENST00000535290 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
CLIP1-206ENST00000535290 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
CLIP1-206ENST00000535290 APBA3O96018 575 aa12.75□□□□□ -0.37
CLIP1-206ENST00000535290 NWD2Q9ULI1 1742 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 PLCH1Q4KWH8 1693 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 PSME1Q06323 249 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 SPON1Q9HCB6 807 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 RGPD1P0DJD0 1748 aa12.74□□□□□ -0.37
CLIP1-206ENST00000535290 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
CLIP1-206ENST00000535290 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
CLIP1-206ENST00000535290 KCNQ2O43526 872 aa12.73□□□□□ -0.37
CLIP1-206ENST00000535290 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
CLIP1-206ENST00000535290 ITGAEP38570 1179 aa12.72□□□□□ -0.37
CLIP1-206ENST00000535290 FAM196AQ6ZSG2 479 aa12.72□□□□□ -0.37
CLIP1-206ENST00000535290 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.37
CLIP1-206ENST00000535290 ARHGEF10O15013 1369 aa12.71□□□□□ -0.37
CLIP1-206ENST00000535290 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
CLIP1-206ENST00000535290 NBPF8Q3BBV2 869 aa12.71□□□□□ -0.37
CLIP1-206ENST00000535290 NBPF14Q5TI25 921 aa12.71□□□□□ -0.37
CLIP1-206ENST00000535290 TECPR2O15040 1411 aa12.71□□□□□ -0.38
CLIP1-206ENST00000535290 C1QTNF8P60827 252 aa12.7□□□□□ -0.38
CLIP1-206ENST00000535290 TMEM132EQ6IEE7 984 aa12.7□□□□□ -0.38
CLIP1-206ENST00000535290 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
CLIP1-206ENST00000535290 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
CLIP1-206ENST00000535290 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
CLIP1-206ENST00000535290 KIF1AQ12756 1690 aa12.68□□□□□ -0.38
CLIP1-206ENST00000535290 ADGRB2O60241 1585 aa12.67□□□□□ -0.38
CLIP1-206ENST00000535290 THSD7AQ9UPZ6 1657 aa12.67□□□□□ -0.38
CLIP1-206ENST00000535290 NRXN1Q9ULB1 1477 aa12.66□□□□□ -0.38
CLIP1-206ENST00000535290 FMN2Q9NZ56 1722 aa12.66□□□□□ -0.38
CLIP1-206ENST00000535290 PMFBP1Q8TBY8 1022 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms