RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 WAPLQ7Z5K2 1190 aa10.91□□□□□ -0.66
MRE11-205ENST00000535120 FNBP4Q8N3X1 1017 aaPredicted RBP10.91□□□□□ -0.66
MRE11-205ENST00000535120 NPHP3Q7Z494 1330 aa10.9□□□□□ -0.66
MRE11-205ENST00000535120 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
MRE11-205ENST00000535120 SRCAPQ6ZRS2 3230 aa10.9□□□□□ -0.67
MRE11-205ENST00000535120 LMOD2Q6P5Q4 547 aa10.89□□□□□ -0.67
MRE11-205ENST00000535120 GJD4Q96KN9 370 aaPredicted RBP10.89□□□□□ -0.67
MRE11-205ENST00000535120 CCDC9Q9Y3X0 531 aaKnown RBP10.89□□□□□ -0.67
MRE11-205ENST00000535120 ATRNO75882 1429 aa10.89□□□□□ -0.67
MRE11-205ENST00000535120 PTCH1Q13635 1447 aa10.89□□□□□ -0.67
MRE11-205ENST00000535120 TMEM132EQ6IEE7 984 aa10.88□□□□□ -0.67
MRE11-205ENST00000535120 RPGRIP1LQ68CZ1 1315 aa10.87□□□□□ -0.67
MRE11-205ENST00000535120 ADGRF5Q8IZF2 1346 aa10.87□□□□□ -0.67
MRE11-205ENST00000535120 HFM1A2PYH4 1435 aa10.87□□□□□ -0.67
MRE11-205ENST00000535120 A0A0G2JS52 829 aa10.87□□□□□ -0.67
MRE11-205ENST00000535120 MYT1Q01538 1121 aa10.87□□□□□ -0.67
MRE11-205ENST00000535120 NAIPQ13075 1403 aa10.86□□□□□ -0.67
MRE11-205ENST00000535120 DEFB132Q7Z7B7 95 aa10.86□□□□□ -0.67
MRE11-205ENST00000535120 BCL9LQ86UU0 1499 aa10.86□□□□□ -0.67
MRE11-205ENST00000535120 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
MRE11-205ENST00000535120 SAFB2Q14151 953 aaKnown RBP eCLIP10.85□□□□□ -0.67
MRE11-205ENST00000535120 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
MRE11-205ENST00000535120 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
MRE11-205ENST00000535120 KIF1BO60333 1816 aa10.85□□□□□ -0.67
MRE11-205ENST00000535120 LRPPRCP42704 1394 aaKnown RBP10.85□□□□□ -0.67
MRE11-205ENST00000535120 MYOM2P54296 1465 aa10.85□□□□□ -0.67
MRE11-205ENST00000535120 KRT28Q7Z3Y7 464 aa10.84□□□□□ -0.67
MRE11-205ENST00000535120 CCDC125Q86Z20 511 aa10.84□□□□□ -0.67
MRE11-205ENST00000535120 PLEKHH1Q9ULM0 1364 aa10.84□□□□□ -0.67
MRE11-205ENST00000535120 PXDNQ92626 1479 aa10.83□□□□□ -0.68
MRE11-205ENST00000535120 SEPT12Q8IYM1 358 aa10.83□□□□□ -0.68
MRE11-205ENST00000535120 SPATA31A3Q5VYP0 1347 aa10.82□□□□□ -0.68
MRE11-205ENST00000535120 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
MRE11-205ENST00000535120 PSME1Q06323 249 aa10.81□□□□□ -0.68
MRE11-205ENST00000535120 CCDC144AA2RUR9 1427 aa10.81□□□□□ -0.68
MRE11-205ENST00000535120 RRBP1Q9P2E9 1410 aaKnown RBP10.81□□□□□ -0.68
MRE11-205ENST00000535120 LAMC1P11047 1609 aa10.8□□□□□ -0.68
MRE11-205ENST00000535120 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
MRE11-205ENST00000535120 PHF8Q9UPP1 1060 aa10.8□□□□□ -0.68
MRE11-205ENST00000535120 CDC42BPGQ6DT37 1551 aa10.8□□□□□ -0.68
MRE11-205ENST00000535120 COL22A1Q8NFW1 1626 aaPredicted RBP10.8□□□□□ -0.68
MRE11-205ENST00000535120 BLMP54132 1417 aaPredicted RBP10.79□□□□□ -0.68
MRE11-205ENST00000535120 EP400Q96L91 3159 aa10.79□□□□□ -0.68
MRE11-205ENST00000535120 PMFBP1Q8TBY8 1022 aa10.79□□□□□ -0.68
MRE11-205ENST00000535120 KRT27Q7Z3Y8 459 aa10.78□□□□□ -0.68
MRE11-205ENST00000535120 MPHOSPH9Q99550 1183 aa10.78□□□□□ -0.68
MRE11-205ENST00000535120 POGKQ9P215 609 aa10.78□□□□□ -0.68
MRE11-205ENST00000535120 ABCC11Q96J66 1382 aa10.77□□□□□ -0.68
MRE11-205ENST00000535120 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.68
MRE11-205ENST00000535120 PRAG1Q86YV5 1406 aa10.77□□□□□ -0.68
MRE11-205ENST00000535120 VPS72Q15906 364 aa10.77□□□□□ -0.69
MRE11-205ENST00000535120 FAM98CQ17RN3 349 aaKnown RBP10.77□□□□□ -0.69
MRE11-205ENST00000535120 CFAP70Q5T0N1 1121 aa10.77□□□□□ -0.69
MRE11-205ENST00000535120 FAM182BQ5T319 152 aa10.77□□□□□ -0.69
MRE11-205ENST00000535120 PRAM1Q96QH2 718 aa10.77□□□□□ -0.69
MRE11-205ENST00000535120 PPLO60437 1756 aa10.77□□□□□ -0.69
MRE11-205ENST00000535120 YTHDC2Q9H6S0 1430 aaKnown RBP10.76□□□□□ -0.69
MRE11-205ENST00000535120 SLIT2O94813 1529 aa10.76□□□□□ -0.69
MRE11-205ENST00000535120 FAM83GA6ND36 823 aa10.76□□□□□ -0.69
MRE11-205ENST00000535120 HIRIP3Q9BW71 556 aaPredicted RBP10.76□□□□□ -0.69
MRE11-205ENST00000535120 GLI3P10071 1580 aa10.76□□□□□ -0.69
MRE11-205ENST00000535120 TNS3Q68CZ2 1445 aa10.75□□□□□ -0.69
MRE11-205ENST00000535120 BAG6P46379 1132 aa10.75□□□□□ -0.69
MRE11-205ENST00000535120 TECPR2O15040 1411 aa10.75□□□□□ -0.69
MRE11-205ENST00000535120 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
MRE11-205ENST00000535120 BTG4Q9NY30 223 aa10.74□□□□□ -0.69
MRE11-205ENST00000535120 DHX57Q6P158 1386 aaKnown RBP10.74□□□□□ -0.69
MRE11-205ENST00000535120 SPATA31E1Q6ZUB1 1445 aa10.74□□□□□ -0.69
MRE11-205ENST00000535120 EN1Q05925 392 aaPredicted RBP10.73□□□□□ -0.69
MRE11-205ENST00000535120 C14orf93Q9H972 538 aaKnown RBP10.73□□□□□ -0.69
MRE11-205ENST00000535120 TRAK1Q9UPV9 953 aa10.73□□□□□ -0.69
MRE11-205ENST00000535120 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
MRE11-205ENST00000535120 PIK3C2GO75747 1445 aa10.73□□□□□ -0.69
MRE11-205ENST00000535120 USP32Q8NFA0 1604 aa10.73□□□□□ -0.69
MRE11-205ENST00000535120 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
MRE11-205ENST00000535120 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
MRE11-205ENST00000535120 ARHGEF10O15013 1369 aa10.72□□□□□ -0.69
MRE11-205ENST00000535120 SBNO1A3KN83 1393 aa10.71□□□□□ -0.69
MRE11-205ENST00000535120 HRCP23327 699 aa10.71□□□□□ -0.69
MRE11-205ENST00000535120 R3HDM1Q15032 1099 aaKnown RBP10.71□□□□□ -0.69
MRE11-205ENST00000535120 NGDNQ8NEJ9 315 aaKnown RBP10.71□□□□□ -0.69
MRE11-205ENST00000535120 FMN2Q9NZ56 1722 aa10.71□□□□□ -0.69
MRE11-205ENST00000535120 KIF1AQ12756 1690 aa10.7□□□□□ -0.7
MRE11-205ENST00000535120 GPRASP1Q5JY77 1395 aa10.7□□□□□ -0.7
MRE11-205ENST00000535120 ONECUT3O60422 494 aaPredicted RBP10.7□□□□□ -0.7
MRE11-205ENST00000535120 SIRT1Q96EB6 747 aa10.7□□□□□ -0.7
MRE11-205ENST00000535120 STRN4Q9NRL3 753 aa10.7□□□□□ -0.7
MRE11-205ENST00000535120 BRWD3Q6RI45 1802 aa10.7□□□□□ -0.7
MRE11-205ENST00000535120 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.7□□□□□ -0.7
MRE11-205ENST00000535120 CHRNA2Q15822 529 aa10.69□□□□□ -0.7
MRE11-205ENST00000535120 NUTM2GQ5VZR2 741 aa10.69□□□□□ -0.7
MRE11-205ENST00000535120 PRDM11Q9NQV5 511 aa10.69□□□□□ -0.7
MRE11-205ENST00000535120 USP35Q9P2H5 1018 aa10.69□□□□□ -0.7
MRE11-205ENST00000535120 NRXN1Q9ULB1 1477 aa10.68□□□□□ -0.7
MRE11-205ENST00000535120 RGPD8O14715 1765 aaPredicted RBP10.67□□□□□ -0.7
MRE11-205ENST00000535120 ACIN1Q9UKV3 1341 aaKnown RBP10.67□□□□□ -0.7
MRE11-205ENST00000535120 TRIM37O94972 964 aa10.67□□□□□ -0.7
MRE11-205ENST00000535120 EZH2Q15910 746 aaKnown RBP10.67□□□□□ -0.7
MRE11-205ENST00000535120 KNDC1Q76NI1 1749 aa10.67□□□□□ -0.7
MRE11-205ENST00000535120 PLCH1Q4KWH8 1693 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms