RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 SPRYD3Q8NCJ5 442 aa13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 TXLNAP40222 546 aa13.52□□□□□ -0.24
ZKSCAN1-205ENST00000535170 SASS6Q6UVJ0 657 aa13.52□□□□□ -0.24
ZKSCAN1-205ENST00000535170 OLFM4Q6UX06 510 aa13.52□□□□□ -0.24
ZKSCAN1-205ENST00000535170 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.24
ZKSCAN1-205ENST00000535170 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
ZKSCAN1-205ENST00000535170 RRP12Q5JTH9 1297 aaKnown RBP13.52□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.25
ZKSCAN1-205ENST00000535170 GNAI3P08754 354 aa13.52□□□□□ -0.25
ZKSCAN1-205ENST00000535170 LRRC9Q6ZRR7 1453 aa13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 ZRSR2Q15696 482 aaKnown RBP13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 ST20-MTHFSA0A0A6YYL1 179 aa13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 EPS15P42566 896 aa13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 MBD3O95983 291 aa13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 PNISRQ8TF01 805 aaKnown RBP13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 TRAK1Q9UPV9 953 aa13.51□□□□□ -0.25
ZKSCAN1-205ENST00000535170 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 TBC1D2BQ9UPU7 963 aa13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 HSP90B2PQ58FF3 399 aa13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CNTROBQ8N137 903 aa13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CREBRFQ8IUR6 639 aa13.5□□□□□ -0.25
ZKSCAN1-205ENST00000535170 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CT47A1Q5JQC4 288 aaPredicted RBP13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CAVIN1Q6NZI2 390 aaKnown RBP13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 NCAPD3P42695 1498 aa13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CWC22Q9HCG8 908 aaKnown RBP13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 APPP05067 770 aa13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 PCMTD1Q96MG8 357 aaPredicted RBP13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CCDC141Q6ZP82 1450 aa13.49□□□□□ -0.25
ZKSCAN1-205ENST00000535170 NFXL1Q6ZNB6 911 aa13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 SMARCE1Q969G3 411 aa13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CCDC30Q5VVM6 783 aa13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 ANO2Q9NQ90 1003 aa13.48□□□□□ -0.25
ZKSCAN1-205ENST00000535170 TRIM21P19474 475 aaKnown RBP13.47□□□□□ -0.25
ZKSCAN1-205ENST00000535170 FANCIQ9NVI1 1328 aa13.47□□□□□ -0.25
ZKSCAN1-205ENST00000535170 GSE1Q14687 1217 aa13.47□□□□□ -0.25
ZKSCAN1-205ENST00000535170 CC2D2AQ9P2K1 1620 aa13.47□□□□□ -0.25
ZKSCAN1-205ENST00000535170 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.25
ZKSCAN1-205ENST00000535170 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.252e-8■□□□□ 8.2
ZKSCAN1-205ENST00000535170 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
ZKSCAN1-205ENST00000535170 SRCIN1Q9C0H9 1055 aa13.46□□□□□ -0.25
ZKSCAN1-205ENST00000535170 ANKRD18AQ8IVF6 992 aa13.46□□□□□ -0.26
ZKSCAN1-205ENST00000535170 BICD2Q8TD16 824 aa13.46□□□□□ -0.26
ZKSCAN1-205ENST00000535170 DACH1Q9UI36 760 aa13.46□□□□□ -0.26
ZKSCAN1-205ENST00000535170 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 DESP17661 470 aa13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 ZSCAN25Q6NSZ9 544 aa13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CALRP27797 417 aaKnown RBP13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 RIPK4P57078 832 aa13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 ZNF396Q96N95 335 aaPredicted RBP13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
ZKSCAN1-205ENST00000535170 ITSN2Q9NZM3 1697 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 ERLIN2O94905 339 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 FILIP1LQ4L180 1135 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CCDC146Q8IYE0 955 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CDC45O75419 566 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CLUAP1Q96AJ1 413 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 KIF14Q15058 1648 aa13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
ZKSCAN1-205ENST00000535170 DNMBPQ6XZF7 1577 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 STIM1Q13586 685 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 UBTFL1P0CB47 393 aaPredicted RBP13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 PDE4AP27815 886 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 ANKRD30BQ9BXX2 1392 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 OFD1O75665 1012 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 IQCEQ6IPM2 695 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 PLEKHO1Q53GL0 409 aaPredicted RBP13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 HMGN5P82970 282 aaKnown RBP13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CCDC39Q9UFE4 941 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 NCOA2Q15596 1464 aa13.43□□□□□ -0.26
ZKSCAN1-205ENST00000535170 GCC1Q96CN9 775 aa13.42□□□□□ -0.26
ZKSCAN1-205ENST00000535170 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CDKL5O76039 1030 aa13.42□□□□□ -0.26
ZKSCAN1-205ENST00000535170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
ZKSCAN1-205ENST00000535170 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
ZKSCAN1-205ENST00000535170 EPRSP07814 1512 aaKnown RBP13.41□□□□□ -0.26
ZKSCAN1-205ENST00000535170 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms